EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000014307 (Gene tree)
Gene ID: 104865228
Gene Symbol: RPUSD4
Alias: FLJ14494
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 8647 bases
Position: chrKN122286.1:1978990-1987636
Accession: 104865228
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000005240	PseudoU_synth_2	PF00849.22	9.1e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000018702	RPUSD4-201	2431	XM_010628651	ENSFDAP00000005240	373 (aa)	XP_010626953	A0A091E893

Gene Model

Click here to download ENSFDAG00000014307's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000014307's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000014307	RPUSD4	68	32.482	ENSFDAG00000008350	RPUSD3	86	31.973

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000014307	RPUSD4	100	81.842	ENSG00000165526	RPUSD4	100	81.842	Homo_sapiens
ENSFDAG00000014307	RPUSD4	94	50.000	ENSAPOG00000011024	rpusd4	89	50.000	Acanthochromis_polyacanthus
ENSFDAG00000014307	RPUSD4	98	82.749	ENSAMEG00000000127	-	98	82.749	Ailuropoda_melanoleuca
ENSFDAG00000014307	RPUSD4	61	86.290	ENSAMEG00000005953	-	97	86.290	Ailuropoda_melanoleuca
ENSFDAG00000014307	RPUSD4	86	50.000	ENSACIG00000003533	rpusd4	95	50.000	Amphilophus_citrinellus
ENSFDAG00000014307	RPUSD4	97	50.000	ENSAOCG00000015409	rpusd4	90	50.000	Amphiprion_ocellaris
ENSFDAG00000014307	RPUSD4	97	50.000	ENSAPEG00000018935	rpusd4	90	50.000	Amphiprion_percula
ENSFDAG00000014307	RPUSD4	90	48.991	ENSATEG00000008059	rpusd4	86	48.991	Anabas_testudineus
ENSFDAG00000014307	RPUSD4	74	59.498	ENSAPLG00000013250	RPUSD4	99	58.305	Anas_platyrhynchos
ENSFDAG00000014307	RPUSD4	97	59.783	ENSACAG00000000189	RPUSD4	100	59.783	Anolis_carolinensis
ENSFDAG00000014307	RPUSD4	99	81.452	ENSANAG00000024050	RPUSD4	100	81.452	Aotus_nancymaae
ENSFDAG00000014307	RPUSD4	94	49.718	ENSACLG00000020996	rpusd4	90	49.718	Astatotilapia_calliptera
ENSFDAG00000014307	RPUSD4	91	50.289	ENSAMXG00000031479	rpusd4	95	51.039	Astyanax_mexicanus
ENSFDAG00000014307	RPUSD4	100	77.249	ENSBTAG00000020900	RPUSD4	100	77.249	Bos_taurus
ENSFDAG00000014307	RPUSD4	98	81.622	ENSCJAG00000042850	RPUSD4	93	81.622	Callithrix_jacchus
ENSFDAG00000014307	RPUSD4	98	81.989	ENSCAFG00000010488	RPUSD4	98	81.989	Canis_familiaris
ENSFDAG00000014307	RPUSD4	98	81.989	ENSCAFG00020010621	RPUSD4	98	81.989	Canis_lupus_dingo
ENSFDAG00000014307	RPUSD4	100	78.100	ENSCHIG00000009975	RPUSD4	100	78.100	Capra_hircus
ENSFDAG00000014307	RPUSD4	100	83.820	ENSTSYG00000008456	RPUSD4	100	83.820	Carlito_syrichta
ENSFDAG00000014307	RPUSD4	69	84.109	ENSCAPG00000006040	RPUSD4	100	84.109	Cavia_aperea
ENSFDAG00000014307	RPUSD4	100	85.676	ENSCPOG00000014971	RPUSD4	100	85.676	Cavia_porcellus
ENSFDAG00000014307	RPUSD4	99	81.720	ENSCCAG00000027838	RPUSD4	100	81.720	Cebus_capucinus
ENSFDAG00000014307	RPUSD4	100	82.228	ENSCATG00000041570	RPUSD4	100	82.228	Cercocebus_atys
ENSFDAG00000014307	RPUSD4	100	88.329	ENSCLAG00000016553	RPUSD4	100	88.329	Chinchilla_lanigera
ENSFDAG00000014307	RPUSD4	100	81.167	ENSCSAG00000002274	RPUSD4	100	81.167	Chlorocebus_sabaeus
ENSFDAG00000014307	RPUSD4	76	82.332	ENSCHOG00000010249	RPUSD4	100	82.332	Choloepus_hoffmanni
ENSFDAG00000014307	RPUSD4	77	65.744	ENSCPBG00000011175	RPUSD4	99	65.744	Chrysemys_picta_bellii
ENSFDAG00000014307	RPUSD4	76	42.466	ENSCSAVG00000000872	-	57	42.466	Ciona_savignyi
ENSFDAG00000014307	RPUSD4	100	80.106	ENSCANG00000039684	RPUSD4	100	80.106	Colobus_angolensis_palliatus
ENSFDAG00000014307	RPUSD4	100	83.554	ENSCGRG00001024141	Rpusd4	100	83.554	Cricetulus_griseus_chok1gshd
ENSFDAG00000014307	RPUSD4	100	83.554	ENSCGRG00000014415	Rpusd4	100	83.554	Cricetulus_griseus_crigri
ENSFDAG00000014307	RPUSD4	51	43.590	ENSCSEG00000006462	-	85	43.590	Cynoglossus_semilaevis
ENSFDAG00000014307	RPUSD4	89	50.000	ENSCVAG00000008761	rpusd4	86	50.000	Cyprinodon_variegatus
ENSFDAG00000014307	RPUSD4	89	50.296	ENSCVAG00000000392	rpusd4	95	50.296	Cyprinodon_variegatus
ENSFDAG00000014307	RPUSD4	86	49.846	ENSDARG00000012674	rpusd4	91	49.846	Danio_rerio
ENSFDAG00000014307	RPUSD4	100	77.984	ENSDNOG00000020026	RPUSD4	100	77.984	Dasypus_novemcinctus
ENSFDAG00000014307	RPUSD4	100	81.167	ENSDORG00000016717	Rpusd4	100	81.167	Dipodomys_ordii
ENSFDAG00000014307	RPUSD4	98	79.292	ENSETEG00000013953	RPUSD4	98	79.292	Echinops_telfairi
ENSFDAG00000014307	RPUSD4	100	82.759	ENSEASG00005022982	RPUSD4	100	82.759	Equus_asinus_asinus
ENSFDAG00000014307	RPUSD4	100	82.493	ENSECAG00000000557	RPUSD4	100	82.493	Equus_caballus
ENSFDAG00000014307	RPUSD4	82	78.421	ENSEEUG00000014036	RPUSD4	82	78.421	Erinaceus_europaeus
ENSFDAG00000014307	RPUSD4	97	50.535	ENSELUG00000008075	rpusd4	98	50.535	Esox_lucius
ENSFDAG00000014307	RPUSD4	98	80.593	ENSFCAG00000029789	RPUSD4	98	80.593	Felis_catus
ENSFDAG00000014307	RPUSD4	89	57.357	ENSFALG00000005171	RPUSD4	98	57.357	Ficedula_albicollis
ENSFDAG00000014307	RPUSD4	95	48.429	ENSFHEG00000004329	rpusd4	98	48.429	Fundulus_heteroclitus
ENSFDAG00000014307	RPUSD4	86	49.693	ENSGMOG00000017726	rpusd4	96	49.693	Gadus_morhua
ENSFDAG00000014307	RPUSD4	75	61.702	ENSGALG00000024326	RPUSD4	95	56.725	Gallus_gallus
ENSFDAG00000014307	RPUSD4	96	46.594	ENSGAFG00000021559	rpusd4	92	46.594	Gambusia_affinis
ENSFDAG00000014307	RPUSD4	90	48.235	ENSGACG00000001657	rpusd4	100	48.235	Gasterosteus_aculeatus
ENSFDAG00000014307	RPUSD4	94	61.756	ENSGAGG00000000132	RPUSD4	97	61.756	Gopherus_agassizii
ENSFDAG00000014307	RPUSD4	100	81.579	ENSGGOG00000016494	RPUSD4	100	81.579	Gorilla_gorilla
ENSFDAG00000014307	RPUSD4	95	49.167	ENSHBUG00000022838	rpusd4	92	49.167	Haplochromis_burtoni
ENSFDAG00000014307	RPUSD4	100	89.125	ENSHGLG00000002285	RPUSD4	100	89.125	Heterocephalus_glaber_female
ENSFDAG00000014307	RPUSD4	100	89.125	ENSHGLG00100006385	RPUSD4	100	89.125	Heterocephalus_glaber_male
ENSFDAG00000014307	RPUSD4	87	51.818	ENSHCOG00000006612	rpusd4	84	51.818	Hippocampus_comes
ENSFDAG00000014307	RPUSD4	92	52.722	ENSIPUG00000023879	rusd4	90	52.722	Ictalurus_punctatus
ENSFDAG00000014307	RPUSD4	97	84.066	ENSSTOG00000025280	RPUSD4	100	84.066	Ictidomys_tridecemlineatus
ENSFDAG00000014307	RPUSD4	94	85.470	ENSJJAG00000018673	Rpusd4	94	85.470	Jaculus_jaculus
ENSFDAG00000014307	RPUSD4	90	51.765	ENSKMAG00000021805	rpusd4	88	51.765	Kryptolebias_marmoratus
ENSFDAG00000014307	RPUSD4	87	52.121	ENSLBEG00000020394	rpusd4	92	52.121	Labrus_bergylta
ENSFDAG00000014307	RPUSD4	86	60.802	ENSLACG00000011028	RPUSD4	85	59.644	Latimeria_chalumnae
ENSFDAG00000014307	RPUSD4	86	48.765	ENSLOCG00000003124	rpusd4	86	48.765	Lepisosteus_oculatus
ENSFDAG00000014307	RPUSD4	100	81.698	ENSLAFG00000005211	RPUSD4	100	81.698	Loxodonta_africana
ENSFDAG00000014307	RPUSD4	100	82.493	ENSMFAG00000039513	RPUSD4	100	82.493	Macaca_fascicularis
ENSFDAG00000014307	RPUSD4	100	82.228	ENSMMUG00000007933	RPUSD4	100	82.228	Macaca_mulatta
ENSFDAG00000014307	RPUSD4	100	82.228	ENSMNEG00000027414	RPUSD4	100	82.228	Macaca_nemestrina
ENSFDAG00000014307	RPUSD4	100	82.228	ENSMLEG00000042461	RPUSD4	100	82.228	Mandrillus_leucophaeus
ENSFDAG00000014307	RPUSD4	94	47.619	ENSMAMG00000023839	rpusd4	92	47.619	Mastacembelus_armatus
ENSFDAG00000014307	RPUSD4	95	49.167	ENSMZEG00005011999	rpusd4	92	49.167	Maylandia_zebra
ENSFDAG00000014307	RPUSD4	75	60.357	ENSMGAG00000000840	RPUSD4	99	57.716	Meleagris_gallopavo
ENSFDAG00000014307	RPUSD4	100	79.947	ENSMAUG00000010280	Rpusd4	100	79.947	Mesocricetus_auratus
ENSFDAG00000014307	RPUSD4	100	83.024	ENSMICG00000015979	RPUSD4	100	83.024	Microcebus_murinus
ENSFDAG00000014307	RPUSD4	99	77.719	ENSMOCG00000000661	Rpusd4	99	77.719	Microtus_ochrogaster
ENSFDAG00000014307	RPUSD4	84	52.516	ENSMMOG00000021731	rpusd4	94	52.516	Mola_mola
ENSFDAG00000014307	RPUSD4	87	76.235	ENSMODG00000004521	RPUSD4	83	76.235	Monodelphis_domestica
ENSFDAG00000014307	RPUSD4	81	52.273	ENSMALG00000005839	rpusd4	98	50.765	Monopterus_albus
ENSFDAG00000014307	RPUSD4	100	80.106	MGP_CAROLIEiJ_G0031954	Rpusd4	100	80.106	Mus_caroli
ENSFDAG00000014307	RPUSD4	99	80.645	ENSMUSG00000032044	Rpusd4	99	80.645	Mus_musculus
ENSFDAG00000014307	RPUSD4	100	80.902	MGP_PahariEiJ_G0014819	Rpusd4	100	80.902	Mus_pahari
ENSFDAG00000014307	RPUSD4	99	80.914	MGP_SPRETEiJ_G0033078	Rpusd4	99	80.914	Mus_spretus
ENSFDAG00000014307	RPUSD4	98	80.054	ENSMPUG00000006608	RPUSD4	99	80.054	Mustela_putorius_furo
ENSFDAG00000014307	RPUSD4	68	83.465	ENSMLUG00000029348	-	100	83.465	Myotis_lucifugus
ENSFDAG00000014307	RPUSD4	92	83.090	ENSMLUG00000017328	-	97	79.891	Myotis_lucifugus
ENSFDAG00000014307	RPUSD4	98	81.989	ENSNGAG00000020847	Rpusd4	98	81.989	Nannospalax_galili
ENSFDAG00000014307	RPUSD4	87	51.976	ENSNBRG00000005207	rpusd4	95	51.976	Neolamprologus_brichardi
ENSFDAG00000014307	RPUSD4	100	82.759	ENSNLEG00000007465	RPUSD4	100	82.759	Nomascus_leucogenys
ENSFDAG00000014307	RPUSD4	93	71.470	ENSMEUG00000004370	RPUSD4	94	71.470	Notamacropus_eugenii
ENSFDAG00000014307	RPUSD4	70	60.000	ENSOPRG00000013141	-	100	60.000	Ochotona_princeps
ENSFDAG00000014307	RPUSD4	100	86.207	ENSODEG00000004577	RPUSD4	100	86.207	Octodon_degus
ENSFDAG00000014307	RPUSD4	96	49.724	ENSONIG00000018879	rpusd4	92	51.603	Oreochromis_niloticus
ENSFDAG00000014307	RPUSD4	78	67.119	ENSOANG00000007247	RPUSD4	95	67.003	Ornithorhynchus_anatinus
ENSFDAG00000014307	RPUSD4	99	82.493	ENSOCUG00000017039	RPUSD4	99	82.493	Oryctolagus_cuniculus
ENSFDAG00000014307	RPUSD4	92	48.127	ENSORLG00000002750	rpusd4	95	48.127	Oryzias_latipes
ENSFDAG00000014307	RPUSD4	88	49.701	ENSORLG00020002044	rpusd4	83	49.701	Oryzias_latipes_hni
ENSFDAG00000014307	RPUSD4	95	46.978	ENSORLG00015020034	rpusd4	83	49.552	Oryzias_latipes_hsok
ENSFDAG00000014307	RPUSD4	90	50.877	ENSOMEG00000004861	rpusd4	84	50.877	Oryzias_melastigma
ENSFDAG00000014307	RPUSD4	100	80.688	ENSOGAG00000008922	RPUSD4	100	80.688	Otolemur_garnettii
ENSFDAG00000014307	RPUSD4	97	79.063	ENSOARG00000012238	RPUSD4	99	77.513	Ovis_aries
ENSFDAG00000014307	RPUSD4	100	82.105	ENSPPAG00000042883	RPUSD4	93	82.105	Pan_paniscus
ENSFDAG00000014307	RPUSD4	98	80.863	ENSPPRG00000003081	RPUSD4	98	80.863	Panthera_pardus
ENSFDAG00000014307	RPUSD4	98	80.863	ENSPTIG00000012059	RPUSD4	98	80.863	Panthera_tigris_altaica
ENSFDAG00000014307	RPUSD4	100	81.842	ENSPTRG00000004454	RPUSD4	100	81.842	Pan_troglodytes
ENSFDAG00000014307	RPUSD4	100	82.493	ENSPANG00000015040	RPUSD4	100	82.493	Papio_anubis
ENSFDAG00000014307	RPUSD4	95	55.525	ENSPKIG00000023986	rpusd4	92	55.525	Paramormyrops_kingsleyae
ENSFDAG00000014307	RPUSD4	80	65.333	ENSPSIG00000014268	RPUSD4	95	65.333	Pelodiscus_sinensis
ENSFDAG00000014307	RPUSD4	93	47.887	ENSPMGG00000002806	rpusd4	93	47.887	Periophthalmus_magnuspinnatus
ENSFDAG00000014307	RPUSD4	100	72.944	ENSPEMG00000000278	Rpusd4	100	72.944	Peromyscus_maniculatus_bairdii
ENSFDAG00000014307	RPUSD4	83	44.898	ENSPMAG00000008183	rpusd4	99	44.898	Petromyzon_marinus
ENSFDAG00000014307	RPUSD4	91	74.412	ENSPCIG00000010212	RPUSD4	93	74.412	Phascolarctos_cinereus
ENSFDAG00000014307	RPUSD4	95	48.098	ENSPFOG00000019030	rpusd4	96	48.098	Poecilia_formosa
ENSFDAG00000014307	RPUSD4	95	48.634	ENSPLAG00000016848	rpusd4	93	48.634	Poecilia_latipinna
ENSFDAG00000014307	RPUSD4	95	47.541	ENSPMEG00000017534	rpusd4	93	47.541	Poecilia_mexicana
ENSFDAG00000014307	RPUSD4	92	48.864	ENSPREG00000005689	rpusd4	90	48.864	Poecilia_reticulata
ENSFDAG00000014307	RPUSD4	100	82.105	ENSPPYG00000004043	RPUSD4	100	82.105	Pongo_abelii
ENSFDAG00000014307	RPUSD4	80	78.261	ENSPCAG00000000753	RPUSD4	81	78.261	Procavia_capensis
ENSFDAG00000014307	RPUSD4	98	76.819	ENSPCOG00000020694	RPUSD4	100	76.819	Propithecus_coquereli
ENSFDAG00000014307	RPUSD4	97	82.289	ENSPVAG00000000988	RPUSD4	98	82.289	Pteropus_vampyrus
ENSFDAG00000014307	RPUSD4	95	48.889	ENSPNYG00000009652	rpusd4	92	48.889	Pundamilia_nyererei
ENSFDAG00000014307	RPUSD4	89	51.497	ENSPNAG00000012264	rpusd4	88	51.497	Pygocentrus_nattereri
ENSFDAG00000014307	RPUSD4	99	81.720	ENSRNOG00000011567	Rpusd4	99	81.720	Rattus_norvegicus
ENSFDAG00000014307	RPUSD4	100	81.432	ENSRBIG00000034842	RPUSD4	100	81.432	Rhinopithecus_bieti
ENSFDAG00000014307	RPUSD4	100	81.432	ENSRROG00000039753	RPUSD4	100	81.432	Rhinopithecus_roxellana
ENSFDAG00000014307	RPUSD4	99	80.645	ENSSBOG00000030413	RPUSD4	100	80.645	Saimiri_boliviensis_boliviensis
ENSFDAG00000014307	RPUSD4	81	74.751	ENSSHAG00000008304	RPUSD4	99	74.751	Sarcophilus_harrisii
ENSFDAG00000014307	RPUSD4	96	53.719	ENSSFOG00015006203	rpusd4	98	53.719	Scleropages_formosus
ENSFDAG00000014307	RPUSD4	95	49.030	ENSSMAG00000020978	rpusd4	92	49.030	Scophthalmus_maximus
ENSFDAG00000014307	RPUSD4	89	48.961	ENSSDUG00000013399	rpusd4	88	48.961	Seriola_dumerili
ENSFDAG00000014307	RPUSD4	89	48.961	ENSSLDG00000023507	rpusd4	88	48.961	Seriola_lalandi_dorsalis
ENSFDAG00000014307	RPUSD4	90	60.882	ENSSPUG00000001401	RPUSD4	92	63.393	Sphenodon_punctatus
ENSFDAG00000014307	RPUSD4	96	50.275	ENSSPAG00000012163	rpusd4	93	50.275	Stegastes_partitus
ENSFDAG00000014307	RPUSD4	100	82.759	ENSSSCG00000015233	RPUSD4	100	82.759	Sus_scrofa
ENSFDAG00000014307	RPUSD4	80	60.000	ENSTGUG00000000773	RPUSD4	100	60.000	Taeniopygia_guttata
ENSFDAG00000014307	RPUSD4	87	50.303	ENSTRUG00000012283	rpusd4	84	50.303	Takifugu_rubripes
ENSFDAG00000014307	RPUSD4	92	48.718	ENSTNIG00000014676	rpusd4	88	48.718	Tetraodon_nigroviridis
ENSFDAG00000014307	RPUSD4	100	79.576	ENSTTRG00000001555	RPUSD4	100	79.576	Tursiops_truncatus
ENSFDAG00000014307	RPUSD4	98	82.749	ENSUMAG00000002219	RPUSD4	98	82.749	Ursus_maritimus
ENSFDAG00000014307	RPUSD4	70	83.774	ENSVPAG00000001066	RPUSD4	100	83.774	Vicugna_pacos
ENSFDAG00000014307	RPUSD4	98	81.720	ENSVVUG00000020101	RPUSD4	98	81.720	Vulpes_vulpes
ENSFDAG00000014307	RPUSD4	96	48.229	ENSXCOG00000004676	rpusd4	92	48.229	Xiphophorus_couchianus
ENSFDAG00000014307	RPUSD4	89	49.708	ENSXMAG00000023351	rpusd4	87	49.708	Xiphophorus_maculatus