EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000014663 (Gene tree)
Gene ID: -
Gene Symbol: RBM12
Alias: HRIHFB2091|KIAA0765|SWAN
Full Name: RNA binding motif protein 12
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 2910 bases
Position: chrKN123158.1:979255-982164
Accession: 9898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000005737	RRM_1	PF00076.22	1.5e-30	1	3
ENSFDAP00000005737	RRM_1	PF00076.22	1.5e-30	2	3
ENSFDAP00000005737	RRM_1	PF00076.22	1.5e-30	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000019137	RBM12-201	2784	-	ENSFDAP00000005737	927 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000014663's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000014663's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000014663	RBM12	60	70.115	ENSFDAG00000005576	RBM12B	55	70.115

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000014663	RBM12	100	93.562	ENSG00000244462	RBM12	100	97.761	Homo_sapiens
ENSFDAG00000014663	RBM12	100	95.901	ENSAMEG00000019189	RBM12	100	95.901	Ailuropoda_melanoleuca
ENSFDAG00000014663	RBM12	100	77.278	ENSACAG00000006330	RBM12	98	76.956	Anolis_carolinensis
ENSFDAG00000014663	RBM12	100	93.985	ENSANAG00000032596	RBM12	98	94.415	Aotus_nancymaae
ENSFDAG00000014663	RBM12	100	92.453	ENSBTAG00000044015	RBM12	100	92.453	Bos_taurus
ENSFDAG00000014663	RBM12	100	95.901	ENSCAFG00000008256	RBM12	98	95.901	Canis_familiaris
ENSFDAG00000014663	RBM12	100	95.469	ENSCAFG00020005650	RBM12	100	95.469	Canis_lupus_dingo
ENSFDAG00000014663	RBM12	100	94.606	ENSCHIG00000024592	RBM12	100	94.606	Capra_hircus
ENSFDAG00000014663	RBM12	100	94.067	ENSTSYG00000030563	RBM12	98	93.635	Carlito_syrichta
ENSFDAG00000014663	RBM12	84	88.757	ENSCAPG00000006176	RBM12	81	93.390	Cavia_aperea
ENSFDAG00000014663	RBM12	100	89.880	ENSCPOG00000035170	RBM12	100	93.390	Cavia_porcellus
ENSFDAG00000014663	RBM12	96	92.463	ENSCCAG00000036056	-	98	92.013	Cebus_capucinus
ENSFDAG00000014663	RBM12	93	90.526	ENSCCAG00000035899	-	100	67.663	Cebus_capucinus
ENSFDAG00000014663	RBM12	100	93.562	ENSCATG00000030934	RBM12	98	93.991	Cercocebus_atys
ENSFDAG00000014663	RBM12	100	95.494	ENSCLAG00000017230	RBM12	100	95.064	Chinchilla_lanigera
ENSFDAG00000014663	RBM12	100	93.348	ENSCANG00000030552	RBM12	98	93.777	Colobus_angolensis_palliatus
ENSFDAG00000014663	RBM12	100	87.399	ENSCGRG00001021144	Rbm12	100	86.694	Cricetulus_griseus_chok1gshd
ENSFDAG00000014663	RBM12	100	87.399	ENSCGRG00000012719	Rbm12	100	86.694	Cricetulus_griseus_crigri
ENSFDAG00000014663	RBM12	75	85.915	ENSDORG00000000606	-	100	82.525	Dipodomys_ordii
ENSFDAG00000014663	RBM12	100	94.319	ENSDORG00000028509	-	100	94.427	Dipodomys_ordii
ENSFDAG00000014663	RBM12	57	66.412	ENSEBUG00000016806	rbm12	89	60.131	Eptatretus_burgeri
ENSFDAG00000014663	RBM12	100	95.156	ENSECAG00000021997	RBM12	100	95.156	Equus_caballus
ENSFDAG00000014663	RBM12	56	96.774	ENSEEUG00000008858	-	56	96.774	Erinaceus_europaeus
ENSFDAG00000014663	RBM12	100	79.310	ENSGALG00000030253	RBM12	100	79.634	Gallus_gallus
ENSFDAG00000014663	RBM12	100	93.562	ENSGGOG00000028500	RBM12	98	93.991	Gorilla_gorilla
ENSFDAG00000014663	RBM12	100	98.062	ENSHGLG00000013208	RBM12	100	98.062	Heterocephalus_glaber_female
ENSFDAG00000014663	RBM12	90	99.216	ENSHGLG00100019158	RBM12	90	99.216	Heterocephalus_glaber_male
ENSFDAG00000014663	RBM12	100	52.991	ENSIPUG00000014491	rbm12	92	68.783	Ictalurus_punctatus
ENSFDAG00000014663	RBM12	100	91.675	ENSSTOG00000019739	RBM12	100	91.359	Ictidomys_tridecemlineatus
ENSFDAG00000014663	RBM12	100	94.510	ENSLAFG00000010341	RBM12	100	94.510	Loxodonta_africana
ENSFDAG00000014663	RBM12	100	93.777	ENSMFAG00000032583	RBM12	98	94.206	Macaca_fascicularis
ENSFDAG00000014663	RBM12	100	93.670	ENSMMUG00000020960	CPNE1	100	94.099	Macaca_mulatta
ENSFDAG00000014663	RBM12	100	93.670	ENSMNEG00000045365	RBM12	98	94.099	Macaca_nemestrina
ENSFDAG00000014663	RBM12	100	93.670	ENSMLEG00000032492	RBM12	98	94.099	Mandrillus_leucophaeus
ENSFDAG00000014663	RBM12	100	78.556	ENSMGAG00000001502	RBM12	100	79.913	Meleagris_gallopavo
ENSFDAG00000014663	RBM12	100	87.802	ENSMAUG00000012800	Rbm12	100	86.694	Mesocricetus_auratus
ENSFDAG00000014663	RBM12	100	93.420	ENSMICG00000032761	-	98	93.851	Microcebus_murinus
ENSFDAG00000014663	RBM12	75	85.612	ENSMICG00000029540	-	74	84.348	Microcebus_murinus
ENSFDAG00000014663	RBM12	100	79.719	ENSMOCG00000012950	Rbm12	100	85.456	Microtus_ochrogaster
ENSFDAG00000014663	RBM12	100	85.868	ENSMODG00000001591	RBM12	98	85.653	Monodelphis_domestica
ENSFDAG00000014663	RBM12	100	77.789	MGP_CAROLIEiJ_G0024551	Rbm12	99	92.493	Mus_caroli
ENSFDAG00000014663	RBM12	100	86.318	ENSMUSG00000089824	Rbm12	100	92.725	Mus_musculus
ENSFDAG00000014663	RBM12	100	77.800	MGP_PahariEiJ_G0025996	Rbm12	100	92.918	Mus_pahari
ENSFDAG00000014663	RBM12	73	94.265	MGP_SPRETEiJ_G0025473	Rbm12	99	93.153	Mus_spretus
ENSFDAG00000014663	RBM12	100	95.361	ENSMPUG00000017789	-	100	95.361	Mustela_putorius_furo
ENSFDAG00000014663	RBM12	100	94.618	ENSMLUG00000011217	RBM12	98	94.618	Myotis_lucifugus
ENSFDAG00000014663	RBM12	100	87.827	ENSNGAG00000015846	Rbm12	71	93.343	Nannospalax_galili
ENSFDAG00000014663	RBM12	100	93.670	ENSNLEG00000010268	RBM12	98	94.099	Nomascus_leucogenys
ENSFDAG00000014663	RBM12	100	85.437	ENSMEUG00000007621	RBM12	73	82.464	Notamacropus_eugenii
ENSFDAG00000014663	RBM12	100	92.119	ENSOPRG00000005687	RBM12	100	92.119	Ochotona_princeps
ENSFDAG00000014663	RBM12	100	88.687	ENSODEG00000013870	RBM12	100	89.602	Octodon_degus
ENSFDAG00000014663	RBM12	100	93.562	ENSPPAG00000040719	RBM12	98	93.991	Pan_paniscus
ENSFDAG00000014663	RBM12	100	93.562	ENSPTRG00000040708	-	98	93.991	Pan_troglodytes
ENSFDAG00000014663	RBM12	100	93.562	ENSPTRG00000013446	RBM12	98	93.991	Pan_troglodytes
ENSFDAG00000014663	RBM12	100	93.670	ENSPANG00000020003	CPNE1	98	94.099	Papio_anubis
ENSFDAG00000014663	RBM12	89	86.769	ENSPSIG00000007369	RBM12	98	86.615	Pelodiscus_sinensis
ENSFDAG00000014663	RBM12	100	79.661	ENSPEMG00000017769	Rbm12	100	93.866	Peromyscus_maniculatus_bairdii
ENSFDAG00000014663	RBM12	60	79.365	ENSPFOG00000023551	rbm12	98	78.873	Poecilia_formosa
ENSFDAG00000014663	RBM12	100	93.576	ENSPPYG00000010960	RBM12	100	93.576	Pongo_abelii
ENSFDAG00000014663	RBM12	100	92.896	ENSPCAG00000008653	RBM12	100	92.357	Procavia_capensis
ENSFDAG00000014663	RBM12	100	94.403	ENSPCOG00000023724	RBM12	98	94.833	Propithecus_coquereli
ENSFDAG00000014663	RBM12	100	94.080	ENSPVAG00000014937	RBM12	100	94.726	Pteropus_vampyrus
ENSFDAG00000014663	RBM12	100	92.725	ENSRNOG00000019723	Rbm12	97	92.725	Rattus_norvegicus
ENSFDAG00000014663	RBM12	100	92.725	ENSRNOG00000049913	LOC100910990	97	92.725	Rattus_norvegicus
ENSFDAG00000014663	RBM12	100	93.562	ENSRBIG00000042965	RBM12	98	93.991	Rhinopithecus_bieti
ENSFDAG00000014663	RBM12	100	93.562	ENSRROG00000037485	RBM12	98	93.991	Rhinopithecus_roxellana
ENSFDAG00000014663	RBM12	100	93.770	ENSSBOG00000027633	RBM12	98	94.200	Saimiri_boliviensis_boliviensis
ENSFDAG00000014663	RBM12	100	86.084	ENSSHAG00000018585	RBM12	100	85.868	Sarcophilus_harrisii
ENSFDAG00000014663	RBM12	100	95.396	ENSSSCG00000036156	RBM12	100	95.396	Sus_scrofa
ENSFDAG00000014663	RBM12	100	80.583	ENSTGUG00000003002	RBM12	100	79.935	Taeniopygia_guttata
ENSFDAG00000014663	RBM12	100	95.156	ENSTTRG00000017035	RBM12	100	95.156	Tursiops_truncatus
ENSFDAG00000014663	RBM12	100	94.652	ENSUAMG00000010430	RBM12	100	95.587	Ursus_americanus
ENSFDAG00000014663	RBM12	88	96.429	ENSVPAG00000003812	RBM12	88	96.429	Vicugna_pacos
ENSFDAG00000014663	RBM12	100	59.428	ENSXETG00000033541	RBM12	100	59.769	Xenopus_tropicalis