EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000014929 (Gene tree)
Gene ID: -
Gene Symbol: ZIC3
Alias: HTX|HTX1|ZNF203
Full Name: Zic family member 3
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 5186 bases
Position: chrKN123195.1:2158904-2164089
Accession: 104873714
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000006085	zf-C2H2	PF00096.26	3.8e-23	1	4
ENSFDAP00000006085	zf-C2H2	PF00096.26	3.8e-23	2	4
ENSFDAP00000006085	zf-C2H2	PF00096.26	3.8e-23	3	4
ENSFDAP00000006085	zf-C2H2	PF00096.26	3.8e-23	4	4
ENSFDAP00000006081	zf-C2H2	PF00096.26	5.1e-22	1	4
ENSFDAP00000006081	zf-C2H2	PF00096.26	5.1e-22	2	4
ENSFDAP00000006081	zf-C2H2	PF00096.26	5.1e-22	3	4
ENSFDAP00000006081	zf-C2H2	PF00096.26	5.1e-22	4	4
ENSFDAP00000006085	zf-met	PF12874.7	3.5e-05	1	1
ENSFDAP00000006081	zf-met	PF12874.7	0.0003	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000019450	ZIC3-202	2642	XM_010640530	ENSFDAP00000006085	246 (aa)	XP_010638832	-
ENSFDAT00000019445	ZIC3-201	1122	-	ENSFDAP00000006081	373 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000014929's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000014929's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000014929	ZIC3	60	47.788	ENSFDAG00000008687	-	90	48.913
ENSFDAG00000014929	ZIC3	67	43.119	ENSFDAG00000008114	ZNF81	59	43.119
ENSFDAG00000014929	ZIC3	77	30.968	ENSFDAG00000019359	-	77	30.968
ENSFDAG00000014929	ZIC3	59	43.636	ENSFDAG00000020138	-	66	43.636
ENSFDAG00000014929	ZIC3	61	40.860	ENSFDAG00000015190	-	70	40.860
ENSFDAG00000014929	ZIC3	98	79.435	ENSFDAG00000013872	ZIC1	100	75.180
ENSFDAG00000014929	ZIC3	67	40.708	ENSFDAG00000009594	-	73	40.708
ENSFDAG00000014929	ZIC3	67	43.636	ENSFDAG00000010369	-	82	43.636
ENSFDAG00000014929	ZIC3	58	43.396	ENSFDAG00000008549	ZNF2	50	38.739
ENSFDAG00000014929	ZIC3	63	34.615	ENSFDAG00000010904	ZBTB41	50	35.714
ENSFDAG00000014929	ZIC3	74	46.018	ENSFDAG00000015590	ZNF235	62	46.018
ENSFDAG00000014929	ZIC3	70	34.667	ENSFDAG00000016841	GTF3A	82	37.838
ENSFDAG00000014929	ZIC3	65	39.048	ENSFDAG00000019296	-	93	39.048
ENSFDAG00000014929	ZIC3	68	43.820	ENSFDAG00000020159	ZNF319	65	45.349
ENSFDAG00000014929	ZIC3	59	41.111	ENSFDAG00000006075	-	100	42.222
ENSFDAG00000014929	ZIC3	60	42.727	ENSFDAG00000005609	-	66	42.727
ENSFDAG00000014929	ZIC3	64	39.815	ENSFDAG00000021361	PRDM5	75	40.367
ENSFDAG00000014929	ZIC3	79	41.346	ENSFDAG00000007103	ZNF236	50	41.346
ENSFDAG00000014929	ZIC3	65	42.857	ENSFDAG00000010005	ZFP64	60	42.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000014929	ZIC3	100	99.593	ENSG00000156925	ZIC3	79	98.113	Homo_sapiens
ENSFDAG00000014929	ZIC3	100	99.593	ENSANAG00000019614	ZIC3	79	98.652	Aotus_nancymaae
ENSFDAG00000014929	ZIC3	100	99.593	ENSCJAG00000013792	ZIC3	79	98.383	Callithrix_jacchus
ENSFDAG00000014929	ZIC3	100	99.593	ENSCAFG00000018979	ZIC3	80	98.922	Canis_familiaris
ENSFDAG00000014929	ZIC3	100	99.593	ENSTSYG00000003356	ZIC3	79	99.191	Carlito_syrichta
ENSFDAG00000014929	ZIC3	100	98.374	ENSCPOG00000002374	ZIC3	100	98.374	Cavia_porcellus
ENSFDAG00000014929	ZIC3	100	99.593	ENSCCAG00000025983	ZIC3	79	98.383	Cebus_capucinus
ENSFDAG00000014929	ZIC3	100	99.593	ENSCATG00000036569	ZIC3	80	98.652	Cercocebus_atys
ENSFDAG00000014929	ZIC3	100	99.593	ENSCLAG00000001934	ZIC3	80	99.191	Chinchilla_lanigera
ENSFDAG00000014929	ZIC3	97	93.361	ENSCPBG00000026115	ZIC3	87	87.433	Chrysemys_picta_bellii
ENSFDAG00000014929	ZIC3	100	99.593	ENSCANG00000017505	ZIC3	80	98.922	Colobus_angolensis_palliatus
ENSFDAG00000014929	ZIC3	100	99.187	ENSCGRG00001024527	Zic3	80	98.922	Cricetulus_griseus_chok1gshd
ENSFDAG00000014929	ZIC3	100	99.187	ENSDORG00000025481	Zic3	80	98.383	Dipodomys_ordii
ENSFDAG00000014929	ZIC3	100	99.593	ENSFCAG00000025684	ZIC3	80	98.922	Felis_catus
ENSFDAG00000014929	ZIC3	94	79.603	ENSGAGG00000004149	ZIC3	74	79.661	Gopherus_agassizii
ENSFDAG00000014929	ZIC3	100	99.593	ENSGGOG00000011914	ZIC3	80	98.383	Gorilla_gorilla
ENSFDAG00000014929	ZIC3	100	100.000	ENSHGLG00000006298	ZIC3	80	99.191	Heterocephalus_glaber_female
ENSFDAG00000014929	ZIC3	100	61.382	ENSHGLG00100002829	ZIC3	100	78.344	Heterocephalus_glaber_male
ENSFDAG00000014929	ZIC3	100	99.593	ENSJJAG00000022714	Zic3	80	99.191	Jaculus_jaculus
ENSFDAG00000014929	ZIC3	100	91.093	ENSLACG00000014597	ZIC3	83	80.914	Latimeria_chalumnae
ENSFDAG00000014929	ZIC3	100	98.780	ENSLAFG00000007048	ZIC3	96	96.757	Loxodonta_africana
ENSFDAG00000014929	ZIC3	100	99.593	ENSMFAG00000027018	ZIC3	80	98.652	Macaca_fascicularis
ENSFDAG00000014929	ZIC3	84	98.718	ENSMMUG00000002023	ZIC3	68	98.718	Macaca_mulatta
ENSFDAG00000014929	ZIC3	100	99.593	ENSMNEG00000040682	ZIC3	80	98.652	Macaca_nemestrina
ENSFDAG00000014929	ZIC3	100	99.593	ENSMLEG00000004378	ZIC3	80	98.652	Mandrillus_leucophaeus
ENSFDAG00000014929	ZIC3	100	99.187	ENSMAUG00000009402	Zic3	80	98.922	Mesocricetus_auratus
ENSFDAG00000014929	ZIC3	100	99.593	ENSMICG00000042529	ZIC3	79	98.652	Microcebus_murinus
ENSFDAG00000014929	ZIC3	100	99.187	ENSMOCG00000020544	Zic3	80	98.652	Microtus_ochrogaster
ENSFDAG00000014929	ZIC3	100	99.187	MGP_CAROLIEiJ_G0033101	Zic3	100	99.187	Mus_caroli
ENSFDAG00000014929	ZIC3	100	99.187	ENSMUSG00000067860	Zic3	100	99.187	Mus_musculus
ENSFDAG00000014929	ZIC3	100	99.187	MGP_PahariEiJ_G0031644	Zic3	100	99.187	Mus_pahari
ENSFDAG00000014929	ZIC3	100	99.187	MGP_SPRETEiJ_G0034256	Zic3	100	99.187	Mus_spretus
ENSFDAG00000014929	ZIC3	100	98.780	ENSNGAG00000023346	Zic3	80	98.652	Nannospalax_galili
ENSFDAG00000014929	ZIC3	100	99.187	ENSNLEG00000003005	-	78	97.865	Nomascus_leucogenys
ENSFDAG00000014929	ZIC3	100	99.593	ENSODEG00000005556	ZIC3	80	98.922	Octodon_degus
ENSFDAG00000014929	ZIC3	100	99.593	ENSPPAG00000030013	ZIC3	80	98.383	Pan_paniscus
ENSFDAG00000014929	ZIC3	100	99.187	ENSPPRG00000010839	ZIC3	79	98.652	Panthera_pardus
ENSFDAG00000014929	ZIC3	100	99.593	ENSPTRG00000043849	ZIC3	80	98.383	Pan_troglodytes
ENSFDAG00000014929	ZIC3	100	99.593	ENSPANG00000011357	ZIC3	80	98.652	Papio_anubis
ENSFDAG00000014929	ZIC3	100	86.640	ENSPKIG00000017705	zic3	82	77.748	Paramormyrops_kingsleyae
ENSFDAG00000014929	ZIC3	100	93.574	ENSPSIG00000011896	ZIC3	99	90.753	Pelodiscus_sinensis
ENSFDAG00000014929	ZIC3	100	99.187	ENSPEMG00000022168	Zic3	80	98.922	Peromyscus_maniculatus_bairdii
ENSFDAG00000014929	ZIC3	100	99.187	ENSPCOG00000021557	ZIC3	80	98.383	Propithecus_coquereli
ENSFDAG00000014929	ZIC3	100	99.187	ENSRNOG00000000861	Zic3	80	98.652	Rattus_norvegicus
ENSFDAG00000014929	ZIC3	100	99.593	ENSRBIG00000030660	ZIC3	80	98.922	Rhinopithecus_bieti
ENSFDAG00000014929	ZIC3	100	99.593	ENSRROG00000028410	ZIC3	80	98.922	Rhinopithecus_roxellana
ENSFDAG00000014929	ZIC3	100	99.593	ENSSBOG00000024684	ZIC3	79	98.922	Saimiri_boliviensis_boliviensis
ENSFDAG00000014929	ZIC3	100	86.235	ENSSFOG00015008079	zic3	86	80.580	Scleropages_formosus
ENSFDAG00000014929	ZIC3	100	85.830	ENSSFOG00015011731	zic3	82	78.016	Scleropages_formosus
ENSFDAG00000014929	ZIC3	95	90.598	ENSTGUG00000002155	ZIC3	96	83.777	Taeniopygia_guttata
ENSFDAG00000014929	ZIC3	100	99.593	ENSVVUG00000021378	ZIC3	80	98.922	Vulpes_vulpes
ENSFDAG00000014929	ZIC3	99	86.640	ENSXETG00000024458	zic3	82	79.412	Xenopus_tropicalis