EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000015113 (Gene tree)
Gene ID: 104869462
Gene Symbol: RAVER1
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 12368 bases
Position: chrKN122676.1:1022376-1034743
Accession: 104869462
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000006324	RRM_1	PF00076.22	2.1e-28	1	3
ENSFDAP00000006324	RRM_1	PF00076.22	2.1e-28	2	3
ENSFDAP00000006324	RRM_1	PF00076.22	2.1e-28	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000019655	RAVER1-201	2900	XM_010634704	ENSFDAP00000006324	740 (aa)	XP_010633006	-

Gene Model

Click here to download ENSFDAG00000015113's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000015113's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000015113	RAVER1	64	50.000	ENSFDAG00000010721	RAVER2	84	47.817

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000015113	RAVER1	100	89.637	ENSG00000161847	RAVER1	100	89.906	Homo_sapiens
ENSFDAG00000015113	RAVER1	100	89.488	ENSAMEG00000011738	RAVER1	98	89.218	Ailuropoda_melanoleuca
ENSFDAG00000015113	RAVER1	74	75.439	ENSAPEG00000010854	raver1	80	78.846	Amphiprion_percula
ENSFDAG00000015113	RAVER1	98	51.210	ENSATEG00000021004	raver1	91	50.884	Anabas_testudineus
ENSFDAG00000015113	RAVER1	84	59.190	ENSACAG00000008386	-	91	57.057	Anolis_carolinensis
ENSFDAG00000015113	RAVER1	100	88.829	ENSANAG00000028226	RAVER1	98	89.637	Aotus_nancymaae
ENSFDAG00000015113	RAVER1	97	50.068	ENSACLG00000018492	raver1	90	50.275	Astatotilapia_calliptera
ENSFDAG00000015113	RAVER1	77	78.333	ENSAMXG00000005132	raver1	78	84.906	Astyanax_mexicanus
ENSFDAG00000015113	RAVER1	100	88.410	ENSBTAG00000015721	RAVER1	97	93.500	Bos_taurus
ENSFDAG00000015113	RAVER1	100	88.829	ENSCJAG00000005671	RAVER1	98	89.637	Callithrix_jacchus
ENSFDAG00000015113	RAVER1	100	88.275	ENSCAFG00000017861	RAVER1	98	88.275	Canis_familiaris
ENSFDAG00000015113	RAVER1	100	88.275	ENSCAFG00020024449	RAVER1	100	88.275	Canis_lupus_dingo
ENSFDAG00000015113	RAVER1	100	86.792	ENSCHIG00000006718	RAVER1	100	87.466	Capra_hircus
ENSFDAG00000015113	RAVER1	91	83.923	ENSTSYG00000027107	RAVER1	100	83.481	Carlito_syrichta
ENSFDAG00000015113	RAVER1	99	80.217	ENSCAPG00000002269	RAVER1	100	88.939	Cavia_aperea
ENSFDAG00000015113	RAVER1	100	91.779	ENSCPOG00000001008	RAVER1	100	91.914	Cavia_porcellus
ENSFDAG00000015113	RAVER1	100	88.560	ENSCCAG00000031723	RAVER1	98	89.367	Cebus_capucinus
ENSFDAG00000015113	RAVER1	100	89.367	ENSCATG00000043863	RAVER1	98	90.040	Cercocebus_atys
ENSFDAG00000015113	RAVER1	100	93.127	ENSCLAG00000009336	RAVER1	100	92.992	Chinchilla_lanigera
ENSFDAG00000015113	RAVER1	100	89.502	ENSCSAG00000007317	RAVER1	84	90.175	Chlorocebus_sabaeus
ENSFDAG00000015113	RAVER1	96	62.082	ENSCPBG00000005349	-	96	61.578	Chrysemys_picta_bellii
ENSFDAG00000015113	RAVER1	100	89.502	ENSCANG00000008337	RAVER1	98	90.175	Colobus_angolensis_palliatus
ENSFDAG00000015113	RAVER1	100	90.040	ENSCGRG00001013260	-	100	90.040	Cricetulus_griseus_chok1gshd
ENSFDAG00000015113	RAVER1	100	90.040	ENSCGRG00000015138	-	100	90.040	Cricetulus_griseus_crigri
ENSFDAG00000015113	RAVER1	75	78.846	ENSCSEG00000021092	raver1	75	78.846	Cynoglossus_semilaevis
ENSFDAG00000015113	RAVER1	97	49.731	ENSCVAG00000013971	raver1	91	48.207	Cyprinodon_variegatus
ENSFDAG00000015113	RAVER1	78	58.847	ENSDARG00000052617	raver1	91	49.313	Danio_rerio
ENSFDAG00000015113	RAVER1	100	82.213	ENSDORG00000010106	-	100	81.950	Dipodomys_ordii
ENSFDAG00000015113	RAVER1	66	80.519	ENSETEG00000008201	-	74	88.710	Echinops_telfairi
ENSFDAG00000015113	RAVER1	65	93.781	ENSEASG00005010544	-	88	93.781	Equus_asinus_asinus
ENSFDAG00000015113	RAVER1	100	89.757	ENSECAG00000024966	RAVER1	98	91.375	Equus_caballus
ENSFDAG00000015113	RAVER1	97	51.436	ENSELUG00000023287	raver1	91	52.493	Esox_lucius
ENSFDAG00000015113	RAVER1	100	90.970	ENSFCAG00000009435	RAVER1	98	90.701	Felis_catus
ENSFDAG00000015113	RAVER1	80	59.216	ENSGMOG00000003649	raver1	74	84.000	Gadus_morhua
ENSFDAG00000015113	RAVER1	66	44.800	ENSGALG00000050608	-	51	44.130	Gallus_gallus
ENSFDAG00000015113	RAVER1	96	61.867	ENSGAGG00000011748	-	93	78.198	Gopherus_agassizii
ENSFDAG00000015113	RAVER1	100	89.367	ENSGGOG00000006015	RAVER1	98	89.637	Gorilla_gorilla
ENSFDAG00000015113	RAVER1	97	48.840	ENSHBUG00000021210	raver1	90	50.275	Haplochromis_burtoni
ENSFDAG00000015113	RAVER1	100	94.872	ENSHGLG00000015460	RAVER1	100	94.872	Heterocephalus_glaber_female
ENSFDAG00000015113	RAVER1	100	94.872	ENSHGLG00100000812	RAVER1	100	94.872	Heterocephalus_glaber_male
ENSFDAG00000015113	RAVER1	96	49.862	ENSHCOG00000000449	raver1	88	49.096	Hippocampus_comes
ENSFDAG00000015113	RAVER1	97	51.918	ENSIPUG00000013153	raver1	74	87.755	Ictalurus_punctatus
ENSFDAG00000015113	RAVER1	100	90.323	ENSSTOG00000003241	RAVER1	100	89.919	Ictidomys_tridecemlineatus
ENSFDAG00000015113	RAVER1	100	89.651	ENSJJAG00000018219	-	100	89.113	Jaculus_jaculus
ENSFDAG00000015113	RAVER1	98	50.000	ENSKMAG00000017355	raver1	91	49.727	Kryptolebias_marmoratus
ENSFDAG00000015113	RAVER1	68	59.412	ENSLBEG00000008268	raver1	68	58.882	Labrus_bergylta
ENSFDAG00000015113	RAVER1	90	59.914	ENSLACG00000005809	-	99	60.920	Latimeria_chalumnae
ENSFDAG00000015113	RAVER1	96	55.228	ENSLOCG00000007500	raver1	92	54.717	Lepisosteus_oculatus
ENSFDAG00000015113	RAVER1	100	90.566	ENSLAFG00000003664	-	100	89.744	Loxodonta_africana
ENSFDAG00000015113	RAVER1	100	89.233	ENSMFAG00000037977	RAVER1	98	89.906	Macaca_fascicularis
ENSFDAG00000015113	RAVER1	100	89.233	ENSMMUG00000014897	RAVER1	98	89.906	Macaca_mulatta
ENSFDAG00000015113	RAVER1	100	89.233	ENSMNEG00000028390	RAVER1	98	89.906	Macaca_nemestrina
ENSFDAG00000015113	RAVER1	100	89.367	ENSMLEG00000041959	RAVER1	98	90.040	Mandrillus_leucophaeus
ENSFDAG00000015113	RAVER1	75	77.358	ENSMAMG00000012059	raver1	72	84.000	Mastacembelus_armatus
ENSFDAG00000015113	RAVER1	97	50.204	ENSMZEG00005019002	raver1	91	51.153	Maylandia_zebra
ENSFDAG00000015113	RAVER1	100	89.664	ENSMAUG00000017948	-	100	89.128	Mesocricetus_auratus
ENSFDAG00000015113	RAVER1	99	88.799	ENSMICG00000010326	RAVER1	99	88.259	Microcebus_murinus
ENSFDAG00000015113	RAVER1	100	90.040	ENSMOCG00000015553	-	100	90.040	Microtus_ochrogaster
ENSFDAG00000015113	RAVER1	99	50.133	ENSMMOG00000012093	raver1	91	51.108	Mola_mola
ENSFDAG00000015113	RAVER1	97	75.069	ENSMODG00000005584	-	89	73.829	Monodelphis_domestica
ENSFDAG00000015113	RAVER1	100	87.850	MGP_CAROLIEiJ_G0031860	-	100	87.183	Mus_caroli
ENSFDAG00000015113	RAVER1	100	87.984	ENSMUSG00000010205	Raver1	100	88.117	Mus_musculus
ENSFDAG00000015113	RAVER1	100	87.118	MGP_PahariEiJ_G0014726	-	100	87.251	Mus_pahari
ENSFDAG00000015113	RAVER1	100	87.850	MGP_SPRETEiJ_G0032984	-	100	87.984	Mus_spretus
ENSFDAG00000015113	RAVER1	100	90.970	ENSMPUG00000006712	RAVER1	98	90.701	Mustela_putorius_furo
ENSFDAG00000015113	RAVER1	100	88.005	ENSMLUG00000012328	RAVER1	100	88.005	Myotis_lucifugus
ENSFDAG00000015113	RAVER1	100	89.367	ENSNGAG00000001260	-	100	89.367	Nannospalax_galili
ENSFDAG00000015113	RAVER1	97	45.306	ENSNBRG00000010139	raver1	90	45.368	Neolamprologus_brichardi
ENSFDAG00000015113	RAVER1	100	89.233	ENSNLEG00000012181	RAVER1	98	89.906	Nomascus_leucogenys
ENSFDAG00000015113	RAVER1	90	73.669	ENSMEUG00000003281	-	100	73.225	Notamacropus_eugenii
ENSFDAG00000015113	RAVER1	51	90.625	ENSOPRG00000005855	-	51	86.719	Ochotona_princeps
ENSFDAG00000015113	RAVER1	100	93.396	ENSODEG00000016260	RAVER1	100	93.261	Octodon_degus
ENSFDAG00000015113	RAVER1	96	50.897	ENSONIG00000001559	raver1	99	50.754	Oreochromis_niloticus
ENSFDAG00000015113	RAVER1	100	83.558	ENSOCUG00000020918	RAVER1	98	83.962	Oryctolagus_cuniculus
ENSFDAG00000015113	RAVER1	96	50.069	ENSORLG00000005458	raver1	60	83.673	Oryzias_latipes
ENSFDAG00000015113	RAVER1	96	49.794	ENSORLG00020004392	raver1	66	67.263	Oryzias_latipes_hni
ENSFDAG00000015113	RAVER1	72	81.633	ENSOMEG00000023956	raver1	78	81.633	Oryzias_melastigma
ENSFDAG00000015113	RAVER1	100	89.218	ENSOGAG00000011071	RAVER1	98	88.949	Otolemur_garnettii
ENSFDAG00000015113	RAVER1	100	84.267	ENSOARG00000015886	RAVER1	98	85.984	Ovis_aries
ENSFDAG00000015113	RAVER1	100	89.637	ENSPPAG00000002611	RAVER1	98	89.906	Pan_paniscus
ENSFDAG00000015113	RAVER1	100	91.375	ENSPPRG00000009912	RAVER1	98	91.105	Panthera_pardus
ENSFDAG00000015113	RAVER1	100	89.637	ENSPTRG00000010466	RAVER1	98	89.906	Pan_troglodytes
ENSFDAG00000015113	RAVER1	100	89.233	ENSPANG00000004122	RAVER1	98	89.906	Papio_anubis
ENSFDAG00000015113	RAVER1	100	90.188	ENSPEMG00000016411	-	100	90.457	Peromyscus_maniculatus_bairdii
ENSFDAG00000015113	RAVER1	100	76.368	ENSPCIG00000018695	-	99	80.795	Phascolarctos_cinereus
ENSFDAG00000015113	RAVER1	55	80.000	ENSPLAG00000020793	raver1	54	80.000	Poecilia_latipinna
ENSFDAG00000015113	RAVER1	96	52.049	ENSPMEG00000011220	raver1	90	49.660	Poecilia_mexicana
ENSFDAG00000015113	RAVER1	72	88.372	ENSPREG00000006864	raver1	75	88.372	Poecilia_reticulata
ENSFDAG00000015113	RAVER1	100	88.394	ENSPPYG00000010514	RAVER1	84	89.488	Pongo_abelii
ENSFDAG00000015113	RAVER1	100	90.310	ENSPCOG00000026605	RAVER1	98	90.579	Propithecus_coquereli
ENSFDAG00000015113	RAVER1	100	89.488	ENSPVAG00000003689	RAVER1	100	89.757	Pteropus_vampyrus
ENSFDAG00000015113	RAVER1	69	82.353	ENSPNYG00000013284	raver1	63	82.353	Pundamilia_nyererei
ENSFDAG00000015113	RAVER1	96	50.829	ENSPNAG00000015476	raver1	91	49.597	Pygocentrus_nattereri
ENSFDAG00000015113	RAVER1	100	88.385	ENSRNOG00000020710	Raver1	100	88.385	Rattus_norvegicus
ENSFDAG00000015113	RAVER1	100	89.367	ENSRBIG00000034702	RAVER1	98	89.906	Rhinopithecus_bieti
ENSFDAG00000015113	RAVER1	100	87.618	ENSRROG00000031186	RAVER1	98	87.752	Rhinopithecus_roxellana
ENSFDAG00000015113	RAVER1	100	87.079	ENSSBOG00000023423	RAVER1	98	87.483	Saimiri_boliviensis_boliviensis
ENSFDAG00000015113	RAVER1	90	74.521	ENSSHAG00000008181	-	90	74.374	Sarcophilus_harrisii
ENSFDAG00000015113	RAVER1	74	83.673	ENSSMAG00000004546	raver1	72	83.673	Scophthalmus_maximus
ENSFDAG00000015113	RAVER1	98	51.467	ENSSDUG00000021063	raver1	78	82.000	Seriola_dumerili
ENSFDAG00000015113	RAVER1	79	59.883	ENSSLDG00000014505	raver1	91	51.486	Seriola_lalandi_dorsalis
ENSFDAG00000015113	RAVER1	100	91.105	ENSSSCG00000013650	-	98	90.701	Sus_scrofa
ENSFDAG00000015113	RAVER1	96	49.521	ENSTRUG00000025641	raver1	91	49.036	Takifugu_rubripes
ENSFDAG00000015113	RAVER1	100	89.757	ENSTTRG00000009552	RAVER1	100	90.027	Tursiops_truncatus
ENSFDAG00000015113	RAVER1	100	91.644	ENSUAMG00000020385	RAVER1	98	91.375	Ursus_americanus
ENSFDAG00000015113	RAVER1	100	88.544	ENSVVUG00000028976	RAVER1	98	88.544	Vulpes_vulpes
ENSFDAG00000015113	RAVER1	100	55.000	ENSXETG00000011622	raver1	94	56.346	Xenopus_tropicalis
ENSFDAG00000015113	RAVER1	99	50.399	ENSXCOG00000016368	raver1	90	49.589	Xiphophorus_couchianus