EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000015328 (Gene tree)
Gene ID: 104853532
Gene Symbol: LRPPRC
Alias: -
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 108423 bases
Position: chrKN124820.1:264643-373065
Accession: 104853532
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000006602	PPR	PF01535.20	2.1e-29	1	6
ENSFDAP00000006602	PPR	PF01535.20	2.1e-29	2	6
ENSFDAP00000006602	PPR	PF01535.20	2.1e-29	3	6
ENSFDAP00000006602	PPR	PF01535.20	2.1e-29	4	6
ENSFDAP00000006602	PPR	PF01535.20	2.1e-29	5	6
ENSFDAP00000006602	PPR	PF01535.20	2.1e-29	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000029413	LRPPRC-201	4200	XM_010611499	ENSFDAP00000006602	1399 (aa)	XP_010609801	UPI00053F3854

Gene Model

Click here to download ENSFDAG00000015328's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000015328's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000015328	LRPPRC	99	49.302	ENSAPOG00000016610	lrpprc	99	49.302	Acanthochromis_polyacanthus
ENSFDAG00000015328	LRPPRC	98	77.518	ENSAMEG00000005852	LRPPRC	100	77.392	Ailuropoda_melanoleuca
ENSFDAG00000015328	LRPPRC	99	47.848	ENSACIG00000009604	lrpprc	99	47.848	Amphilophus_citrinellus
ENSFDAG00000015328	LRPPRC	99	48.713	ENSAOCG00000005886	lrpprc	99	48.713	Amphiprion_ocellaris
ENSFDAG00000015328	LRPPRC	99	46.536	ENSAPEG00000002937	lrpprc	98	46.606	Amphiprion_percula
ENSFDAG00000015328	LRPPRC	92	56.112	ENSATEG00000010555	lrpprc	95	57.602	Anabas_testudineus
ENSFDAG00000015328	LRPPRC	96	60.544	ENSACAG00000029278	LRPPRC	99	59.391	Anolis_carolinensis
ENSFDAG00000015328	LRPPRC	100	75.160	ENSANAG00000027440	LRPPRC	100	75.160	Aotus_nancymaae
ENSFDAG00000015328	LRPPRC	94	50.038	ENSACLG00000023712	lrpprc	92	56.317	Astatotilapia_calliptera
ENSFDAG00000015328	LRPPRC	100	74.804	ENSCJAG00000000794	LRPPRC	100	74.875	Callithrix_jacchus
ENSFDAG00000015328	LRPPRC	99	78.612	ENSCHIG00000020173	LRPPRC	99	78.612	Capra_hircus
ENSFDAG00000015328	LRPPRC	96	63.216	ENSCAPG00000013631	LRPPRC	100	63.216	Cavia_aperea
ENSFDAG00000015328	LRPPRC	86	81.245	ENSCPOG00000000204	LRPPRC	100	81.245	Cavia_porcellus
ENSFDAG00000015328	LRPPRC	100	75.036	ENSCCAG00000031900	LRPPRC	100	75.036	Cebus_capucinus
ENSFDAG00000015328	LRPPRC	100	76.228	ENSCATG00000014187	LRPPRC	99	74.719	Cercocebus_atys
ENSFDAG00000015328	LRPPRC	99	81.474	ENSCLAG00000005203	LRPPRC	99	81.474	Chinchilla_lanigera
ENSFDAG00000015328	LRPPRC	100	76.228	ENSCSAG00000013233	LRPPRC	100	76.228	Chlorocebus_sabaeus
ENSFDAG00000015328	LRPPRC	84	79.333	ENSCHOG00000003631	LRPPRC	84	79.333	Choloepus_hoffmanni
ENSFDAG00000015328	LRPPRC	100	73.069	ENSCANG00000034961	LRPPRC	100	73.140	Colobus_angolensis_palliatus
ENSFDAG00000015328	LRPPRC	100	74.500	ENSCGRG00001016261	Lrpprc	100	74.571	Cricetulus_griseus_chok1gshd
ENSFDAG00000015328	LRPPRC	100	74.500	ENSCGRG00000004072	Lrpprc	100	74.571	Cricetulus_griseus_crigri
ENSFDAG00000015328	LRPPRC	99	40.014	ENSCSEG00000003850	lrpprc	94	47.600	Cynoglossus_semilaevis
ENSFDAG00000015328	LRPPRC	99	49.119	ENSCVAG00000012967	lrpprc	99	49.119	Cyprinodon_variegatus
ENSFDAG00000015328	LRPPRC	99	47.306	ENSDARG00000043970	lrpprc	98	47.306	Danio_rerio
ENSFDAG00000015328	LRPPRC	82	56.412	ENSDNOG00000032336	-	100	56.412	Dasypus_novemcinctus
ENSFDAG00000015328	LRPPRC	100	76.177	ENSDNOG00000012594	-	100	76.248	Dasypus_novemcinctus
ENSFDAG00000015328	LRPPRC	100	78.929	ENSDORG00000012233	Lrpprc	100	79.000	Dipodomys_ordii
ENSFDAG00000015328	LRPPRC	99	73.624	ENSETEG00000006657	LRPPRC	99	73.624	Echinops_telfairi
ENSFDAG00000015328	LRPPRC	87	68.675	ENSEEUG00000012340	LRPPRC	93	68.675	Erinaceus_europaeus
ENSFDAG00000015328	LRPPRC	97	48.038	ENSELUG00000012803	lrpprc	99	48.038	Esox_lucius
ENSFDAG00000015328	LRPPRC	99	79.571	ENSFCAG00000013468	LRPPRC	99	79.571	Felis_catus
ENSFDAG00000015328	LRPPRC	96	54.748	ENSFALG00000012738	LRPPRC	99	54.748	Ficedula_albicollis
ENSFDAG00000015328	LRPPRC	99	49.196	ENSFHEG00000019604	lrpprc	99	49.196	Fundulus_heteroclitus
ENSFDAG00000015328	LRPPRC	99	46.395	ENSGMOG00000008337	lrpprc	99	46.395	Gadus_morhua
ENSFDAG00000015328	LRPPRC	99	48.500	ENSGAFG00000001455	lrpprc	99	48.500	Gambusia_affinis
ENSFDAG00000015328	LRPPRC	99	48.269	ENSGACG00000010679	lrpprc	99	49.108	Gasterosteus_aculeatus
ENSFDAG00000015328	LRPPRC	99	49.756	ENSHBUG00000000393	lrpprc	97	49.756	Haplochromis_burtoni
ENSFDAG00000015328	LRPPRC	100	85.204	ENSHGLG00000006123	LRPPRC	100	85.204	Heterocephalus_glaber_female
ENSFDAG00000015328	LRPPRC	60	84.274	ENSHGLG00100005960	-	100	84.274	Heterocephalus_glaber_male
ENSFDAG00000015328	LRPPRC	98	47.742	ENSHCOG00000002107	lrpprc	100	47.742	Hippocampus_comes
ENSFDAG00000015328	LRPPRC	93	52.167	ENSIPUG00000009406	lrpprc	92	52.167	Ictalurus_punctatus
ENSFDAG00000015328	LRPPRC	100	78.872	ENSSTOG00000011185	LRPPRC	100	79.015	Ictidomys_tridecemlineatus
ENSFDAG00000015328	LRPPRC	100	76.483	ENSJJAG00000020475	Lrpprc	100	76.483	Jaculus_jaculus
ENSFDAG00000015328	LRPPRC	93	46.742	ENSKMAG00000003287	lrpprc	80	46.742	Kryptolebias_marmoratus
ENSFDAG00000015328	LRPPRC	99	45.119	ENSLBEG00000023225	lrpprc	95	53.557	Labrus_bergylta
ENSFDAG00000015328	LRPPRC	100	57.650	ENSLACG00000014030	LRPPRC	99	57.650	Latimeria_chalumnae
ENSFDAG00000015328	LRPPRC	99	55.439	ENSLOCG00000016390	lrpprc	97	55.439	Lepisosteus_oculatus
ENSFDAG00000015328	LRPPRC	99	71.989	ENSLAFG00000008614	LRPPRC	99	71.989	Loxodonta_africana
ENSFDAG00000015328	LRPPRC	100	76.299	ENSMFAG00000041560	LRPPRC	99	74.906	Macaca_fascicularis
ENSFDAG00000015328	LRPPRC	99	74.733	ENSMMUG00000019841	LRPPRC	100	77.803	Macaca_mulatta
ENSFDAG00000015328	LRPPRC	100	76.228	ENSMNEG00000031613	LRPPRC	100	76.228	Macaca_nemestrina
ENSFDAG00000015328	LRPPRC	98	46.203	ENSMAMG00000021835	lrpprc	98	46.482	Mastacembelus_armatus
ENSFDAG00000015328	LRPPRC	99	49.895	ENSMZEG00005027379	lrpprc	99	49.895	Maylandia_zebra
ENSFDAG00000015328	LRPPRC	100	74.786	ENSMAUG00000012118	Lrpprc	100	74.786	Mesocricetus_auratus
ENSFDAG00000015328	LRPPRC	99	78.301	ENSMICG00000010486	LRPPRC	99	78.464	Microcebus_murinus
ENSFDAG00000015328	LRPPRC	100	76.857	ENSMOCG00000006048	Lrpprc	100	76.857	Microtus_ochrogaster
ENSFDAG00000015328	LRPPRC	95	52.621	ENSMMOG00000007830	lrpprc	98	52.621	Mola_mola
ENSFDAG00000015328	LRPPRC	96	66.322	ENSMODG00000000648	LRPPRC	99	66.322	Monodelphis_domestica
ENSFDAG00000015328	LRPPRC	99	48.109	ENSMALG00000001271	lrpprc	99	48.109	Monopterus_albus
ENSFDAG00000015328	LRPPRC	99	76.391	ENSMPUG00000011800	LRPPRC	99	78.428	Mustela_putorius_furo
ENSFDAG00000015328	LRPPRC	99	77.286	ENSMLUG00000010575	LRPPRC	99	77.286	Myotis_lucifugus
ENSFDAG00000015328	LRPPRC	100	76.786	ENSNGAG00000013069	Lrpprc	100	76.857	Nannospalax_galili
ENSFDAG00000015328	LRPPRC	94	47.843	ENSNBRG00000013202	lrpprc	99	47.843	Neolamprologus_brichardi
ENSFDAG00000015328	LRPPRC	100	74.590	ENSNLEG00000016782	LRPPRC	100	74.590	Nomascus_leucogenys
ENSFDAG00000015328	LRPPRC	93	71.307	ENSOPRG00000016774	LRPPRC	93	71.307	Ochotona_princeps
ENSFDAG00000015328	LRPPRC	100	81.844	ENSODEG00000011211	LRPPRC	100	81.844	Octodon_degus
ENSFDAG00000015328	LRPPRC	99	49.859	ENSONIG00000000917	lrpprc	99	49.859	Oreochromis_niloticus
ENSFDAG00000015328	LRPPRC	74	59.168	ENSOANG00000014670	-	100	59.168	Ornithorhynchus_anatinus
ENSFDAG00000015328	LRPPRC	99	78.286	ENSOCUG00000015046	LRPPRC	96	78.270	Oryctolagus_cuniculus
ENSFDAG00000015328	LRPPRC	99	46.783	ENSORLG00000004605	lrpprc	97	46.512	Oryzias_latipes
ENSFDAG00000015328	LRPPRC	91	50.347	ENSORLG00020012536	lrpprc	99	49.326	Oryzias_latipes_hni
ENSFDAG00000015328	LRPPRC	99	46.396	ENSORLG00015018270	lrpprc	98	52.104	Oryzias_latipes_hsok
ENSFDAG00000015328	LRPPRC	99	75.929	ENSOGAG00000012798	LRPPRC	99	75.929	Otolemur_garnettii
ENSFDAG00000015328	LRPPRC	99	78.643	ENSOARG00000006522	LRPPRC	99	78.643	Ovis_aries
ENSFDAG00000015328	LRPPRC	100	72.811	ENSPPAG00000040876	LRPPRC	100	72.831	Pan_paniscus
ENSFDAG00000015328	LRPPRC	99	79.286	ENSPPRG00000006578	LRPPRC	99	79.286	Panthera_pardus
ENSFDAG00000015328	LRPPRC	97	79.676	ENSPTIG00000000933	LRPPRC	97	79.676	Panthera_tigris_altaica
ENSFDAG00000015328	LRPPRC	100	75.303	ENSPTRG00000011880	LRPPRC	100	75.303	Pan_troglodytes
ENSFDAG00000015328	LRPPRC	100	75.997	ENSPANG00000020731	LRPPRC	99	74.532	Papio_anubis
ENSFDAG00000015328	LRPPRC	89	55.809	ENSPKIG00000022232	lrpprc	96	55.809	Paramormyrops_kingsleyae
ENSFDAG00000015328	LRPPRC	61	63.054	ENSPSIG00000006830	-	98	63.054	Pelodiscus_sinensis
ENSFDAG00000015328	LRPPRC	58	48.276	ENSPMGG00000016597	lrpprc	89	48.276	Periophthalmus_magnuspinnatus
ENSFDAG00000015328	LRPPRC	94	45.061	ENSPMAG00000002147	lrpprc	99	45.061	Petromyzon_marinus
ENSFDAG00000015328	LRPPRC	99	48.317	ENSPFOG00000011227	lrpprc	99	48.758	Poecilia_formosa
ENSFDAG00000015328	LRPPRC	99	48.107	ENSPLAG00000004018	lrpprc	99	48.107	Poecilia_latipinna
ENSFDAG00000015328	LRPPRC	99	48.317	ENSPMEG00000016425	lrpprc	99	48.317	Poecilia_mexicana
ENSFDAG00000015328	LRPPRC	94	50.227	ENSPREG00000003662	lrpprc	93	50.227	Poecilia_reticulata
ENSFDAG00000015328	LRPPRC	57	74.471	ENSPPYG00000029532	-	100	74.471	Pongo_abelii
ENSFDAG00000015328	LRPPRC	84	72.991	ENSPCAG00000001430	LRPPRC	84	72.991	Procavia_capensis
ENSFDAG00000015328	LRPPRC	99	76.286	ENSPVAG00000002007	LRPPRC	99	76.286	Pteropus_vampyrus
ENSFDAG00000015328	LRPPRC	99	48.009	ENSPNYG00000000756	lrpprc	99	48.009	Pundamilia_nyererei
ENSFDAG00000015328	LRPPRC	100	51.566	ENSPNAG00000002895	lrpprc	99	51.566	Pygocentrus_nattereri
ENSFDAG00000015328	LRPPRC	100	75.857	ENSRNOG00000005877	Lrpprc	100	75.929	Rattus_norvegicus
ENSFDAG00000015328	LRPPRC	100	73.938	ENSRBIG00000031552	LRPPRC	100	73.938	Rhinopithecus_bieti
ENSFDAG00000015328	LRPPRC	100	74.822	ENSSBOG00000011807	LRPPRC	100	74.893	Saimiri_boliviensis_boliviensis
ENSFDAG00000015328	LRPPRC	96	63.858	ENSSHAG00000018725	LRPPRC	99	63.858	Sarcophilus_harrisii
ENSFDAG00000015328	LRPPRC	99	48.858	ENSSFOG00015001042	lrpprc	99	48.858	Scleropages_formosus
ENSFDAG00000015328	LRPPRC	99	48.563	ENSSDUG00000019062	lrpprc	99	48.563	Seriola_dumerili
ENSFDAG00000015328	LRPPRC	99	42.705	ENSSLDG00000023028	lrpprc	99	42.867	Seriola_lalandi_dorsalis
ENSFDAG00000015328	LRPPRC	86	67.519	ENSSARG00000000426	LRPPRC	100	67.519	Sorex_araneus
ENSFDAG00000015328	LRPPRC	99	45.555	ENSSPAG00000000162	lrpprc	99	45.868	Stegastes_partitus
ENSFDAG00000015328	LRPPRC	99	77.770	ENSSSCG00000008452	LRPPRC	99	77.770	Sus_scrofa
ENSFDAG00000015328	LRPPRC	94	54.387	ENSTGUG00000003759	LRPPRC	100	54.387	Taeniopygia_guttata
ENSFDAG00000015328	LRPPRC	99	48.925	ENSTRUG00000008409	lrpprc	96	48.925	Takifugu_rubripes
ENSFDAG00000015328	LRPPRC	99	47.542	ENSTNIG00000007470	lrpprc	99	49.295	Tetraodon_nigroviridis
ENSFDAG00000015328	LRPPRC	99	76.054	ENSTTRG00000006403	LRPPRC	99	76.054	Tursiops_truncatus
ENSFDAG00000015328	LRPPRC	96	72.721	ENSVPAG00000008993	LRPPRC	99	72.721	Vicugna_pacos
ENSFDAG00000015328	LRPPRC	99	57.630	ENSXETG00000009296	lrpprc	99	57.559	Xenopus_tropicalis
ENSFDAG00000015328	LRPPRC	99	44.616	ENSXCOG00000013343	lrpprc	95	50.000	Xiphophorus_couchianus
ENSFDAG00000015328	LRPPRC	94	50.716	ENSXMAG00000018108	lrpprc	93	50.716	Xiphophorus_maculatus