EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000015881 (Gene tree)
Gene ID: 104868595
Gene Symbol: SND1
Alias: TDRD11|p100
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 449343 bases
Position: chrKN122609.1:1689678-2139020
Accession: 104868595
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000007339	TUDOR	PF00567.24	5.8e-28	1	1
ENSFDAP00000007339	SNase	PF00565.17	1.5e-69	1	5
ENSFDAP00000007339	SNase	PF00565.17	1.5e-69	2	5
ENSFDAP00000007339	SNase	PF00565.17	1.5e-69	3	5
ENSFDAP00000007339	SNase	PF00565.17	1.5e-69	4	5
ENSFDAP00000007339	SNase	PF00565.17	1.5e-69	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000020569	SND1-201	6998	XM_010633440	ENSFDAP00000007339	910 (aa)	XP_010631742	UPI00053FEF30

Gene Model

Click here to download ENSFDAG00000015881's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000015881's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000015881	SND1	100	98.242	ENSG00000197157	SND1	100	98.242	Homo_sapiens
ENSFDAG00000015881	SND1	100	83.443	ENSAPOG00000017599	snd1	98	84.564	Acanthochromis_polyacanthus
ENSFDAG00000015881	SND1	100	97.917	ENSAMEG00000004664	SND1	94	97.917	Ailuropoda_melanoleuca
ENSFDAG00000015881	SND1	98	81.747	ENSACIG00000003551	snd1	98	81.747	Amphilophus_citrinellus
ENSFDAG00000015881	SND1	100	83.224	ENSAOCG00000014166	snd1	98	84.340	Amphiprion_ocellaris
ENSFDAG00000015881	SND1	100	83.224	ENSAPEG00000007067	snd1	98	84.340	Amphiprion_percula
ENSFDAG00000015881	SND1	98	82.570	ENSATEG00000018475	snd1	88	83.808	Anabas_testudineus
ENSFDAG00000015881	SND1	100	98.462	ENSANAG00000034463	SND1	100	98.462	Aotus_nancymaae
ENSFDAG00000015881	SND1	100	82.895	ENSACLG00000022897	snd1	98	83.929	Astatotilapia_calliptera
ENSFDAG00000015881	SND1	99	84.048	ENSAMXG00000016318	snd1	98	84.521	Astyanax_mexicanus
ENSFDAG00000015881	SND1	100	98.352	ENSBTAG00000010692	SND1	100	98.352	Bos_taurus
ENSFDAG00000015881	SND1	98	46.820	WBGene00006626	tsn-1	98	47.415	Caenorhabditis_elegans
ENSFDAG00000015881	SND1	100	98.242	ENSCJAG00000017668	SND1	100	98.242	Callithrix_jacchus
ENSFDAG00000015881	SND1	100	98.352	ENSCAFG00000001700	SND1	100	98.352	Canis_familiaris
ENSFDAG00000015881	SND1	100	98.352	ENSCAFG00020021639	SND1	100	98.352	Canis_lupus_dingo
ENSFDAG00000015881	SND1	100	98.681	ENSCHIG00000023390	SND1	100	98.681	Capra_hircus
ENSFDAG00000015881	SND1	73	98.944	ENSTSYG00000004979	SND1	96	98.944	Carlito_syrichta
ENSFDAG00000015881	SND1	99	85.111	ENSCAPG00000010677	SND1	98	85.156	Cavia_aperea
ENSFDAG00000015881	SND1	100	98.352	ENSCPOG00000006251	SND1	100	98.352	Cavia_porcellus
ENSFDAG00000015881	SND1	100	98.571	ENSCCAG00000036847	SND1	100	98.571	Cebus_capucinus
ENSFDAG00000015881	SND1	100	98.462	ENSCATG00000035214	SND1	100	98.462	Cercocebus_atys
ENSFDAG00000015881	SND1	100	98.462	ENSCLAG00000011796	SND1	100	98.462	Chinchilla_lanigera
ENSFDAG00000015881	SND1	100	98.462	ENSCSAG00000010182	SND1	100	98.462	Chlorocebus_sabaeus
ENSFDAG00000015881	SND1	78	87.255	ENSCHOG00000002218	SND1	86	87.255	Choloepus_hoffmanni
ENSFDAG00000015881	SND1	100	91.758	ENSCPBG00000018094	SND1	98	92.825	Chrysemys_picta_bellii
ENSFDAG00000015881	SND1	98	56.700	ENSCING00000000524	-	98	56.700	Ciona_intestinalis
ENSFDAG00000015881	SND1	99	57.802	ENSCSAVG00000008807	-	98	57.807	Ciona_savignyi
ENSFDAG00000015881	SND1	100	98.462	ENSCANG00000035119	SND1	100	98.462	Colobus_angolensis_palliatus
ENSFDAG00000015881	SND1	100	97.143	ENSCGRG00001022514	Snd1	100	97.143	Cricetulus_griseus_chok1gshd
ENSFDAG00000015881	SND1	97	97.285	ENSCGRG00000012277	Snd1	99	97.285	Cricetulus_griseus_crigri
ENSFDAG00000015881	SND1	98	83.669	ENSCSEG00000008661	snd1	98	83.669	Cynoglossus_semilaevis
ENSFDAG00000015881	SND1	100	83.772	ENSCVAG00000010316	snd1	100	83.563	Cyprinodon_variegatus
ENSFDAG00000015881	SND1	100	83.790	ENSDARG00000006766	snd1	97	87.545	Danio_rerio
ENSFDAG00000015881	SND1	97	95.603	ENSDNOG00000006795	SND1	100	95.603	Dasypus_novemcinctus
ENSFDAG00000015881	SND1	100	98.681	ENSDORG00000000336	Snd1	100	98.681	Dipodomys_ordii
ENSFDAG00000015881	SND1	98	50.378	FBgn0035121	Tudor-SN	97	50.656	Drosophila_melanogaster
ENSFDAG00000015881	SND1	90	100.000	ENSETEG00000000375	SND1	92	100.000	Echinops_telfairi
ENSFDAG00000015881	SND1	60	67.838	ENSEBUG00000014201	-	84	76.503	Eptatretus_burgeri
ENSFDAG00000015881	SND1	100	96.760	ENSEASG00005008513	SND1	100	96.760	Equus_asinus_asinus
ENSFDAG00000015881	SND1	100	98.352	ENSECAG00000011451	SND1	100	98.352	Equus_caballus
ENSFDAG00000015881	SND1	100	86.813	ENSEEUG00000014737	SND1	100	86.813	Erinaceus_europaeus
ENSFDAG00000015881	SND1	99	81.908	ENSELUG00000001805	snd1	95	82.832	Esox_lucius
ENSFDAG00000015881	SND1	100	98.352	ENSFCAG00000008289	SND1	100	98.352	Felis_catus
ENSFDAG00000015881	SND1	99	81.769	ENSFHEG00000004093	snd1	97	84.284	Fundulus_heteroclitus
ENSFDAG00000015881	SND1	64	73.729	ENSGMOG00000018932	snd1	64	73.729	Gadus_morhua
ENSFDAG00000015881	SND1	100	83.882	ENSGAFG00000008421	snd1	99	84.780	Gambusia_affinis
ENSFDAG00000015881	SND1	100	53.855	ENSGACG00000019793	snd1	98	54.314	Gasterosteus_aculeatus
ENSFDAG00000015881	SND1	100	98.462	ENSGGOG00000009614	SND1	100	98.462	Gorilla_gorilla
ENSFDAG00000015881	SND1	99	83.260	ENSHBUG00000019135	snd1	99	83.929	Haplochromis_burtoni
ENSFDAG00000015881	SND1	100	98.791	ENSHGLG00000003618	SND1	100	98.791	Heterocephalus_glaber_female
ENSFDAG00000015881	SND1	99	98.343	ENSHGLG00100012449	SND1	100	98.343	Heterocephalus_glaber_male
ENSFDAG00000015881	SND1	100	82.566	ENSHCOG00000005266	snd1	98	83.781	Hippocampus_comes
ENSFDAG00000015881	SND1	100	82.604	ENSIPUG00000013279	snd1	98	83.630	Ictalurus_punctatus
ENSFDAG00000015881	SND1	100	98.681	ENSSTOG00000002140	SND1	100	98.681	Ictidomys_tridecemlineatus
ENSFDAG00000015881	SND1	100	98.571	ENSJJAG00000009561	Snd1	100	98.571	Jaculus_jaculus
ENSFDAG00000015881	SND1	100	83.553	ENSKMAG00000016997	snd1	98	84.564	Kryptolebias_marmoratus
ENSFDAG00000015881	SND1	100	84.732	ENSLBEG00000013563	snd1	98	83.445	Labrus_bergylta
ENSFDAG00000015881	SND1	99	85.336	ENSLOCG00000015537	snd1	98	85.588	Lepisosteus_oculatus
ENSFDAG00000015881	SND1	100	97.363	ENSLAFG00000009696	SND1	100	97.363	Loxodonta_africana
ENSFDAG00000015881	SND1	100	98.462	ENSMFAG00000038114	SND1	100	98.462	Macaca_fascicularis
ENSFDAG00000015881	SND1	100	98.462	ENSMMUG00000015432	SND1	100	98.462	Macaca_mulatta
ENSFDAG00000015881	SND1	100	98.462	ENSMNEG00000039808	SND1	100	98.531	Macaca_nemestrina
ENSFDAG00000015881	SND1	100	98.352	ENSMLEG00000029040	SND1	100	98.418	Mandrillus_leucophaeus
ENSFDAG00000015881	SND1	99	83.352	ENSMAMG00000011739	snd1	98	84.040	Mastacembelus_armatus
ENSFDAG00000015881	SND1	100	82.895	ENSMZEG00005005681	snd1	98	83.929	Maylandia_zebra
ENSFDAG00000015881	SND1	100	98.571	ENSMICG00000000097	SND1	100	98.571	Microcebus_murinus
ENSFDAG00000015881	SND1	100	97.802	ENSMOCG00000005040	Snd1	100	97.802	Microtus_ochrogaster
ENSFDAG00000015881	SND1	100	83.004	ENSMMOG00000001795	snd1	98	84.116	Mola_mola
ENSFDAG00000015881	SND1	99	95.318	ENSMODG00000015182	SND1	98	95.307	Monodelphis_domestica
ENSFDAG00000015881	SND1	100	83.004	ENSMALG00000012071	snd1	98	83.817	Monopterus_albus
ENSFDAG00000015881	SND1	100	97.912	MGP_CAROLIEiJ_G0028159	Snd1	100	97.912	Mus_caroli
ENSFDAG00000015881	SND1	100	97.692	ENSMUSG00000001424	Snd1	100	97.692	Mus_musculus
ENSFDAG00000015881	SND1	100	97.912	MGP_PahariEiJ_G0021917	Snd1	100	98.145	Mus_pahari
ENSFDAG00000015881	SND1	100	97.912	MGP_SPRETEiJ_G0029159	Snd1	100	97.912	Mus_spretus
ENSFDAG00000015881	SND1	100	97.912	ENSMPUG00000006545	SND1	100	97.912	Mustela_putorius_furo
ENSFDAG00000015881	SND1	97	96.760	ENSMLUG00000017130	SND1	99	96.760	Myotis_lucifugus
ENSFDAG00000015881	SND1	100	98.022	ENSNGAG00000011186	Snd1	100	98.022	Nannospalax_galili
ENSFDAG00000015881	SND1	100	82.785	ENSNBRG00000006681	snd1	98	83.817	Neolamprologus_brichardi
ENSFDAG00000015881	SND1	100	98.352	ENSNLEG00000012263	SND1	100	98.531	Nomascus_leucogenys
ENSFDAG00000015881	SND1	91	100.000	ENSOPRG00000013405	SND1	91	100.000	Ochotona_princeps
ENSFDAG00000015881	SND1	100	98.791	ENSODEG00000011502	SND1	100	98.791	Octodon_degus
ENSFDAG00000015881	SND1	100	82.785	ENSONIG00000011481	snd1	96	83.817	Oreochromis_niloticus
ENSFDAG00000015881	SND1	98	94.257	ENSOANG00000000817	SND1	98	93.743	Ornithorhynchus_anatinus
ENSFDAG00000015881	SND1	100	97.473	ENSOCUG00000001620	SND1	100	97.473	Oryctolagus_cuniculus
ENSFDAG00000015881	SND1	98	83.799	ENSORLG00000015201	snd1	98	83.799	Oryzias_latipes
ENSFDAG00000015881	SND1	98	83.911	ENSORLG00020013991	snd1	98	83.911	Oryzias_latipes_hni
ENSFDAG00000015881	SND1	98	83.911	ENSORLG00015012436	snd1	98	83.911	Oryzias_latipes_hsok
ENSFDAG00000015881	SND1	100	82.895	ENSOMEG00000006406	snd1	98	84.116	Oryzias_melastigma
ENSFDAG00000015881	SND1	100	97.917	ENSOGAG00000013356	SND1	94	97.917	Otolemur_garnettii
ENSFDAG00000015881	SND1	97	95.932	ENSOARG00000002149	SND1	100	95.932	Ovis_aries
ENSFDAG00000015881	SND1	100	98.352	ENSPPAG00000042947	SND1	100	98.352	Pan_paniscus
ENSFDAG00000015881	SND1	100	98.352	ENSPPRG00000004494	SND1	100	98.352	Panthera_pardus
ENSFDAG00000015881	SND1	100	98.242	ENSPTIG00000014214	SND1	100	98.242	Panthera_tigris_altaica
ENSFDAG00000015881	SND1	100	98.352	ENSPTRG00000023911	SND1	100	98.352	Pan_troglodytes
ENSFDAG00000015881	SND1	97	98.529	ENSPANG00000011997	SND1	99	98.529	Papio_anubis
ENSFDAG00000015881	SND1	99	81.367	ENSPKIG00000023494	snd1	98	81.687	Paramormyrops_kingsleyae
ENSFDAG00000015881	SND1	92	82.754	ENSPMGG00000003629	snd1	100	82.754	Periophthalmus_magnuspinnatus
ENSFDAG00000015881	SND1	100	97.912	ENSPEMG00000010240	Snd1	100	97.912	Peromyscus_maniculatus_bairdii
ENSFDAG00000015881	SND1	97	73.333	ENSPMAG00000007915	-	99	73.333	Petromyzon_marinus
ENSFDAG00000015881	SND1	99	95.764	ENSPCIG00000011561	SND1	98	95.754	Phascolarctos_cinereus
ENSFDAG00000015881	SND1	100	83.333	ENSPFOG00000001557	snd1	98	84.340	Poecilia_formosa
ENSFDAG00000015881	SND1	100	83.333	ENSPLAG00000018459	snd1	95	84.340	Poecilia_latipinna
ENSFDAG00000015881	SND1	100	83.772	ENSPMEG00000006803	snd1	98	84.787	Poecilia_mexicana
ENSFDAG00000015881	SND1	100	83.662	ENSPREG00000002189	snd1	98	84.676	Poecilia_reticulata
ENSFDAG00000015881	SND1	93	98.263	ENSPPYG00000017972	SND1	100	98.263	Pongo_abelii
ENSFDAG00000015881	SND1	100	85.934	ENSPCAG00000011305	SND1	98	85.922	Procavia_capensis
ENSFDAG00000015881	SND1	100	98.242	ENSPCOG00000026791	SND1	100	98.305	Propithecus_coquereli
ENSFDAG00000015881	SND1	100	96.484	ENSPVAG00000013945	SND1	100	96.484	Pteropus_vampyrus
ENSFDAG00000015881	SND1	100	82.895	ENSPNYG00000000932	snd1	98	83.929	Pundamilia_nyererei
ENSFDAG00000015881	SND1	100	83.151	ENSPNAG00000001206	snd1	98	84.187	Pygocentrus_nattereri
ENSFDAG00000015881	SND1	99	97.577	ENSRNOG00000031173	Snd1	99	97.577	Rattus_norvegicus
ENSFDAG00000015881	SND1	73	99.060	ENSRBIG00000027782	-	93	99.430	Rhinopithecus_bieti
ENSFDAG00000015881	SND1	100	98.462	ENSRROG00000033020	SND1	100	98.462	Rhinopithecus_roxellana
ENSFDAG00000015881	SND1	100	98.462	ENSSBOG00000032461	SND1	100	98.462	Saimiri_boliviensis_boliviensis
ENSFDAG00000015881	SND1	98	92.455	ENSSHAG00000015359	SND1	100	92.455	Sarcophilus_harrisii
ENSFDAG00000015881	SND1	100	82.481	ENSSFOG00015001103	snd1	98	83.574	Scleropages_formosus
ENSFDAG00000015881	SND1	98	83.333	ENSSMAG00000001932	snd1	93	83.333	Scophthalmus_maximus
ENSFDAG00000015881	SND1	100	83.224	ENSSDUG00000002699	snd1	92	84.340	Seriola_dumerili
ENSFDAG00000015881	SND1	100	75.987	ENSSLDG00000001950	snd1	98	76.957	Seriola_lalandi_dorsalis
ENSFDAG00000015881	SND1	86	96.226	ENSSARG00000004877	SND1	92	96.226	Sorex_araneus
ENSFDAG00000015881	SND1	73	87.652	ENSSPUG00000017586	SND1	96	87.652	Sphenodon_punctatus
ENSFDAG00000015881	SND1	76	84.433	ENSSPAG00000021398	snd1	96	86.562	Stegastes_partitus
ENSFDAG00000015881	SND1	100	98.242	ENSSSCG00000016590	SND1	100	98.242	Sus_scrofa
ENSFDAG00000015881	SND1	99	83.394	ENSTRUG00000014067	snd1	98	83.445	Takifugu_rubripes
ENSFDAG00000015881	SND1	99	83.700	ENSTNIG00000011019	snd1	98	84.116	Tetraodon_nigroviridis
ENSFDAG00000015881	SND1	93	92.807	ENSTBEG00000003999	SND1	100	92.807	Tupaia_belangeri
ENSFDAG00000015881	SND1	100	93.736	ENSTTRG00000006059	SND1	100	93.736	Tursiops_truncatus
ENSFDAG00000015881	SND1	91	98.099	ENSUAMG00000005604	-	93	98.099	Ursus_americanus
ENSFDAG00000015881	SND1	71	89.351	ENSUAMG00000002820	-	86	89.459	Ursus_americanus
ENSFDAG00000015881	SND1	100	98.132	ENSUMAG00000005960	SND1	100	98.132	Ursus_maritimus
ENSFDAG00000015881	SND1	77	100.000	ENSVPAG00000008302	SND1	74	100.000	Vicugna_pacos
ENSFDAG00000015881	SND1	100	98.132	ENSVVUG00000007226	SND1	100	98.132	Vulpes_vulpes
ENSFDAG00000015881	SND1	97	84.520	ENSXETG00000023043	snd1	100	85.219	Xenopus_tropicalis
ENSFDAG00000015881	SND1	92	81.235	ENSXCOG00000013629	snd1	99	81.235	Xiphophorus_couchianus
ENSFDAG00000015881	SND1	100	83.882	ENSXMAG00000011469	snd1	98	84.899	Xiphophorus_maculatus