EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000016109 (Gene tree)
Gene ID: 104850849
Gene Symbol: -
Alias: GU2|GUB|MGC3199|RH-II/GuB
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 33797 bases
Position: chrKN121161.1:3973539-4007335
Accession: 104850849
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000007662	GUCT	PF08152.12	2.6e-07	1	1
ENSFDAP00000007662	ResIII	PF04851.15	3.5e-10	1	1
ENSFDAP00000007662	DEAD	PF00270.29	2e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000020844	-	2288	XM_010607961	ENSFDAP00000007662	692 (aa)	XP_010606263	A0A091E2K0

Gene Model

Click here to download ENSFDAG00000016109's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000016109's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000016109	-	52	31.383	ENSFDAG00000011500	-	52	32.955
ENSFDAG00000016109	-	51	32.603	ENSFDAG00000017597	DDX41	57	32.603
ENSFDAG00000016109	-	59	33.570	ENSFDAG00000018681	DDX27	52	33.570
ENSFDAG00000016109	-	76	63.589	ENSFDAG00000007401	DDX21	78	60.224
ENSFDAG00000016109	-	53	33.962	ENSFDAG00000009967	DDX17	57	33.962
ENSFDAG00000016109	-	53	32.361	ENSFDAG00000008700	-	88	31.720
ENSFDAG00000016109	-	52	33.067	ENSFDAG00000013328	DDX3Y	58	33.333
ENSFDAG00000016109	-	51	35.196	ENSFDAG00000020660	-	68	35.196
ENSFDAG00000016109	-	53	31.989	ENSFDAG00000006475	EIF4A2	87	31.536
ENSFDAG00000016109	-	56	31.566	ENSFDAG00000014635	-	76	32.514
ENSFDAG00000016109	-	53	33.155	ENSFDAG00000020774	EIF4A3	86	33.155

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000016109	-	91	90.413	ENSG00000107625	DDX50	92	90.413	Homo_sapiens
ENSFDAG00000016109	-	92	88.873	ENSAMEG00000017992	DDX50	92	88.807	Ailuropoda_melanoleuca
ENSFDAG00000016109	-	91	79.116	ENSANAG00000017785	-	91	78.963	Aotus_nancymaae
ENSFDAG00000016109	-	100	89.824	ENSBTAG00000033413	DDX50	92	89.381	Bos_taurus
ENSFDAG00000016109	-	91	90.413	ENSCJAG00000018844	DDX50	92	90.413	Callithrix_jacchus
ENSFDAG00000016109	-	92	89.165	ENSCAFG00000013776	DDX50	99	89.102	Canis_familiaris
ENSFDAG00000016109	-	92	89.165	ENSCAFG00020025977	DDX50	92	89.102	Canis_lupus_dingo
ENSFDAG00000016109	-	100	89.688	ENSCHIG00000000285	DDX50	92	89.233	Capra_hircus
ENSFDAG00000016109	-	91	89.823	ENSTSYG00000004192	DDX50	92	89.823	Carlito_syrichta
ENSFDAG00000016109	-	91	77.623	ENSCAPG00000007230	-	87	80.128	Cavia_aperea
ENSFDAG00000016109	-	91	90.653	ENSCPOG00000002131	-	92	90.708	Cavia_porcellus
ENSFDAG00000016109	-	91	78.515	ENSCCAG00000030543	DDX50	90	78.515	Cebus_capucinus
ENSFDAG00000016109	-	99	65.369	ENSCATG00000039259	-	85	75.415	Cercocebus_atys
ENSFDAG00000016109	-	91	87.740	ENSCATG00000032463	DDX50	92	87.740	Cercocebus_atys
ENSFDAG00000016109	-	97	67.364	ENSCATG00000035153	-	89	79.299	Cercocebus_atys
ENSFDAG00000016109	-	91	90.708	ENSCLAG00000012957	-	92	91.150	Chinchilla_lanigera
ENSFDAG00000016109	-	97	66.049	ENSCLAG00000001938	-	91	66.822	Chinchilla_lanigera
ENSFDAG00000016109	-	91	90.413	ENSCSAG00000007703	DDX50	92	90.413	Chlorocebus_sabaeus
ENSFDAG00000016109	-	87	87.365	ENSCHOG00000000233	DDX50	97	87.365	Choloepus_hoffmanni
ENSFDAG00000016109	-	96	65.847	ENSCANG00000028077	-	91	66.009	Colobus_angolensis_palliatus
ENSFDAG00000016109	-	91	76.637	ENSCANG00000036450	-	92	76.637	Colobus_angolensis_palliatus
ENSFDAG00000016109	-	85	67.143	ENSCANG00000018820	-	88	67.426	Colobus_angolensis_palliatus
ENSFDAG00000016109	-	91	88.496	ENSCGRG00001020223	Ddx50	92	88.496	Cricetulus_griseus_chok1gshd
ENSFDAG00000016109	-	91	88.593	ENSCGRG00000015884	Ddx50	92	88.496	Cricetulus_griseus_crigri
ENSFDAG00000016109	-	87	87.635	ENSDNOG00000001675	DDX50	100	87.481	Dasypus_novemcinctus
ENSFDAG00000016109	-	91	89.823	ENSDORG00000007310	Ddx50	92	89.823	Dipodomys_ordii
ENSFDAG00000016109	-	81	88.263	ENSETEG00000014069	DDX50	83	88.263	Echinops_telfairi
ENSFDAG00000016109	-	92	89.150	ENSEASG00005015595	DDX50	92	89.086	Equus_asinus_asinus
ENSFDAG00000016109	-	92	89.296	ENSECAG00000023044	DDX50	92	89.233	Equus_caballus
ENSFDAG00000016109	-	88	89.655	ENSEEUG00000005782	DDX50	81	90.300	Erinaceus_europaeus
ENSFDAG00000016109	-	91	89.396	ENSFCAG00000012678	DDX50	92	89.396	Felis_catus
ENSFDAG00000016109	-	91	90.413	ENSGGOG00000010100	DDX50	92	90.413	Gorilla_gorilla
ENSFDAG00000016109	-	91	89.971	ENSHGLG00000013466	DDX50	92	89.971	Heterocephalus_glaber_female
ENSFDAG00000016109	-	81	79.087	ENSHGLG00100006568	-	92	79.087	Heterocephalus_glaber_male
ENSFDAG00000016109	-	91	89.971	ENSHGLG00100017191	DDX50	92	89.971	Heterocephalus_glaber_male
ENSFDAG00000016109	-	100	92.000	ENSSTOG00000021852	-	92	91.441	Ictidomys_tridecemlineatus
ENSFDAG00000016109	-	100	88.467	ENSJJAG00000023928	-	92	87.758	Jaculus_jaculus
ENSFDAG00000016109	-	100	67.341	ENSJJAG00000019626	-	91	67.368	Jaculus_jaculus
ENSFDAG00000016109	-	91	90.118	ENSLAFG00000006186	DDX50	92	90.118	Loxodonta_africana
ENSFDAG00000016109	-	91	90.413	ENSMFAG00000044067	DDX50	92	90.413	Macaca_fascicularis
ENSFDAG00000016109	-	97	67.042	ENSMFAG00000045339	-	89	79.479	Macaca_fascicularis
ENSFDAG00000016109	-	91	90.413	ENSMMUG00000001006	DDX50	92	90.413	Macaca_mulatta
ENSFDAG00000016109	-	86	67.363	ENSMMUG00000045343	-	81	69.031	Macaca_mulatta
ENSFDAG00000016109	-	97	67.778	ENSMNEG00000045530	-	89	79.299	Macaca_nemestrina
ENSFDAG00000016109	-	91	88.290	ENSMNEG00000031664	DDX50	92	88.290	Macaca_nemestrina
ENSFDAG00000016109	-	91	89.881	ENSMLEG00000037313	DDX50	92	89.881	Mandrillus_leucophaeus
ENSFDAG00000016109	-	85	77.163	ENSMLEG00000041988	-	89	80.000	Mandrillus_leucophaeus
ENSFDAG00000016109	-	60	93.462	ENSMAUG00000022192	Ddx50	100	93.462	Mesocricetus_auratus
ENSFDAG00000016109	-	91	82.153	ENSMICG00000017539	DDX50	91	82.153	Microcebus_murinus
ENSFDAG00000016109	-	91	88.529	ENSMOCG00000001676	Ddx50	92	88.529	Microtus_ochrogaster
ENSFDAG00000016109	-	91	75.367	ENSMODG00000010741	DDX50	92	75.802	Monodelphis_domestica
ENSFDAG00000016109	-	91	87.463	MGP_CAROLIEiJ_G0015389	Ddx50	92	88.348	Mus_caroli
ENSFDAG00000016109	-	91	87.758	ENSMUSG00000020076	Ddx50	92	88.496	Mus_musculus
ENSFDAG00000016109	-	91	87.758	MGP_PahariEiJ_G0030805	Ddx50	92	88.496	Mus_pahari
ENSFDAG00000016109	-	91	87.758	MGP_SPRETEiJ_G0016200	Ddx50	92	88.496	Mus_spretus
ENSFDAG00000016109	-	87	88.426	ENSMPUG00000004589	DDX50	99	88.735	Mustela_putorius_furo
ENSFDAG00000016109	-	91	89.053	ENSMLUG00000017590	DDX50	92	89.053	Myotis_lucifugus
ENSFDAG00000016109	-	91	89.381	ENSNGAG00000004283	Ddx50	92	89.381	Nannospalax_galili
ENSFDAG00000016109	-	88	65.312	ENSNLEG00000035506	-	88	72.549	Nomascus_leucogenys
ENSFDAG00000016109	-	91	90.265	ENSNLEG00000011631	DDX50	92	90.265	Nomascus_leucogenys
ENSFDAG00000016109	-	91	86.726	ENSOPRG00000001619	DDX50	92	87.463	Ochotona_princeps
ENSFDAG00000016109	-	91	89.823	ENSODEG00000014597	-	92	90.265	Octodon_degus
ENSFDAG00000016109	-	93	63.324	ENSOANG00000004776	DDX50	82	64.024	Ornithorhynchus_anatinus
ENSFDAG00000016109	-	94	87.088	ENSOCUG00000002879	DDX50	95	88.348	Oryctolagus_cuniculus
ENSFDAG00000016109	-	91	89.528	ENSOGAG00000001844	DDX50	92	89.528	Otolemur_garnettii
ENSFDAG00000016109	-	100	89.824	ENSOARG00000005264	DDX50	92	89.381	Ovis_aries
ENSFDAG00000016109	-	91	90.265	ENSPPAG00000040723	DDX50	92	90.265	Pan_paniscus
ENSFDAG00000016109	-	91	89.396	ENSPPRG00000015826	DDX50	92	89.396	Panthera_pardus
ENSFDAG00000016109	-	91	89.396	ENSPTIG00000008454	DDX50	92	89.396	Panthera_tigris_altaica
ENSFDAG00000016109	-	91	90.265	ENSPTRG00000002562	DDX50	92	90.265	Pan_troglodytes
ENSFDAG00000016109	-	91	82.596	ENSPANG00000022143	-	92	82.596	Papio_anubis
ENSFDAG00000016109	-	91	88.348	ENSPEMG00000020899	-	92	88.348	Peromyscus_maniculatus_bairdii
ENSFDAG00000016109	-	91	75.294	ENSPCIG00000016036	DDX50	94	75.403	Phascolarctos_cinereus
ENSFDAG00000016109	-	82	90.375	ENSPPYG00000002390	DDX50	91	90.640	Pongo_abelii
ENSFDAG00000016109	-	83	74.513	ENSPCAG00000009692	DDX50	100	74.513	Procavia_capensis
ENSFDAG00000016109	-	70	83.333	ENSPCOG00000012574	DDX50	81	86.667	Propithecus_coquereli
ENSFDAG00000016109	-	85	92.837	ENSPVAG00000009519	DDX50	78	92.837	Pteropus_vampyrus
ENSFDAG00000016109	-	91	87.168	ENSRNOG00000000396	Ddx50	92	87.906	Rattus_norvegicus
ENSFDAG00000016109	-	99	65.738	ENSRBIG00000036573	-	92	64.795	Rhinopithecus_bieti
ENSFDAG00000016109	-	86	88.336	ENSRBIG00000042841	-	98	90.121	Rhinopithecus_bieti
ENSFDAG00000016109	-	99	64.056	ENSRBIG00000039673	-	90	63.775	Rhinopithecus_bieti
ENSFDAG00000016109	-	91	90.265	ENSRROG00000032158	DDX50	92	90.265	Rhinopithecus_roxellana
ENSFDAG00000016109	-	99	62.989	ENSRROG00000022853	-	91	61.948	Rhinopithecus_roxellana
ENSFDAG00000016109	-	91	81.504	ENSSBOG00000014441	DDX50	94	85.235	Saimiri_boliviensis_boliviensis
ENSFDAG00000016109	-	73	67.568	ENSSHAG00000005334	-	79	64.511	Sarcophilus_harrisii
ENSFDAG00000016109	-	88	75.988	ENSSHAG00000005690	DDX50	91	76.061	Sarcophilus_harrisii
ENSFDAG00000016109	-	100	73.134	ENSSARG00000013553	DDX50	88	79.845	Sorex_araneus
ENSFDAG00000016109	-	100	88.874	ENSSSCG00000010246	DDX50	92	88.201	Sus_scrofa
ENSFDAG00000016109	-	96	68.354	ENSTBEG00000001085	DDX50	92	67.404	Tupaia_belangeri
ENSFDAG00000016109	-	91	82.006	ENSTTRG00000012408	DDX50	92	82.006	Tursiops_truncatus
ENSFDAG00000016109	-	92	89.165	ENSUAMG00000010976	DDX50	92	89.102	Ursus_americanus
ENSFDAG00000016109	-	92	89.165	ENSUMAG00000007726	DDX50	92	89.102	Ursus_maritimus
ENSFDAG00000016109	-	91	88.791	ENSVPAG00000000626	DDX50	92	88.791	Vicugna_pacos
ENSFDAG00000016109	-	83	88.328	ENSVVUG00000020366	DDX50	92	90.664	Vulpes_vulpes