EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000016118 (Gene tree)
Gene ID: 104859556
Gene Symbol: MSI2
Alias: -
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 356377 bases
Position: chrKN121896.1:8587066-8943442
Accession: 104859556
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000007660	RRM_1	PF00076.22	2.4e-34	1	2
ENSFDAP00000007660	RRM_1	PF00076.22	2.4e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000020842	MSI2-201	978	XM_010620225	ENSFDAP00000007660	325 (aa)	XP_010618527	-

Gene Model

Click here to download ENSFDAG00000016118's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000016118's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000016118	MSI2	52	34.706	ENSFDAG00000018739	-	64	35.359
ENSFDAG00000016118	MSI2	54	41.573	ENSFDAG00000010106	-	68	39.819
ENSFDAG00000016118	MSI2	56	43.529	ENSFDAG00000019780	HNRNPA0	75	42.458
ENSFDAG00000016118	MSI2	52	50.888	ENSFDAG00000016490	HNRNPAB	74	49.462
ENSFDAG00000016118	MSI2	54	43.023	ENSFDAG00000021342	-	59	41.758
ENSFDAG00000016118	MSI2	50	43.662	ENSFDAG00000002848	CIRBP	67	43.662
ENSFDAG00000016118	MSI2	52	50.888	ENSFDAG00000000851	-	85	42.739
ENSFDAG00000016118	MSI2	50	43.662	ENSFDAG00000007909	RBM3	82	43.662
ENSFDAG00000016118	MSI2	54	36.709	ENSFDAG00000020873	-	62	36.709
ENSFDAG00000016118	MSI2	52	37.209	ENSFDAG00000014067	-	54	37.912
ENSFDAG00000016118	MSI2	88	33.562	ENSFDAG00000004675	TARDBP	65	33.562
ENSFDAG00000016118	MSI2	52	49.405	ENSFDAG00000007958	HNRNPD	67	41.453
ENSFDAG00000016118	MSI2	54	41.279	ENSFDAG00000000793	HNRNPA2B1	82	40.230
ENSFDAG00000016118	MSI2	100	71.084	ENSFDAG00000019586	MSI1	99	68.807
ENSFDAG00000016118	MSI2	54	44.186	ENSFDAG00000006685	HNRNPA3	85	36.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000016118	MSI2	100	100.000	ENSG00000153944	MSI2	100	100.000	Homo_sapiens
ENSFDAG00000016118	MSI2	100	88.650	ENSAPOG00000001658	msi2a	97	85.358	Acanthochromis_polyacanthus
ENSFDAG00000016118	MSI2	100	100.000	ENSAMEG00000002697	MSI2	99	100.000	Ailuropoda_melanoleuca
ENSFDAG00000016118	MSI2	100	75.749	ENSACIG00000009475	msi2a	97	75.749	Amphilophus_citrinellus
ENSFDAG00000016118	MSI2	100	88.650	ENSAPEG00000007706	msi2a	97	85.358	Amphiprion_percula
ENSFDAG00000016118	MSI2	100	87.500	ENSATEG00000003301	-	100	87.500	Anabas_testudineus
ENSFDAG00000016118	MSI2	100	88.650	ENSATEG00000010498	msi2a	97	85.358	Anabas_testudineus
ENSFDAG00000016118	MSI2	100	71.105	ENSACAG00000005452	MSI2	68	97.826	Anolis_carolinensis
ENSFDAG00000016118	MSI2	100	94.462	ENSANAG00000037827	MSI2	91	99.103	Aotus_nancymaae
ENSFDAG00000016118	MSI2	100	88.344	ENSACLG00000007752	msi2a	97	85.047	Astatotilapia_calliptera
ENSFDAG00000016118	MSI2	100	89.877	ENSAMXG00000032796	msi2a	94	86.462	Astyanax_mexicanus
ENSFDAG00000016118	MSI2	100	90.769	ENSAMXG00000010474	msi2b	95	90.769	Astyanax_mexicanus
ENSFDAG00000016118	MSI2	100	94.154	ENSBTAG00000004406	MSI2	97	94.154	Bos_taurus
ENSFDAG00000016118	MSI2	66	63.158	WBGene00003423	msi-1	71	63.158	Caenorhabditis_elegans
ENSFDAG00000016118	MSI2	100	94.462	ENSCJAG00000013998	MSI2	91	99.103	Callithrix_jacchus
ENSFDAG00000016118	MSI2	100	98.746	ENSCAFG00020025620	MSI2	81	98.746	Canis_lupus_dingo
ENSFDAG00000016118	MSI2	100	94.154	ENSCHIG00000016580	MSI2	94	94.154	Capra_hircus
ENSFDAG00000016118	MSI2	100	89.667	ENSCPOG00000034042	MSI2	99	89.667	Cavia_porcellus
ENSFDAG00000016118	MSI2	100	94.462	ENSCCAG00000033927	MSI2	91	99.103	Cebus_capucinus
ENSFDAG00000016118	MSI2	100	94.462	ENSCATG00000040879	MSI2	91	99.103	Cercocebus_atys
ENSFDAG00000016118	MSI2	100	100.000	ENSCLAG00000014325	MSI2	94	100.000	Chinchilla_lanigera
ENSFDAG00000016118	MSI2	100	94.462	ENSCSAG00000005633	MSI2	94	94.462	Chlorocebus_sabaeus
ENSFDAG00000016118	MSI2	76	100.000	ENSCHOG00000008660	MSI2	83	100.000	Choloepus_hoffmanni
ENSFDAG00000016118	MSI2	100	93.688	ENSCPBG00000009942	MSI2	96	93.688	Chrysemys_picta_bellii
ENSFDAG00000016118	MSI2	64	72.000	ENSCING00000018579	-	97	49.791	Ciona_intestinalis
ENSFDAG00000016118	MSI2	65	66.216	ENSCSAVG00000010397	-	71	65.066	Ciona_savignyi
ENSFDAG00000016118	MSI2	100	100.000	ENSCANG00000036414	MSI2	100	100.000	Colobus_angolensis_palliatus
ENSFDAG00000016118	MSI2	100	94.172	ENSCGRG00001013330	Msi2	94	94.172	Cricetulus_griseus_chok1gshd
ENSFDAG00000016118	MSI2	100	99.693	ENSCGRG00000003141	Msi2	100	99.693	Cricetulus_griseus_crigri
ENSFDAG00000016118	MSI2	55	73.006	ENSCSEG00000013549	msi2a	88	73.006	Cynoglossus_semilaevis
ENSFDAG00000016118	MSI2	84	69.340	ENSCSEG00000013557	msi2a	83	67.925	Cynoglossus_semilaevis
ENSFDAG00000016118	MSI2	100	78.730	ENSCSEG00000003266	-	92	78.730	Cynoglossus_semilaevis
ENSFDAG00000016118	MSI2	100	88.344	ENSCVAG00000017075	msi2a	94	87.879	Cyprinodon_variegatus
ENSFDAG00000016118	MSI2	100	79.564	ENSDARG00000033901	msi2a	95	79.564	Danio_rerio
ENSFDAG00000016118	MSI2	92	89.369	ENSDARG00000032614	msi2b	100	98.020	Danio_rerio
ENSFDAG00000016118	MSI2	100	94.118	ENSDNOG00000014501	MSI2	100	94.118	Dasypus_novemcinctus
ENSFDAG00000016118	MSI2	52	100.000	ENSDORG00000028440	-	100	100.000	Dipodomys_ordii
ENSFDAG00000016118	MSI2	84	81.395	ENSDORG00000005394	Msi2	84	81.395	Dipodomys_ordii
ENSFDAG00000016118	MSI2	100	59.654	FBgn0260943	Rbp6	88	68.750	Drosophila_melanogaster
ENSFDAG00000016118	MSI2	68	76.316	ENSETEG00000012450	-	64	76.316	Echinops_telfairi
ENSFDAG00000016118	MSI2	94	68.810	ENSEBUG00000006732	msi2a	87	68.489	Eptatretus_burgeri
ENSFDAG00000016118	MSI2	100	89.320	ENSEASG00005002965	MSI2	97	89.143	Equus_asinus_asinus
ENSFDAG00000016118	MSI2	100	97.297	ENSECAG00000011435	MSI2	94	97.297	Equus_caballus
ENSFDAG00000016118	MSI2	88	78.967	ENSEEUG00000007810	MSI2	100	78.967	Erinaceus_europaeus
ENSFDAG00000016118	MSI2	100	89.032	ENSELUG00000011747	msi2a	93	89.032	Esox_lucius
ENSFDAG00000016118	MSI2	100	92.332	ENSELUG00000001361	msi2b	93	92.332	Esox_lucius
ENSFDAG00000016118	MSI2	100	94.462	ENSFCAG00000041686	MSI2	91	99.103	Felis_catus
ENSFDAG00000016118	MSI2	100	88.344	ENSFHEG00000000084	msi2a	97	85.047	Fundulus_heteroclitus
ENSFDAG00000016118	MSI2	50	96.386	ENSGMOG00000007596	-	80	96.386	Gadus_morhua
ENSFDAG00000016118	MSI2	100	98.462	ENSGALG00000005567	MSI2	94	98.462	Gallus_gallus
ENSFDAG00000016118	MSI2	96	76.997	ENSGAFG00000006974	msi2a	78	96.154	Gambusia_affinis
ENSFDAG00000016118	MSI2	100	96.053	ENSGAGG00000016542	MSI2	100	96.053	Gopherus_agassizii
ENSFDAG00000016118	MSI2	100	100.000	ENSGGOG00000013182	MSI2	100	100.000	Gorilla_gorilla
ENSFDAG00000016118	MSI2	100	88.344	ENSHBUG00000020800	msi2a	97	85.047	Haplochromis_burtoni
ENSFDAG00000016118	MSI2	100	90.462	ENSHGLG00000012444	MSI2	93	90.462	Heterocephalus_glaber_female
ENSFDAG00000016118	MSI2	52	100.000	ENSHGLG00100004028	-	87	100.000	Heterocephalus_glaber_male
ENSFDAG00000016118	MSI2	81	100.000	ENSHGLG00100003744	MSI2	100	100.000	Heterocephalus_glaber_male
ENSFDAG00000016118	MSI2	74	86.522	ENSHCOG00000017241	-	71	87.678	Hippocampus_comes
ENSFDAG00000016118	MSI2	97	85.804	ENSHCOG00000000266	msi2a	91	85.358	Hippocampus_comes
ENSFDAG00000016118	MSI2	100	86.452	ENSIPUG00000003732	msi2b	93	86.452	Ictalurus_punctatus
ENSFDAG00000016118	MSI2	100	87.742	ENSIPUG00000021097	msi2a	93	86.452	Ictalurus_punctatus
ENSFDAG00000016118	MSI2	100	89.667	ENSSTOG00000007884	MSI2	99	89.667	Ictidomys_tridecemlineatus
ENSFDAG00000016118	MSI2	81	88.889	ENSJJAG00000006292	-	100	88.406	Jaculus_jaculus
ENSFDAG00000016118	MSI2	52	100.000	ENSJJAG00000009467	-	100	100.000	Jaculus_jaculus
ENSFDAG00000016118	MSI2	96	86.859	ENSKMAG00000009494	msi2a	89	87.138	Kryptolebias_marmoratus
ENSFDAG00000016118	MSI2	100	68.915	ENSLBEG00000026223	-	100	68.915	Labrus_bergylta
ENSFDAG00000016118	MSI2	100	85.358	ENSLBEG00000007061	msi2a	97	85.358	Labrus_bergylta
ENSFDAG00000016118	MSI2	51	96.429	ENSLACG00000016798	MSI2	89	96.429	Latimeria_chalumnae
ENSFDAG00000016118	MSI2	100	82.514	ENSLOCG00000004675	msi2b	95	82.514	Lepisosteus_oculatus
ENSFDAG00000016118	MSI2	100	100.000	ENSMFAG00000003775	MSI2	100	100.000	Macaca_fascicularis
ENSFDAG00000016118	MSI2	100	100.000	ENSMMUG00000002069	MSI2	100	100.000	Macaca_mulatta
ENSFDAG00000016118	MSI2	100	94.462	ENSMNEG00000045275	MSI2	91	99.103	Macaca_nemestrina
ENSFDAG00000016118	MSI2	100	100.000	ENSMLEG00000033888	MSI2	100	100.000	Mandrillus_leucophaeus
ENSFDAG00000016118	MSI2	100	85.161	ENSMAMG00000002488	-	85	96.154	Mastacembelus_armatus
ENSFDAG00000016118	MSI2	100	85.498	ENSMAMG00000010503	msi2a	94	86.103	Mastacembelus_armatus
ENSFDAG00000016118	MSI2	100	88.000	ENSMZEG00005007676	msi2a	97	85.047	Maylandia_zebra
ENSFDAG00000016118	MSI2	100	99.693	ENSMAUG00000003862	Msi2	94	99.693	Mesocricetus_auratus
ENSFDAG00000016118	MSI2	100	75.767	ENSMICG00000032913	-	93	74.233	Microcebus_murinus
ENSFDAG00000016118	MSI2	100	94.462	ENSMICG00000013598	-	91	99.103	Microcebus_murinus
ENSFDAG00000016118	MSI2	100	100.000	ENSMOCG00000005820	Msi2	94	100.000	Microtus_ochrogaster
ENSFDAG00000016118	MSI2	96	81.459	ENSMMOG00000008348	msi2a	91	82.622	Mola_mola
ENSFDAG00000016118	MSI2	81	98.551	ENSMODG00000014790	MSI2	100	98.551	Monodelphis_domestica
ENSFDAG00000016118	MSI2	100	88.650	ENSMALG00000000071	msi2a	93	95.455	Monopterus_albus
ENSFDAG00000016118	MSI2	100	100.000	MGP_CAROLIEiJ_G0016948	Msi2	100	100.000	Mus_caroli
ENSFDAG00000016118	MSI2	100	100.000	ENSMUSG00000069769	Msi2	100	100.000	Mus_musculus
ENSFDAG00000016118	MSI2	100	100.000	MGP_PahariEiJ_G0018079	Msi2	100	100.000	Mus_pahari
ENSFDAG00000016118	MSI2	100	100.000	MGP_SPRETEiJ_G0017795	Msi2	100	100.000	Mus_spretus
ENSFDAG00000016118	MSI2	100	94.462	ENSMPUG00000015377	MSI2	97	94.462	Mustela_putorius_furo
ENSFDAG00000016118	MSI2	100	94.154	ENSMLUG00000007865	MSI2	97	94.154	Myotis_lucifugus
ENSFDAG00000016118	MSI2	100	100.000	ENSNGAG00000017807	Msi2	94	100.000	Nannospalax_galili
ENSFDAG00000016118	MSI2	100	85.047	ENSNBRG00000014596	msi2a	97	85.047	Neolamprologus_brichardi
ENSFDAG00000016118	MSI2	100	100.000	ENSNLEG00000008059	MSI2	100	100.000	Nomascus_leucogenys
ENSFDAG00000016118	MSI2	68	88.816	ENSOPRG00000000872	-	64	88.816	Ochotona_princeps
ENSFDAG00000016118	MSI2	100	100.000	ENSODEG00000011974	MSI2	94	100.000	Octodon_degus
ENSFDAG00000016118	MSI2	52	96.154	ENSONIG00000001972	msi2a	72	96.154	Oreochromis_niloticus
ENSFDAG00000016118	MSI2	95	99.103	ENSOANG00000005667	MSI2	74	99.103	Ornithorhynchus_anatinus
ENSFDAG00000016118	MSI2	100	94.462	ENSOCUG00000010440	MSI2	97	94.462	Oryctolagus_cuniculus
ENSFDAG00000016118	MSI2	100	87.742	ENSORLG00000009671	msi2a	94	87.742	Oryzias_latipes
ENSFDAG00000016118	MSI2	100	88.650	ENSORLG00020021556	msi2a	95	88.182	Oryzias_latipes_hni
ENSFDAG00000016118	MSI2	100	87.742	ENSORLG00015004592	msi2a	94	87.742	Oryzias_latipes_hsok
ENSFDAG00000016118	MSI2	100	86.520	ENSOMEG00000000146	msi2a	98	86.520	Oryzias_melastigma
ENSFDAG00000016118	MSI2	100	90.154	ENSOGAG00000005621	MSI2	99	90.154	Otolemur_garnettii
ENSFDAG00000016118	MSI2	100	100.000	ENSPPAG00000037697	MSI2	100	100.000	Pan_paniscus
ENSFDAG00000016118	MSI2	100	94.462	ENSPPRG00000001848	MSI2	91	99.103	Panthera_pardus
ENSFDAG00000016118	MSI2	100	100.000	ENSPTIG00000021678	MSI2	96	100.000	Panthera_tigris_altaica
ENSFDAG00000016118	MSI2	69	82.569	ENSPTIG00000021873	-	84	82.569	Panthera_tigris_altaica
ENSFDAG00000016118	MSI2	100	100.000	ENSPTRG00000009437	MSI2	100	100.000	Pan_troglodytes
ENSFDAG00000016118	MSI2	100	94.462	ENSPANG00000022319	MSI2	91	99.103	Papio_anubis
ENSFDAG00000016118	MSI2	100	81.766	ENSPKIG00000007038	-	94	80.627	Paramormyrops_kingsleyae
ENSFDAG00000016118	MSI2	100	76.042	ENSPSIG00000008618	MSI2	82	97.571	Pelodiscus_sinensis
ENSFDAG00000016118	MSI2	100	84.735	ENSPMGG00000005888	msi2a	97	84.735	Periophthalmus_magnuspinnatus
ENSFDAG00000016118	MSI2	52	100.000	ENSPEMG00000021793	-	100	100.000	Peromyscus_maniculatus_bairdii
ENSFDAG00000016118	MSI2	100	98.408	ENSPCIG00000006063	MSI2	94	96.096	Phascolarctos_cinereus
ENSFDAG00000016118	MSI2	51	94.048	ENSPFOG00000019337	MSI2	74	94.048	Poecilia_formosa
ENSFDAG00000016118	MSI2	52	91.803	ENSPLAG00000000436	msi2a	64	92.562	Poecilia_latipinna
ENSFDAG00000016118	MSI2	99	82.866	ENSPREG00000000881	msi2a	96	82.866	Poecilia_reticulata
ENSFDAG00000016118	MSI2	100	89.844	ENSPPYG00000008244	-	100	89.844	Pongo_abelii
ENSFDAG00000016118	MSI2	79	65.625	ENSPCAG00000010552	MSI2	100	65.625	Procavia_capensis
ENSFDAG00000016118	MSI2	52	100.000	ENSPCOG00000019195	-	93	100.000	Propithecus_coquereli
ENSFDAG00000016118	MSI2	100	85.531	ENSPVAG00000017053	MSI2	100	85.531	Pteropus_vampyrus
ENSFDAG00000016118	MSI2	100	88.000	ENSPNYG00000018393	msi2a	97	85.047	Pundamilia_nyererei
ENSFDAG00000016118	MSI2	100	89.877	ENSPNAG00000014957	msi2a	94	87.385	Pygocentrus_nattereri
ENSFDAG00000016118	MSI2	100	89.711	ENSPNAG00000000844	msi2b	93	87.097	Pygocentrus_nattereri
ENSFDAG00000016118	MSI2	100	93.919	ENSRNOG00000025338	Msi2	100	93.919	Rattus_norvegicus
ENSFDAG00000016118	MSI2	52	100.000	ENSRROG00000034421	-	92	100.000	Rhinopithecus_roxellana
ENSFDAG00000016118	MSI2	100	100.000	ENSSBOG00000026425	MSI2	100	100.000	Saimiri_boliviensis_boliviensis
ENSFDAG00000016118	MSI2	100	98.765	ENSSHAG00000008672	MSI2	100	98.765	Sarcophilus_harrisii
ENSFDAG00000016118	MSI2	100	84.615	ENSSFOG00015021687	-	97	82.154	Scleropages_formosus
ENSFDAG00000016118	MSI2	100	63.859	ENSSFOG00015012168	msi2b	74	87.204	Scleropages_formosus
ENSFDAG00000016118	MSI2	100	88.650	ENSSMAG00000018484	msi2a	97	85.358	Scophthalmus_maximus
ENSFDAG00000016118	MSI2	100	88.650	ENSSDUG00000014507	msi2a	97	85.358	Seriola_dumerili
ENSFDAG00000016118	MSI2	100	85.987	ENSSDUG00000021968	-	86	95.385	Seriola_dumerili
ENSFDAG00000016118	MSI2	100	85.358	ENSSLDG00000017172	msi2a	97	85.358	Seriola_lalandi_dorsalis
ENSFDAG00000016118	MSI2	52	95.620	ENSSPUG00000000913	-	82	95.620	Sphenodon_punctatus
ENSFDAG00000016118	MSI2	100	82.051	ENSSPAG00000017793	msi2a	89	81.410	Stegastes_partitus
ENSFDAG00000016118	MSI2	100	100.000	ENSSSCG00000038505	MSI2	97	100.000	Sus_scrofa
ENSFDAG00000016118	MSI2	81	99.034	ENSTGUG00000008452	MSI2	100	99.034	Taeniopygia_guttata
ENSFDAG00000016118	MSI2	100	87.179	ENSTRUG00000021248	msi2a	88	87.179	Takifugu_rubripes
ENSFDAG00000016118	MSI2	68	83.636	ENSTBEG00000001241	MSI2	67	83.636	Tupaia_belangeri
ENSFDAG00000016118	MSI2	100	84.375	ENSTTRG00000002189	MSI2	100	84.375	Tursiops_truncatus
ENSFDAG00000016118	MSI2	100	94.462	ENSUAMG00000000700	MSI2	97	94.462	Ursus_americanus
ENSFDAG00000016118	MSI2	96	86.219	ENSUMAG00000000505	MSI2	95	86.219	Ursus_maritimus
ENSFDAG00000016118	MSI2	56	84.615	ENSVPAG00000006837	-	62	84.615	Vicugna_pacos
ENSFDAG00000016118	MSI2	100	100.000	ENSVVUG00000011783	MSI2	94	100.000	Vulpes_vulpes
ENSFDAG00000016118	MSI2	100	78.356	ENSXCOG00000006113	msi2a	95	78.356	Xiphophorus_couchianus
ENSFDAG00000016118	MSI2	100	88.344	ENSXMAG00000000608	msi2a	94	87.879	Xiphophorus_maculatus