EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000016311 (Gene tree)
Gene ID: 104869119
Gene Symbol: XRN2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 66473 bases
Position: chrKN122654.1:8897754-8964226
Accession: 104869119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000007894	XRN_N	PF03159.18	9.4e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000021056	XRN2-201	2853	XM_010634206	ENSFDAP00000007894	950 (aa)	XP_010632508	UPI0005401006

Gene Model

Click here to download ENSFDAG00000016311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000016311's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000016311	XRN2	71	38.856	ENSFDAG00000020494	XRN1	61	38.710

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000016311	XRN2	100	97.684	ENSG00000088930	XRN2	100	97.684	Homo_sapiens
ENSFDAG00000016311	XRN2	97	71.809	ENSAPOG00000009818	xrn2	100	70.540	Acanthochromis_polyacanthus
ENSFDAG00000016311	XRN2	100	97.474	ENSAMEG00000012581	XRN2	100	97.474	Ailuropoda_melanoleuca
ENSFDAG00000016311	XRN2	90	70.648	ENSACIG00000015047	xrn2	95	74.664	Amphilophus_citrinellus
ENSFDAG00000016311	XRN2	97	72.222	ENSAOCG00000023632	xrn2	100	70.964	Amphiprion_ocellaris
ENSFDAG00000016311	XRN2	97	72.051	ENSAPEG00000014871	xrn2	100	70.774	Amphiprion_percula
ENSFDAG00000016311	XRN2	95	71.723	ENSATEG00000001273	xrn2	97	71.036	Anabas_testudineus
ENSFDAG00000016311	XRN2	97	83.423	ENSAPLG00000013869	XRN2	99	83.854	Anas_platyrhynchos
ENSFDAG00000016311	XRN2	100	80.642	ENSACAG00000005565	XRN2	100	80.642	Anolis_carolinensis
ENSFDAG00000016311	XRN2	100	97.263	ENSANAG00000020126	XRN2	100	97.263	Aotus_nancymaae
ENSFDAG00000016311	XRN2	90	73.642	ENSACLG00000010522	xrn2	96	76.667	Astatotilapia_calliptera
ENSFDAG00000016311	XRN2	100	71.254	ENSAMXG00000018301	xrn2	100	71.254	Astyanax_mexicanus
ENSFDAG00000016311	XRN2	100	96.004	ENSBTAG00000011304	XRN2	100	96.004	Bos_taurus
ENSFDAG00000016311	XRN2	87	55.944	WBGene00006964	xrn-2	89	55.215	Caenorhabditis_elegans
ENSFDAG00000016311	XRN2	100	97.579	ENSCJAG00000005611	XRN2	100	97.579	Callithrix_jacchus
ENSFDAG00000016311	XRN2	100	97.368	ENSCAFG00000005185	XRN2	100	97.368	Canis_familiaris
ENSFDAG00000016311	XRN2	100	97.368	ENSCAFG00020027479	XRN2	100	97.368	Canis_lupus_dingo
ENSFDAG00000016311	XRN2	100	96.215	ENSCHIG00000006921	XRN2	100	96.215	Capra_hircus
ENSFDAG00000016311	XRN2	100	96.737	ENSTSYG00000008315	XRN2	100	96.737	Carlito_syrichta
ENSFDAG00000016311	XRN2	97	83.064	ENSCAPG00000010773	XRN2	99	82.956	Cavia_aperea
ENSFDAG00000016311	XRN2	100	98.421	ENSCPOG00000009407	XRN2	100	98.421	Cavia_porcellus
ENSFDAG00000016311	XRN2	100	97.789	ENSCATG00000040350	XRN2	100	97.789	Cercocebus_atys
ENSFDAG00000016311	XRN2	100	98.632	ENSCLAG00000013419	XRN2	100	98.632	Chinchilla_lanigera
ENSFDAG00000016311	XRN2	100	97.789	ENSCSAG00000011094	XRN2	100	97.789	Chlorocebus_sabaeus
ENSFDAG00000016311	XRN2	68	97.312	ENSCHOG00000013404	XRN2	70	97.312	Choloepus_hoffmanni
ENSFDAG00000016311	XRN2	100	84.583	ENSCPBG00000023533	XRN2	100	85.208	Chrysemys_picta_bellii
ENSFDAG00000016311	XRN2	86	60.382	ENSCING00000022336	-	100	60.740	Ciona_intestinalis
ENSFDAG00000016311	XRN2	87	58.831	ENSCSAVG00000011217	-	100	61.597	Ciona_savignyi
ENSFDAG00000016311	XRN2	100	97.789	ENSCANG00000040240	XRN2	100	97.789	Colobus_angolensis_palliatus
ENSFDAG00000016311	XRN2	98	96.233	ENSCGRG00001010676	Xrn2	99	96.233	Cricetulus_griseus_chok1gshd
ENSFDAG00000016311	XRN2	97	95.469	ENSCGRG00000006378	Xrn2	99	95.469	Cricetulus_griseus_crigri
ENSFDAG00000016311	XRN2	54	72.549	ENSCSEG00000005628	xrn2	100	72.549	Cynoglossus_semilaevis
ENSFDAG00000016311	XRN2	89	71.609	ENSCVAG00000018999	xrn2	98	77.143	Cyprinodon_variegatus
ENSFDAG00000016311	XRN2	100	70.021	ENSDARG00000101900	xrn2	96	78.203	Danio_rerio
ENSFDAG00000016311	XRN2	100	96.526	ENSDNOG00000001895	XRN2	100	96.526	Dasypus_novemcinctus
ENSFDAG00000016311	XRN2	100	95.263	ENSDORG00000005434	Xrn2	100	95.263	Dipodomys_ordii
ENSFDAG00000016311	XRN2	87	56.711	FBgn0031868	Rat1	87	56.401	Drosophila_melanogaster
ENSFDAG00000016311	XRN2	100	84.105	ENSETEG00000001740	XRN2	100	84.105	Echinops_telfairi
ENSFDAG00000016311	XRN2	84	71.515	ENSEBUG00000016136	xrn2	100	71.515	Eptatretus_burgeri
ENSFDAG00000016311	XRN2	100	97.263	ENSEASG00005002484	XRN2	100	97.263	Equus_asinus_asinus
ENSFDAG00000016311	XRN2	99	97.360	ENSECAG00000018988	XRN2	96	100.000	Equus_caballus
ENSFDAG00000016311	XRN2	80	100.000	ENSEEUG00000009265	XRN2	80	100.000	Erinaceus_europaeus
ENSFDAG00000016311	XRN2	100	70.594	ENSELUG00000000552	xrn2	100	71.004	Esox_lucius
ENSFDAG00000016311	XRN2	100	97.368	ENSFCAG00000007970	XRN2	100	97.368	Felis_catus
ENSFDAG00000016311	XRN2	100	82.704	ENSFALG00000004508	XRN2	100	83.124	Ficedula_albicollis
ENSFDAG00000016311	XRN2	54	69.847	ENSFHEG00000013039	xrn2	98	69.847	Fundulus_heteroclitus
ENSFDAG00000016311	XRN2	86	73.269	ENSGMOG00000013436	xrn2	100	73.269	Gadus_morhua
ENSFDAG00000016311	XRN2	100	82.932	ENSGALG00000008372	XRN2	100	82.932	Gallus_gallus
ENSFDAG00000016311	XRN2	89	73.953	ENSGAFG00000014284	xrn2	98	73.953	Gambusia_affinis
ENSFDAG00000016311	XRN2	87	75.000	ENSGACG00000011870	xrn2	100	75.000	Gasterosteus_aculeatus
ENSFDAG00000016311	XRN2	100	84.375	ENSGAGG00000004884	XRN2	100	85.000	Gopherus_agassizii
ENSFDAG00000016311	XRN2	100	97.895	ENSGGOG00000013738	XRN2	100	97.895	Gorilla_gorilla
ENSFDAG00000016311	XRN2	54	74.472	ENSHBUG00000005077	xrn2	96	76.667	Haplochromis_burtoni
ENSFDAG00000016311	XRN2	100	97.158	ENSHGLG00000014831	XRN2	100	97.158	Heterocephalus_glaber_female
ENSFDAG00000016311	XRN2	100	97.158	ENSHGLG00100013130	XRN2	100	97.158	Heterocephalus_glaber_male
ENSFDAG00000016311	XRN2	99	68.219	ENSHCOG00000011994	xrn2	99	69.130	Hippocampus_comes
ENSFDAG00000016311	XRN2	100	69.929	ENSIPUG00000006639	xrn2	100	69.929	Ictalurus_punctatus
ENSFDAG00000016311	XRN2	100	98.000	ENSSTOG00000000589	XRN2	100	98.000	Ictidomys_tridecemlineatus
ENSFDAG00000016311	XRN2	100	96.632	ENSJJAG00000022128	Xrn2	100	96.632	Jaculus_jaculus
ENSFDAG00000016311	XRN2	54	80.078	ENSLBEG00000010041	xrn2	100	80.078	Labrus_bergylta
ENSFDAG00000016311	XRN2	94	76.863	ENSLACG00000008307	XRN2	99	79.264	Latimeria_chalumnae
ENSFDAG00000016311	XRN2	99	73.117	ENSLOCG00000016874	xrn2	100	73.117	Lepisosteus_oculatus
ENSFDAG00000016311	XRN2	100	95.789	ENSLAFG00000014624	XRN2	100	95.789	Loxodonta_africana
ENSFDAG00000016311	XRN2	100	97.789	ENSMFAG00000038122	XRN2	100	97.789	Macaca_fascicularis
ENSFDAG00000016311	XRN2	100	97.789	ENSMMUG00000011405	XRN2	100	97.789	Macaca_mulatta
ENSFDAG00000016311	XRN2	100	97.684	ENSMNEG00000040626	XRN2	100	97.684	Macaca_nemestrina
ENSFDAG00000016311	XRN2	100	97.684	ENSMLEG00000041897	XRN2	100	97.684	Mandrillus_leucophaeus
ENSFDAG00000016311	XRN2	95	72.905	ENSMAMG00000008633	xrn2	98	71.384	Mastacembelus_armatus
ENSFDAG00000016311	XRN2	90	75.607	ENSMZEG00005022362	xrn2	97	75.607	Maylandia_zebra
ENSFDAG00000016311	XRN2	99	81.354	ENSMGAG00000003196	XRN2	99	81.354	Meleagris_gallopavo
ENSFDAG00000016311	XRN2	100	96.421	ENSMAUG00000021842	Xrn2	100	96.421	Mesocricetus_auratus
ENSFDAG00000016311	XRN2	100	97.053	ENSMICG00000008126	XRN2	100	97.053	Microcebus_murinus
ENSFDAG00000016311	XRN2	100	96.000	ENSMOCG00000012588	Xrn2	100	96.000	Microtus_ochrogaster
ENSFDAG00000016311	XRN2	89	73.998	ENSMMOG00000017576	xrn2	96	74.763	Mola_mola
ENSFDAG00000016311	XRN2	100	91.263	ENSMODG00000006163	XRN2	100	91.263	Monodelphis_domestica
ENSFDAG00000016311	XRN2	91	72.360	ENSMALG00000011355	xrn2	99	72.360	Monopterus_albus
ENSFDAG00000016311	XRN2	100	95.478	MGP_CAROLIEiJ_G0024400	Xrn2	100	95.478	Mus_caroli
ENSFDAG00000016311	XRN2	100	95.689	ENSMUSG00000027433	Xrn2	100	95.689	Mus_musculus
ENSFDAG00000016311	XRN2	100	95.478	MGP_PahariEiJ_G0025843	Xrn2	100	95.478	Mus_pahari
ENSFDAG00000016311	XRN2	100	95.689	MGP_SPRETEiJ_G0025318	Xrn2	100	95.689	Mus_spretus
ENSFDAG00000016311	XRN2	100	95.760	ENSMPUG00000001198	XRN2	93	95.760	Mustela_putorius_furo
ENSFDAG00000016311	XRN2	100	97.263	ENSMLUG00000001536	XRN2	100	97.263	Myotis_lucifugus
ENSFDAG00000016311	XRN2	100	96.737	ENSNGAG00000018138	Xrn2	100	96.737	Nannospalax_galili
ENSFDAG00000016311	XRN2	90	75.810	ENSNBRG00000008062	xrn2	97	75.810	Neolamprologus_brichardi
ENSFDAG00000016311	XRN2	100	97.684	ENSNLEG00000009991	XRN2	100	97.684	Nomascus_leucogenys
ENSFDAG00000016311	XRN2	66	97.778	ENSMEUG00000008622	-	67	97.778	Notamacropus_eugenii
ENSFDAG00000016311	XRN2	75	79.581	ENSOPRG00000001397	-	77	79.581	Ochotona_princeps
ENSFDAG00000016311	XRN2	100	98.316	ENSODEG00000010745	-	100	98.316	Octodon_degus
ENSFDAG00000016311	XRN2	98	89.320	ENSODEG00000000860	-	99	89.752	Octodon_degus
ENSFDAG00000016311	XRN2	100	71.546	ENSONIG00000018720	xrn2	100	71.753	Oreochromis_niloticus
ENSFDAG00000016311	XRN2	100	91.387	ENSOANG00000015673	XRN2	100	91.387	Ornithorhynchus_anatinus
ENSFDAG00000016311	XRN2	100	97.789	ENSOCUG00000013468	XRN2	100	97.789	Oryctolagus_cuniculus
ENSFDAG00000016311	XRN2	98	70.405	ENSORLG00000017213	xrn2	97	74.942	Oryzias_latipes
ENSFDAG00000016311	XRN2	98	70.405	ENSORLG00020001824	xrn2	100	70.061	Oryzias_latipes_hni
ENSFDAG00000016311	XRN2	98	70.301	ENSORLG00015019747	xrn2	100	69.959	Oryzias_latipes_hsok
ENSFDAG00000016311	XRN2	90	74.104	ENSOMEG00000019820	xrn2	100	69.645	Oryzias_melastigma
ENSFDAG00000016311	XRN2	100	96.635	ENSOGAG00000001068	XRN2	100	96.635	Otolemur_garnettii
ENSFDAG00000016311	XRN2	97	96.112	ENSOARG00000004443	XRN2	100	96.112	Ovis_aries
ENSFDAG00000016311	XRN2	100	97.895	ENSPPAG00000033549	XRN2	100	97.895	Pan_paniscus
ENSFDAG00000016311	XRN2	100	97.368	ENSPPRG00000008732	XRN2	100	97.368	Panthera_pardus
ENSFDAG00000016311	XRN2	97	97.297	ENSPTIG00000015683	XRN2	97	97.297	Panthera_tigris_altaica
ENSFDAG00000016311	XRN2	100	97.895	ENSPTRG00000013308	XRN2	100	97.895	Pan_troglodytes
ENSFDAG00000016311	XRN2	100	97.789	ENSPANG00000018088	XRN2	100	97.789	Papio_anubis
ENSFDAG00000016311	XRN2	100	71.136	ENSPKIG00000016889	xrn2	100	71.136	Paramormyrops_kingsleyae
ENSFDAG00000016311	XRN2	81	86.979	ENSPSIG00000014666	XRN2	100	86.979	Pelodiscus_sinensis
ENSFDAG00000016311	XRN2	100	95.895	ENSPEMG00000000111	Xrn2	100	95.895	Peromyscus_maniculatus_bairdii
ENSFDAG00000016311	XRN2	100	70.093	ENSPFOG00000004182	xrn2	99	70.497	Poecilia_formosa
ENSFDAG00000016311	XRN2	89	74.651	ENSPLAG00000007351	xrn2	96	74.651	Poecilia_latipinna
ENSFDAG00000016311	XRN2	94	68.444	ENSPMEG00000011798	xrn2	99	69.314	Poecilia_mexicana
ENSFDAG00000016311	XRN2	89	74.535	ENSPREG00000012452	xrn2	99	72.952	Poecilia_reticulata
ENSFDAG00000016311	XRN2	100	97.263	ENSPPYG00000010755	XRN2	100	97.263	Pongo_abelii
ENSFDAG00000016311	XRN2	100	90.651	ENSPCAG00000011191	XRN2	100	90.651	Procavia_capensis
ENSFDAG00000016311	XRN2	100	90.000	ENSPCOG00000016468	XRN2	100	90.000	Propithecus_coquereli
ENSFDAG00000016311	XRN2	93	95.137	ENSPVAG00000004596	XRN2	93	95.137	Pteropus_vampyrus
ENSFDAG00000016311	XRN2	90	73.642	ENSPNYG00000001765	xrn2	97	73.642	Pundamilia_nyererei
ENSFDAG00000016311	XRN2	100	71.429	ENSPNAG00000010956	xrn2	99	71.429	Pygocentrus_nattereri
ENSFDAG00000016311	XRN2	100	96.635	ENSRNOG00000011785	Xrn2	100	96.635	Rattus_norvegicus
ENSFDAG00000016311	XRN2	86	97.677	ENSRBIG00000036193	XRN2	100	97.677	Rhinopithecus_bieti
ENSFDAG00000016311	XRN2	100	97.789	ENSRROG00000044400	XRN2	90	97.789	Rhinopithecus_roxellana
ENSFDAG00000016311	XRN2	69	52.283	YOR048C	RAT1	63	53.846	Saccharomyces_cerevisiae
ENSFDAG00000016311	XRN2	100	97.368	ENSSBOG00000021014	XRN2	100	97.368	Saimiri_boliviensis_boliviensis
ENSFDAG00000016311	XRN2	100	71.930	ENSSFOG00015001091	xrn2	100	71.930	Scleropages_formosus
ENSFDAG00000016311	XRN2	92	73.251	ENSSMAG00000007834	xrn2	100	68.997	Scophthalmus_maximus
ENSFDAG00000016311	XRN2	91	72.059	ENSSDUG00000012802	xrn2	99	72.398	Seriola_dumerili
ENSFDAG00000016311	XRN2	93	73.672	ENSSLDG00000021273	xrn2	100	73.672	Seriola_lalandi_dorsalis
ENSFDAG00000016311	XRN2	76	100.000	ENSSARG00000005859	-	76	100.000	Sorex_araneus
ENSFDAG00000016311	XRN2	98	79.594	ENSSPUG00000005485	XRN2	96	79.701	Sphenodon_punctatus
ENSFDAG00000016311	XRN2	100	70.624	ENSSPAG00000016027	xrn2	99	70.624	Stegastes_partitus
ENSFDAG00000016311	XRN2	100	95.158	ENSSSCG00000007109	XRN2	100	95.158	Sus_scrofa
ENSFDAG00000016311	XRN2	100	81.837	ENSTGUG00000007535	XRN2	100	82.255	Taeniopygia_guttata
ENSFDAG00000016311	XRN2	100	68.416	ENSTRUG00000015489	xrn2	100	68.788	Takifugu_rubripes
ENSFDAG00000016311	XRN2	100	71.236	ENSTNIG00000010712	xrn2	100	71.236	Tetraodon_nigroviridis
ENSFDAG00000016311	XRN2	100	97.158	ENSTBEG00000004119	XRN2	100	97.158	Tupaia_belangeri
ENSFDAG00000016311	XRN2	93	97.117	ENSTTRG00000009087	XRN2	93	97.117	Tursiops_truncatus
ENSFDAG00000016311	XRN2	100	97.579	ENSUAMG00000024634	XRN2	100	97.579	Ursus_americanus
ENSFDAG00000016311	XRN2	97	97.297	ENSUMAG00000004012	XRN2	95	97.297	Ursus_maritimus
ENSFDAG00000016311	XRN2	89	89.822	ENSVPAG00000010694	XRN2	91	89.822	Vicugna_pacos
ENSFDAG00000016311	XRN2	100	97.474	ENSVVUG00000012178	XRN2	100	97.474	Vulpes_vulpes
ENSFDAG00000016311	XRN2	100	74.765	ENSXETG00000023501	xrn2	100	75.391	Xenopus_tropicalis
ENSFDAG00000016311	XRN2	100	68.654	ENSXMAG00000000242	xrn2	92	79.075	Xiphophorus_maculatus