EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000016326 (Gene tree)
Gene ID: 104862907
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 10354 bases
Position: chrKN122111.1:2558550-2568903
Accession: 104862907
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000007924	RRM_1	PF00076.22	1.1e-37	1	3
ENSFDAP00000007924	RRM_1	PF00076.22	1.1e-37	2	3
ENSFDAP00000007924	RRM_1	PF00076.22	1.1e-37	3	3
ENSFDAP00000007919	RRM_1	PF00076.22	1.8e-37	1	3
ENSFDAP00000007919	RRM_1	PF00076.22	1.8e-37	2	3
ENSFDAP00000007919	RRM_1	PF00076.22	1.8e-37	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000021081	RBM47-201	1566	-	ENSFDAP00000007924	521 (aa)	-	-
ENSFDAT00000029639	RBM47-202	1773	XM_010625136	ENSFDAP00000007919	590 (aa)	XP_010623438	UPI00053FF37A

Gene Model

Click here to download ENSFDAG00000016326's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000016326's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000016326	RBM47	58	67.667	ENSFDAG00000019281	-	56	67.667
ENSFDAG00000016326	RBM47	60	66.987	ENSFDAG00000006445	-	62	66.987
ENSFDAG00000016326	RBM47	73	57.906	ENSFDAG00000019371	A1CF	74	57.906
ENSFDAG00000016326	RBM47	57	52.492	ENSFDAG00000005861	SYNCRIP	79	44.743
ENSFDAG00000016326	RBM47	61	53.251	ENSFDAG00000016898	-	71	45.077
ENSFDAG00000016326	RBM47	59	50.473	ENSFDAG00000017441	-	78	46.617

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000016326	RBM47	100	92.773	ENSG00000163694	RBM47	100	94.400	Homo_sapiens
ENSFDAG00000016326	RBM47	100	76.167	ENSAPOG00000011062	rbm47	100	81.432	Acanthochromis_polyacanthus
ENSFDAG00000016326	RBM47	100	91.625	ENSAMEG00000009672	RBM47	100	92.462	Ailuropoda_melanoleuca
ENSFDAG00000016326	RBM47	100	81.963	ENSACIG00000011531	rbm47	100	81.963	Amphilophus_citrinellus
ENSFDAG00000016326	RBM47	100	76.717	ENSAOCG00000022245	rbm47	100	81.432	Amphiprion_ocellaris
ENSFDAG00000016326	RBM47	100	76.510	ENSAPEG00000018304	rbm47	100	81.432	Amphiprion_percula
ENSFDAG00000016326	RBM47	100	79.949	ENSATEG00000018400	rbm47	100	79.949	Anabas_testudineus
ENSFDAG00000016326	RBM47	100	85.185	ENSAPLG00000013974	RBM47	100	85.185	Anas_platyrhynchos
ENSFDAG00000016326	RBM47	100	82.972	ENSACAG00000011833	RBM47	100	83.667	Anolis_carolinensis
ENSFDAG00000016326	RBM47	100	92.941	ENSANAG00000029440	RBM47	100	94.400	Aotus_nancymaae
ENSFDAG00000016326	RBM47	100	80.620	ENSACLG00000016902	rbm47	100	80.620	Astatotilapia_calliptera
ENSFDAG00000016326	RBM47	100	74.632	ENSAMXG00000021794	rbm47	100	78.718	Astyanax_mexicanus
ENSFDAG00000016326	RBM47	100	94.595	ENSBTAG00000002356	RBM47	100	94.595	Bos_taurus
ENSFDAG00000016326	RBM47	100	92.724	ENSCJAG00000019385	RBM47	100	94.133	Callithrix_jacchus
ENSFDAG00000016326	RBM47	96	91.579	ENSCAFG00000015898	RBM47	100	90.909	Canis_familiaris
ENSFDAG00000016326	RBM47	83	93.265	ENSCAFG00020010558	RBM47	94	90.716	Canis_lupus_dingo
ENSFDAG00000016326	RBM47	100	94.932	ENSCHIG00000026214	RBM47	100	94.932	Capra_hircus
ENSFDAG00000016326	RBM47	86	89.381	ENSTSYG00000033612	RBM47	92	89.381	Carlito_syrichta
ENSFDAG00000016326	RBM47	100	90.541	ENSCAPG00000008426	RBM47	100	91.216	Cavia_aperea
ENSFDAG00000016326	RBM47	100	95.200	ENSCPOG00000014100	RBM47	100	95.200	Cavia_porcellus
ENSFDAG00000016326	RBM47	99	66.442	ENSCCAG00000024397	-	99	66.442	Cebus_capucinus
ENSFDAG00000016326	RBM47	100	93.063	ENSCCAG00000030129	-	100	94.667	Cebus_capucinus
ENSFDAG00000016326	RBM47	100	93.390	ENSCATG00000042064	RBM47	100	94.400	Cercocebus_atys
ENSFDAG00000016326	RBM47	100	94.585	ENSCLAG00000001684	RBM47	100	94.667	Chinchilla_lanigera
ENSFDAG00000016326	RBM47	100	92.941	ENSCSAG00000017060	RBM47	100	93.277	Chlorocebus_sabaeus
ENSFDAG00000016326	RBM47	89	86.937	ENSCHOG00000011731	RBM47	88	88.750	Choloepus_hoffmanni
ENSFDAG00000016326	RBM47	100	89.096	ENSCPBG00000013831	RBM47	100	87.940	Chrysemys_picta_bellii
ENSFDAG00000016326	RBM47	100	93.390	ENSCANG00000019997	RBM47	100	94.400	Colobus_angolensis_palliatus
ENSFDAG00000016326	RBM47	100	84.952	ENSCGRG00001020102	-	100	87.037	Cricetulus_griseus_chok1gshd
ENSFDAG00000016326	RBM47	100	89.782	ENSCGRG00001000623	-	100	91.489	Cricetulus_griseus_chok1gshd
ENSFDAG00000016326	RBM47	100	88.945	ENSCGRG00000007762	-	100	88.777	Cricetulus_griseus_crigri
ENSFDAG00000016326	RBM47	100	84.571	ENSCGRG00000014760	-	100	86.508	Cricetulus_griseus_crigri
ENSFDAG00000016326	RBM47	100	74.161	ENSCSEG00000004545	rbm47	100	74.497	Cynoglossus_semilaevis
ENSFDAG00000016326	RBM47	100	78.005	ENSCVAG00000020144	rbm47	100	79.540	Cyprinodon_variegatus
ENSFDAG00000016326	RBM47	100	75.534	ENSDARG00000061985	rbm47	100	75.783	Danio_rerio
ENSFDAG00000016326	RBM47	100	90.863	ENSDNOG00000046854	RBM47	100	92.555	Dasypus_novemcinctus
ENSFDAG00000016326	RBM47	100	91.973	ENSDORG00000010144	Rbm47	100	92.140	Dipodomys_ordii
ENSFDAG00000016326	RBM47	97	92.414	ENSETEG00000009194	RBM47	100	91.625	Echinops_telfairi
ENSFDAG00000016326	RBM47	99	56.977	ENSEBUG00000011912	rbm47	95	72.911	Eptatretus_burgeri
ENSFDAG00000016326	RBM47	100	92.568	ENSEASG00005008443	RBM47	100	94.088	Equus_asinus_asinus
ENSFDAG00000016326	RBM47	100	92.568	ENSECAG00000004400	RBM47	100	94.088	Equus_caballus
ENSFDAG00000016326	RBM47	75	90.043	ENSEEUG00000001194	RBM47	75	91.342	Erinaceus_europaeus
ENSFDAG00000016326	RBM47	100	79.747	ENSELUG00000006148	rbm47	100	79.597	Esox_lucius
ENSFDAG00000016326	RBM47	100	94.068	ENSFCAG00000012399	RBM47	100	94.576	Felis_catus
ENSFDAG00000016326	RBM47	100	87.248	ENSFALG00000002861	RBM47	100	87.752	Ficedula_albicollis
ENSFDAG00000016326	RBM47	100	75.253	ENSFHEG00000007938	rbm47	100	75.253	Fundulus_heteroclitus
ENSFDAG00000016326	RBM47	100	78.987	ENSGMOG00000014802	rbm47	100	73.420	Gadus_morhua
ENSFDAG00000016326	RBM47	72	88.564	ENSGALG00000014267	RBM47	99	88.564	Gallus_gallus
ENSFDAG00000016326	RBM47	72	80.533	ENSGAFG00000020571	rbm47	98	80.533	Gambusia_affinis
ENSFDAG00000016326	RBM47	100	77.749	ENSGACG00000016223	rbm47	100	77.749	Gasterosteus_aculeatus
ENSFDAG00000016326	RBM47	100	89.096	ENSGAGG00000020051	RBM47	100	88.107	Gopherus_agassizii
ENSFDAG00000016326	RBM47	100	93.390	ENSGGOG00000001367	RBM47	100	94.400	Gorilla_gorilla
ENSFDAG00000016326	RBM47	100	80.620	ENSHBUG00000003520	rbm47	100	80.620	Haplochromis_burtoni
ENSFDAG00000016326	RBM47	100	74.713	ENSHGLG00000016914	RBM47	100	93.038	Heterocephalus_glaber_female
ENSFDAG00000016326	RBM47	100	84.095	ENSHGLG00100003071	-	100	83.926	Heterocephalus_glaber_male
ENSFDAG00000016326	RBM47	100	95.093	ENSHGLG00100014028	-	100	95.093	Heterocephalus_glaber_male
ENSFDAG00000016326	RBM47	99	76.094	ENSHCOG00000002074	rbm47	99	79.540	Hippocampus_comes
ENSFDAG00000016326	RBM47	100	78.295	ENSIPUG00000004743	rbm47	100	79.733	Ictalurus_punctatus
ENSFDAG00000016326	RBM47	100	93.277	ENSSTOG00000004727	RBM47	100	93.109	Ictidomys_tridecemlineatus
ENSFDAG00000016326	RBM47	100	89.950	ENSJJAG00000013823	Rbm47	100	91.122	Jaculus_jaculus
ENSFDAG00000016326	RBM47	100	78.316	ENSKMAG00000000084	rbm47	100	78.827	Kryptolebias_marmoratus
ENSFDAG00000016326	RBM47	100	76.884	ENSLBEG00000008436	rbm47	100	76.884	Labrus_bergylta
ENSFDAG00000016326	RBM47	100	84.615	ENSLACG00000007196	RBM47	100	82.997	Latimeria_chalumnae
ENSFDAG00000016326	RBM47	100	79.933	ENSLOCG00000012966	rbm47	95	79.798	Lepisosteus_oculatus
ENSFDAG00000016326	RBM47	100	92.605	ENSLAFG00000011998	RBM47	100	92.101	Loxodonta_africana
ENSFDAG00000016326	RBM47	100	93.390	ENSMFAG00000037967	RBM47	100	94.400	Macaca_fascicularis
ENSFDAG00000016326	RBM47	100	92.941	ENSMMUG00000012036	RBM47	100	93.277	Macaca_mulatta
ENSFDAG00000016326	RBM47	100	93.220	ENSMNEG00000040774	RBM47	100	93.559	Macaca_nemestrina
ENSFDAG00000016326	RBM47	100	94.921	ENSMLEG00000041432	RBM47	100	94.921	Mandrillus_leucophaeus
ENSFDAG00000016326	RBM47	100	75.453	ENSMAMG00000019143	rbm47	100	80.412	Mastacembelus_armatus
ENSFDAG00000016326	RBM47	100	80.620	ENSMZEG00005023659	rbm47	100	80.620	Maylandia_zebra
ENSFDAG00000016326	RBM47	100	87.124	ENSMGAG00000012226	RBM47	100	87.479	Meleagris_gallopavo
ENSFDAG00000016326	RBM47	100	89.933	ENSMAUG00000006493	Rbm47	100	91.512	Mesocricetus_auratus
ENSFDAG00000016326	RBM47	100	87.288	ENSMICG00000026417	RBM47	100	88.475	Microcebus_murinus
ENSFDAG00000016326	RBM47	100	90.252	ENSMOCG00000021170	Rbm47	100	91.755	Microtus_ochrogaster
ENSFDAG00000016326	RBM47	100	75.783	ENSMMOG00000007260	rbm47	100	79.381	Mola_mola
ENSFDAG00000016326	RBM47	100	79.153	ENSMODG00000020561	-	100	79.153	Monodelphis_domestica
ENSFDAG00000016326	RBM47	60	77.603	ENSMODG00000015426	-	99	77.603	Monodelphis_domestica
ENSFDAG00000016326	RBM47	100	87.858	ENSMODG00000007003	RBM47	100	88.364	Monodelphis_domestica
ENSFDAG00000016326	RBM47	100	75.966	ENSMALG00000005167	rbm47	100	81.600	Monopterus_albus
ENSFDAG00000016326	RBM47	100	90.067	MGP_CAROLIEiJ_G0027258	Rbm47	100	91.223	Mus_caroli
ENSFDAG00000016326	RBM47	100	90.404	ENSMUSG00000070780	Rbm47	100	91.489	Mus_musculus
ENSFDAG00000016326	RBM47	100	90.404	MGP_PahariEiJ_G0017040	Rbm47	100	91.489	Mus_pahari
ENSFDAG00000016326	RBM47	100	90.863	MGP_SPRETEiJ_G0028253	Rbm47	100	91.709	Mus_spretus
ENSFDAG00000016326	RBM47	100	92.929	ENSMPUG00000006177	RBM47	94	93.603	Mustela_putorius_furo
ENSFDAG00000016326	RBM47	100	91.047	ENSMLUG00000000889	RBM47	100	91.723	Myotis_lucifugus
ENSFDAG00000016326	RBM47	100	90.436	ENSNGAG00000003325	Rbm47	100	91.107	Nannospalax_galili
ENSFDAG00000016326	RBM47	100	80.879	ENSNBRG00000015092	rbm47	100	80.879	Neolamprologus_brichardi
ENSFDAG00000016326	RBM47	100	93.220	ENSNLEG00000017151	RBM47	100	94.400	Nomascus_leucogenys
ENSFDAG00000016326	RBM47	69	90.223	ENSMEUG00000009516	-	99	84.543	Notamacropus_eugenii
ENSFDAG00000016326	RBM47	84	96.680	ENSOPRG00000016507	-	74	96.680	Ochotona_princeps
ENSFDAG00000016326	RBM47	100	94.416	ENSODEG00000004873	RBM47	100	94.416	Octodon_degus
ENSFDAG00000016326	RBM47	100	79.231	ENSONIG00000009061	rbm47	100	79.744	Oreochromis_niloticus
ENSFDAG00000016326	RBM47	100	84.087	ENSOANG00000008978	RBM47	100	85.260	Ornithorhynchus_anatinus
ENSFDAG00000016326	RBM47	100	93.750	ENSOCUG00000012034	RBM47	100	94.088	Oryctolagus_cuniculus
ENSFDAG00000016326	RBM47	100	79.692	ENSORLG00000005847	rbm47	100	79.692	Oryzias_latipes
ENSFDAG00000016326	RBM47	100	79.692	ENSORLG00020005154	rbm47	100	79.692	Oryzias_latipes_hni
ENSFDAG00000016326	RBM47	100	79.949	ENSORLG00015000066	rbm47	100	79.949	Oryzias_latipes_hsok
ENSFDAG00000016326	RBM47	100	76.263	ENSOMEG00000010730	rbm47	100	81.333	Oryzias_melastigma
ENSFDAG00000016326	RBM47	100	92.593	ENSOGAG00000029367	-	100	93.266	Otolemur_garnettii
ENSFDAG00000016326	RBM47	100	84.915	ENSOGAG00000025193	-	100	85.593	Otolemur_garnettii
ENSFDAG00000016326	RBM47	100	84.459	ENSOARG00000012711	RBM47	100	85.811	Ovis_aries
ENSFDAG00000016326	RBM47	100	93.220	ENSPPAG00000029763	RBM47	100	93.559	Pan_paniscus
ENSFDAG00000016326	RBM47	100	91.695	ENSPPRG00000012873	RBM47	100	94.133	Panthera_pardus
ENSFDAG00000016326	RBM47	85	92.216	ENSPTIG00000017046	RBM47	100	92.415	Panthera_tigris_altaica
ENSFDAG00000016326	RBM47	100	93.390	ENSPTRG00000016006	RBM47	100	94.400	Pan_troglodytes
ENSFDAG00000016326	RBM47	100	93.390	ENSPANG00000005980	RBM47	100	94.400	Papio_anubis
ENSFDAG00000016326	RBM47	100	74.535	ENSPKIG00000013431	RBM47	98	74.349	Paramormyrops_kingsleyae
ENSFDAG00000016326	RBM47	97	75.692	ENSPKIG00000005037	rbm47	100	79.373	Paramormyrops_kingsleyae
ENSFDAG00000016326	RBM47	89	88.447	ENSPSIG00000017516	RBM47	97	88.258	Pelodiscus_sinensis
ENSFDAG00000016326	RBM47	100	76.094	ENSPMGG00000018540	rbm47	100	76.263	Periophthalmus_magnuspinnatus
ENSFDAG00000016326	RBM47	100	90.268	ENSPEMG00000011088	Rbm47	100	91.755	Peromyscus_maniculatus_bairdii
ENSFDAG00000016326	RBM47	100	77.136	ENSPFOG00000007997	rbm47	100	78.426	Poecilia_formosa
ENSFDAG00000016326	RBM47	100	76.884	ENSPLAG00000002072	rbm47	100	80.267	Poecilia_latipinna
ENSFDAG00000016326	RBM47	100	80.533	ENSPMEG00000017492	rbm47	100	80.533	Poecilia_mexicana
ENSFDAG00000016326	RBM47	100	78.261	ENSPREG00000008456	rbm47	100	80.533	Poecilia_reticulata
ENSFDAG00000016326	RBM47	98	79.357	ENSPPYG00000014688	RBM47	100	79.019	Pongo_abelii
ENSFDAG00000016326	RBM47	89	93.194	ENSPCAG00000011879	RBM47	81	94.250	Procavia_capensis
ENSFDAG00000016326	RBM47	100	89.661	ENSPCOG00000023451	RBM47	100	90.678	Propithecus_coquereli
ENSFDAG00000016326	RBM47	100	90.588	ENSPVAG00000003812	RBM47	100	92.101	Pteropus_vampyrus
ENSFDAG00000016326	RBM47	100	80.362	ENSPNYG00000022868	rbm47	100	80.620	Pundamilia_nyererei
ENSFDAG00000016326	RBM47	100	74.877	ENSPNAG00000007940	rbm47	100	79.124	Pygocentrus_nattereri
ENSFDAG00000016326	RBM47	100	90.572	ENSRNOG00000002408	Rbm47	100	91.077	Rattus_norvegicus
ENSFDAG00000016326	RBM47	100	93.559	ENSRBIG00000039601	RBM47	100	94.667	Rhinopithecus_bieti
ENSFDAG00000016326	RBM47	100	93.559	ENSRROG00000044696	RBM47	100	94.667	Rhinopithecus_roxellana
ENSFDAG00000016326	RBM47	100	90.000	ENSSBOG00000028475	RBM47	100	94.628	Saimiri_boliviensis_boliviensis
ENSFDAG00000016326	RBM47	100	89.171	ENSSHAG00000017576	RBM47	100	89.679	Sarcophilus_harrisii
ENSFDAG00000016326	RBM47	100	71.854	ENSSFOG00015012445	rbm47	100	71.476	Scleropages_formosus
ENSFDAG00000016326	RBM47	100	73.322	ENSSFOG00015024101	RBM47	100	78.133	Scleropages_formosus
ENSFDAG00000016326	RBM47	100	74.056	ENSSMAG00000009744	rbm47	100	78.406	Scophthalmus_maximus
ENSFDAG00000016326	RBM47	100	77.441	ENSSDUG00000022684	rbm47	100	81.867	Seriola_dumerili
ENSFDAG00000016326	RBM47	100	78.987	ENSSLDG00000003109	rbm47	100	78.987	Seriola_lalandi_dorsalis
ENSFDAG00000016326	RBM47	85	92.188	ENSSARG00000001735	RBM47	84	93.527	Sorex_araneus
ENSFDAG00000016326	RBM47	100	85.497	ENSSPUG00000007515	RBM47	100	86.933	Sphenodon_punctatus
ENSFDAG00000016326	RBM47	100	77.685	ENSSPAG00000001257	rbm47	100	82.493	Stegastes_partitus
ENSFDAG00000016326	RBM47	100	92.905	ENSSSCG00000008796	RBM47	100	93.750	Sus_scrofa
ENSFDAG00000016326	RBM47	100	87.059	ENSTGUG00000008705	RBM47	100	87.563	Taeniopygia_guttata
ENSFDAG00000016326	RBM47	98	75.597	ENSTRUG00000014050	rbm47	100	75.726	Takifugu_rubripes
ENSFDAG00000016326	RBM47	100	75.329	ENSTNIG00000006127	rbm47	100	75.453	Tetraodon_nigroviridis
ENSFDAG00000016326	RBM47	87	87.733	ENSTBEG00000001607	RBM47	76	88.267	Tupaia_belangeri
ENSFDAG00000016326	RBM47	100	92.217	ENSTTRG00000002839	RBM47	100	93.232	Tursiops_truncatus
ENSFDAG00000016326	RBM47	100	93.266	ENSUAMG00000021346	RBM47	100	93.098	Ursus_americanus
ENSFDAG00000016326	RBM47	57	93.085	ENSVPAG00000000641	-	57	94.681	Vicugna_pacos
ENSFDAG00000016326	RBM47	96	92.619	ENSVVUG00000014774	RBM47	100	91.737	Vulpes_vulpes
ENSFDAG00000016326	RBM47	100	83.502	ENSXETG00000012802	rbm47	100	83.333	Xenopus_tropicalis
ENSFDAG00000016326	RBM47	100	74.857	ENSXCOG00000000780	rbm47	100	80.267	Xiphophorus_couchianus
ENSFDAG00000016326	RBM47	100	80.267	ENSXMAG00000009874	rbm47	100	80.267	Xiphophorus_maculatus