EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000016670 (Gene tree)
Gene ID: 104856390
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 199366 bases
Position: chrKN125406.1:672158-871523
Accession: 104856390
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000008379	S1	PF00575.23	4.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000029718	SRBD1-201	2868	XM_010615760	ENSFDAP00000008379	955 (aa)	XP_010614062	-

Gene Model

Click here to download ENSFDAG00000016670's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000016670's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000016670	SRBD1	98	87.006	ENSG00000068784	SRBD1	98	86.742	Homo_sapiens
ENSFDAG00000016670	SRBD1	99	52.568	ENSAPOG00000005103	si:ch211-117n7.8	98	52.568	Acanthochromis_polyacanthus
ENSFDAG00000016670	SRBD1	98	88.866	ENSAMEG00000005993	SRBD1	98	88.580	Ailuropoda_melanoleuca
ENSFDAG00000016670	SRBD1	97	53.725	ENSACIG00000009875	si:ch211-117n7.8	96	53.935	Amphilophus_citrinellus
ENSFDAG00000016670	SRBD1	99	52.798	ENSAOCG00000024718	si:ch211-117n7.8	98	52.798	Amphiprion_ocellaris
ENSFDAG00000016670	SRBD1	97	53.733	ENSAPEG00000002645	si:ch211-117n7.8	96	53.733	Amphiprion_percula
ENSFDAG00000016670	SRBD1	85	58.244	ENSATEG00000010844	si:ch211-117n7.8	98	53.360	Anabas_testudineus
ENSFDAG00000016670	SRBD1	97	72.539	ENSAPLG00000006313	SRBD1	98	71.850	Anas_platyrhynchos
ENSFDAG00000016670	SRBD1	98	86.694	ENSANAG00000025573	SRBD1	98	86.434	Aotus_nancymaae
ENSFDAG00000016670	SRBD1	99	51.542	ENSACLG00000024219	si:ch211-117n7.8	93	53.403	Astatotilapia_calliptera
ENSFDAG00000016670	SRBD1	95	58.505	ENSAMXG00000004294	SRBD1	93	58.140	Astyanax_mexicanus
ENSFDAG00000016670	SRBD1	98	87.214	ENSBTAG00000007508	SRBD1	97	85.789	Bos_taurus
ENSFDAG00000016670	SRBD1	98	86.175	ENSCJAG00000000727	SRBD1	99	85.163	Callithrix_jacchus
ENSFDAG00000016670	SRBD1	98	88.382	ENSCAFG00000002554	SRBD1	98	88.103	Canis_familiaris
ENSFDAG00000016670	SRBD1	98	85.358	ENSCAFG00020026284	SRBD1	99	92.399	Canis_lupus_dingo
ENSFDAG00000016670	SRBD1	98	87.110	ENSCHIG00000016535	SRBD1	96	86.845	Capra_hircus
ENSFDAG00000016670	SRBD1	98	88.509	ENSTSYG00000012797	SRBD1	98	88.308	Carlito_syrichta
ENSFDAG00000016670	SRBD1	99	92.437	ENSCPOG00000004773	SRBD1	98	92.437	Cavia_porcellus
ENSFDAG00000016670	SRBD1	98	87.422	ENSCCAG00000025589	SRBD1	99	86.382	Cebus_capucinus
ENSFDAG00000016670	SRBD1	98	87.734	ENSCATG00000039530	SRBD1	99	86.687	Cercocebus_atys
ENSFDAG00000016670	SRBD1	98	93.592	ENSCLAG00000008623	SRBD1	97	93.592	Chinchilla_lanigera
ENSFDAG00000016670	SRBD1	98	87.838	ENSCSAG00000013350	SRBD1	99	86.789	Chlorocebus_sabaeus
ENSFDAG00000016670	SRBD1	86	94.268	ENSCHOG00000003805	SRBD1	84	94.268	Choloepus_hoffmanni
ENSFDAG00000016670	SRBD1	97	74.027	ENSCPBG00000005677	SRBD1	98	73.367	Chrysemys_picta_bellii
ENSFDAG00000016670	SRBD1	80	42.638	ENSCING00000005950	-	99	42.638	Ciona_intestinalis
ENSFDAG00000016670	SRBD1	80	43.984	ENSCSAVG00000000861	-	99	43.984	Ciona_savignyi
ENSFDAG00000016670	SRBD1	98	86.722	ENSCANG00000016307	SRBD1	99	85.772	Colobus_angolensis_palliatus
ENSFDAG00000016670	SRBD1	99	85.774	ENSCGRG00001000513	Srbd1	98	85.774	Cricetulus_griseus_chok1gshd
ENSFDAG00000016670	SRBD1	99	85.774	ENSCGRG00000002283	Srbd1	98	85.774	Cricetulus_griseus_crigri
ENSFDAG00000016670	SRBD1	85	57.297	ENSCSEG00000000856	si:ch211-117n7.8	84	57.416	Cynoglossus_semilaevis
ENSFDAG00000016670	SRBD1	85	58.916	ENSCVAG00000020212	si:ch211-117n7.8	89	58.916	Cyprinodon_variegatus
ENSFDAG00000016670	SRBD1	98	87.913	ENSDNOG00000018686	SRBD1	98	87.718	Dasypus_novemcinctus
ENSFDAG00000016670	SRBD1	99	87.161	ENSDORG00000010468	Srbd1	98	87.161	Dipodomys_ordii
ENSFDAG00000016670	SRBD1	80	37.707	FBgn0051156	CG31156	79	37.962	Drosophila_melanogaster
ENSFDAG00000016670	SRBD1	90	82.696	ENSETEG00000000739	SRBD1	92	82.878	Echinops_telfairi
ENSFDAG00000016670	SRBD1	74	48.343	ENSEBUG00000008902	si:ch211-117n7.8	96	48.343	Eptatretus_burgeri
ENSFDAG00000016670	SRBD1	98	85.566	ENSEASG00005003132	SRBD1	97	94.268	Equus_asinus_asinus
ENSFDAG00000016670	SRBD1	98	88.993	ENSECAG00000013865	SRBD1	96	88.706	Equus_caballus
ENSFDAG00000016670	SRBD1	98	55.567	ENSELUG00000012592	si:ch211-117n7.8	92	55.567	Esox_lucius
ENSFDAG00000016670	SRBD1	98	88.266	ENSFCAG00000005101	SRBD1	98	87.988	Felis_catus
ENSFDAG00000016670	SRBD1	99	70.124	ENSFALG00000012966	SRBD1	98	70.124	Ficedula_albicollis
ENSFDAG00000016670	SRBD1	97	54.498	ENSFHEG00000019480	si:ch211-117n7.8	92	54.498	Fundulus_heteroclitus
ENSFDAG00000016670	SRBD1	50	54.481	ENSGMOG00000018010	-	100	54.481	Gadus_morhua
ENSFDAG00000016670	SRBD1	97	72.029	ENSGALG00000009990	SRBD1	98	71.723	Gallus_gallus
ENSFDAG00000016670	SRBD1	89	56.264	ENSGAFG00000019664	si:ch211-117n7.8	97	52.347	Gambusia_affinis
ENSFDAG00000016670	SRBD1	63	60.800	ENSGACG00000010794	si:ch211-117n7.8	100	60.960	Gasterosteus_aculeatus
ENSFDAG00000016670	SRBD1	85	80.456	ENSGAGG00000006166	SRBD1	100	80.456	Gopherus_agassizii
ENSFDAG00000016670	SRBD1	98	87.087	ENSGGOG00000005910	SRBD1	100	87.087	Gorilla_gorilla
ENSFDAG00000016670	SRBD1	95	47.511	ENSHBUG00000013207	si:ch211-117n7.8	99	46.543	Haplochromis_burtoni
ENSFDAG00000016670	SRBD1	99	94.142	ENSHGLG00000018153	-	98	94.142	Heterocephalus_glaber_female
ENSFDAG00000016670	SRBD1	99	94.038	ENSHGLG00100015183	-	98	94.038	Heterocephalus_glaber_male
ENSFDAG00000016670	SRBD1	97	57.844	ENSIPUG00000009661	srbd1	95	58.102	Ictalurus_punctatus
ENSFDAG00000016670	SRBD1	99	90.700	ENSSTOG00000005898	SRBD1	98	90.700	Ictidomys_tridecemlineatus
ENSFDAG00000016670	SRBD1	98	80.878	ENSJJAG00000022244	Srbd1	97	80.878	Jaculus_jaculus
ENSFDAG00000016670	SRBD1	99	52.319	ENSKMAG00000003473	si:ch211-117n7.8	98	52.319	Kryptolebias_marmoratus
ENSFDAG00000016670	SRBD1	99	52.372	ENSLBEG00000027518	si:ch211-117n7.8	98	52.372	Labrus_bergylta
ENSFDAG00000016670	SRBD1	86	70.024	ENSLACG00000009790	SRBD1	99	70.024	Latimeria_chalumnae
ENSFDAG00000016670	SRBD1	97	59.129	ENSLOCG00000016360	si:ch211-117n7.8	98	58.257	Lepisosteus_oculatus
ENSFDAG00000016670	SRBD1	98	87.838	ENSMFAG00000042026	SRBD1	99	86.789	Macaca_fascicularis
ENSFDAG00000016670	SRBD1	98	87.734	ENSMMUG00000003490	SRBD1	99	86.687	Macaca_mulatta
ENSFDAG00000016670	SRBD1	98	85.031	ENSMNEG00000034701	SRBD1	99	84.045	Macaca_nemestrina
ENSFDAG00000016670	SRBD1	98	87.630	ENSMLEG00000000745	SRBD1	99	86.585	Mandrillus_leucophaeus
ENSFDAG00000016670	SRBD1	99	50.907	ENSMAMG00000021921	si:ch211-117n7.8	98	51.224	Mastacembelus_armatus
ENSFDAG00000016670	SRBD1	97	53.298	ENSMZEG00005027369	si:ch211-117n7.8	93	53.403	Maylandia_zebra
ENSFDAG00000016670	SRBD1	81	75.313	ENSMGAG00000010273	SRBD1	100	75.313	Meleagris_gallopavo
ENSFDAG00000016670	SRBD1	82	84.311	ENSMAUG00000013916	Srbd1	99	84.311	Mesocricetus_auratus
ENSFDAG00000016670	SRBD1	98	88.669	ENSMICG00000007835	SRBD1	98	88.386	Microcebus_murinus
ENSFDAG00000016670	SRBD1	99	84.401	ENSMOCG00000018716	Srbd1	98	84.401	Microtus_ochrogaster
ENSFDAG00000016670	SRBD1	91	55.879	ENSMMOG00000007507	si:ch211-117n7.8	93	55.879	Mola_mola
ENSFDAG00000016670	SRBD1	99	52.616	ENSMALG00000001562	si:ch211-117n7.8	98	52.817	Monopterus_albus
ENSFDAG00000016670	SRBD1	98	84.000	MGP_CAROLIEiJ_G0021934	Srbd1	99	83.333	Mus_caroli
ENSFDAG00000016670	SRBD1	99	83.958	ENSMUSG00000024135	Srbd1	99	83.673	Mus_musculus
ENSFDAG00000016670	SRBD1	99	82.292	MGP_PahariEiJ_G0020924	Srbd1	98	82.292	Mus_pahari
ENSFDAG00000016670	SRBD1	99	83.750	MGP_SPRETEiJ_G0022850	Srbd1	98	83.750	Mus_spretus
ENSFDAG00000016670	SRBD1	98	85.774	ENSMLUG00000007039	SRBD1	98	85.524	Myotis_lucifugus
ENSFDAG00000016670	SRBD1	98	83.671	ENSNGAG00000011893	Srbd1	97	83.671	Nannospalax_galili
ENSFDAG00000016670	SRBD1	85	56.815	ENSNBRG00000012873	si:ch211-117n7.8	99	51.224	Neolamprologus_brichardi
ENSFDAG00000016670	SRBD1	98	87.110	ENSNLEG00000016877	SRBD1	99	86.077	Nomascus_leucogenys
ENSFDAG00000016670	SRBD1	99	90.651	ENSODEG00000012095	SRBD1	97	90.651	Octodon_degus
ENSFDAG00000016670	SRBD1	99	51.590	ENSONIG00000000945	si:ch211-117n7.8	100	58.223	Oreochromis_niloticus
ENSFDAG00000016670	SRBD1	98	90.084	ENSOCUG00000015385	SRBD1	98	89.886	Oryctolagus_cuniculus
ENSFDAG00000016670	SRBD1	87	54.133	ENSORLG00000004427	si:ch211-117n7.8	84	54.133	Oryzias_latipes
ENSFDAG00000016670	SRBD1	87	56.944	ENSORLG00020012792	si:ch211-117n7.8	84	56.977	Oryzias_latipes_hni
ENSFDAG00000016670	SRBD1	87	56.810	ENSORLG00015018598	si:ch211-117n7.8	84	56.810	Oryzias_latipes_hsok
ENSFDAG00000016670	SRBD1	97	52.411	ENSOMEG00000012229	si:ch211-117n7.8	93	52.516	Oryzias_melastigma
ENSFDAG00000016670	SRBD1	99	82.080	ENSOGAG00000001076	SRBD1	98	82.080	Otolemur_garnettii
ENSFDAG00000016670	SRBD1	98	82.548	ENSOARG00000005958	SRBD1	98	82.341	Ovis_aries
ENSFDAG00000016670	SRBD1	98	87.318	ENSPPAG00000038442	SRBD1	99	86.280	Pan_paniscus
ENSFDAG00000016670	SRBD1	98	88.462	ENSPPRG00000003449	SRBD1	98	88.181	Panthera_pardus
ENSFDAG00000016670	SRBD1	98	88.565	ENSPTIG00000012495	SRBD1	98	88.284	Panthera_tigris_altaica
ENSFDAG00000016670	SRBD1	98	87.214	ENSPTRG00000011889	SRBD1	99	86.179	Pan_troglodytes
ENSFDAG00000016670	SRBD1	98	87.422	ENSPANG00000008063	SRBD1	99	86.382	Papio_anubis
ENSFDAG00000016670	SRBD1	99	53.611	ENSPKIG00000021973	si:ch211-117n7.8	99	53.611	Paramormyrops_kingsleyae
ENSFDAG00000016670	SRBD1	94	75.682	ENSPSIG00000008992	SRBD1	98	73.733	Pelodiscus_sinensis
ENSFDAG00000016670	SRBD1	90	53.575	ENSPMGG00000013348	si:ch211-117n7.8	99	50.907	Periophthalmus_magnuspinnatus
ENSFDAG00000016670	SRBD1	99	83.740	ENSPEMG00000020684	Srbd1	98	83.740	Peromyscus_maniculatus_bairdii
ENSFDAG00000016670	SRBD1	96	54.497	ENSPFOG00000010650	si:ch211-117n7.8	93	54.497	Poecilia_formosa
ENSFDAG00000016670	SRBD1	99	52.674	ENSPLAG00000002141	si:ch211-117n7.8	97	52.674	Poecilia_latipinna
ENSFDAG00000016670	SRBD1	96	54.497	ENSPMEG00000018537	si:ch211-117n7.8	93	54.497	Poecilia_mexicana
ENSFDAG00000016670	SRBD1	86	57.683	ENSPREG00000003258	si:ch211-117n7.8	86	57.683	Poecilia_reticulata
ENSFDAG00000016670	SRBD1	98	79.746	ENSPPYG00000012444	SRBD1	98	78.927	Pongo_abelii
ENSFDAG00000016670	SRBD1	83	82.234	ENSPCAG00000005629	SRBD1	86	82.234	Procavia_capensis
ENSFDAG00000016670	SRBD1	98	75.440	ENSPCOG00000017669	SRBD1	98	75.307	Propithecus_coquereli
ENSFDAG00000016670	SRBD1	98	77.755	ENSPVAG00000001782	SRBD1	98	77.595	Pteropus_vampyrus
ENSFDAG00000016670	SRBD1	88	53.497	ENSPNYG00000000508	si:ch211-117n7.8	96	50.909	Pundamilia_nyererei
ENSFDAG00000016670	SRBD1	97	57.627	ENSPNAG00000013492	SRBD1	94	58.051	Pygocentrus_nattereri
ENSFDAG00000016670	SRBD1	98	82.737	ENSRNOG00000014720	Srbd1	97	82.658	Rattus_norvegicus
ENSFDAG00000016670	SRBD1	98	87.318	ENSRBIG00000033486	SRBD1	99	86.280	Rhinopithecus_bieti
ENSFDAG00000016670	SRBD1	98	87.318	ENSRROG00000041599	SRBD1	99	86.280	Rhinopithecus_roxellana
ENSFDAG00000016670	SRBD1	98	86.694	ENSSBOG00000024982	SRBD1	99	85.671	Saimiri_boliviensis_boliviensis
ENSFDAG00000016670	SRBD1	85	61.267	ENSSFOG00015001128	si:ch211-117n7.8	90	61.267	Scleropages_formosus
ENSFDAG00000016670	SRBD1	96	53.797	ENSSMAG00000018256	si:ch211-117n7.8	92	53.692	Scophthalmus_maximus
ENSFDAG00000016670	SRBD1	87	56.567	ENSSLDG00000023189	si:ch211-117n7.8	86	56.567	Seriola_lalandi_dorsalis
ENSFDAG00000016670	SRBD1	98	79.202	ENSSARG00000009740	SRBD1	99	78.638	Sorex_araneus
ENSFDAG00000016670	SRBD1	86	79.496	ENSSPUG00000010475	SRBD1	100	72.970	Sphenodon_punctatus
ENSFDAG00000016670	SRBD1	90	53.872	ENSSPAG00000008092	-	95	51.670	Stegastes_partitus
ENSFDAG00000016670	SRBD1	98	88.266	ENSSSCG00000008445	SRBD1	96	87.988	Sus_scrofa
ENSFDAG00000016670	SRBD1	85	77.470	ENSTGUG00000003878	SRBD1	100	77.470	Taeniopygia_guttata
ENSFDAG00000016670	SRBD1	99	52.252	ENSTRUG00000007080	si:ch211-117n7.8	96	57.159	Takifugu_rubripes
ENSFDAG00000016670	SRBD1	99	50.549	ENSTNIG00000007464	si:ch211-117n7.8	98	50.549	Tetraodon_nigroviridis
ENSFDAG00000016670	SRBD1	79	98.936	ENSTBEG00000004556	SRBD1	78	98.936	Tupaia_belangeri
ENSFDAG00000016670	SRBD1	91	92.857	ENSTTRG00000011871	SRBD1	90	92.857	Tursiops_truncatus
ENSFDAG00000016670	SRBD1	98	88.889	ENSUAMG00000008126	SRBD1	98	86.996	Ursus_americanus
ENSFDAG00000016670	SRBD1	98	88.993	ENSUMAG00000012902	SRBD1	96	88.706	Ursus_maritimus
ENSFDAG00000016670	SRBD1	92	88.852	ENSVPAG00000006825	SRBD1	100	88.852	Vicugna_pacos
ENSFDAG00000016670	SRBD1	98	88.577	ENSVVUG00000005389	SRBD1	98	88.296	Vulpes_vulpes
ENSFDAG00000016670	SRBD1	99	52.071	ENSXETG00000002760	srbd1	98	52.668	Xenopus_tropicalis
ENSFDAG00000016670	SRBD1	99	51.923	ENSXMAG00000016861	si:ch211-117n7.8	97	51.923	Xiphophorus_maculatus