EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000016818 (Gene tree)
Gene ID: 104851451
Gene Symbol: SYNJ1
Alias: INPP5G|PARK20
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 88027 bases
Position: chrKN124353.1:10840093-10928119
Accession: 104851451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000008551	Exo_endo_phos	PF03372.23	3.5e-15	1	1
ENSFDAP00000008566	Exo_endo_phos	PF03372.23	1.1e-07	1	1
ENSFDAP00000008551	DUF1866	PF08952.11	3.6e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000029749	SYNJ1-202	5198	XM_019205174	ENSFDAP00000008566	693 (aa)	XP_019060719	-
ENSFDAT00000021627	SYNJ1-201	4076	XM_010608638	ENSFDAP00000008551	1311 (aa)	XP_010606940	UPI0008FF3B75

Gene Model

Click here to download ENSFDAG00000016818's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000016818's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000016818	SYNJ1	96	59.910	ENSFDAG00000016352	SYNJ2	87	53.361

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000016818	SYNJ1	100	98.413	ENSG00000159082	SYNJ1	100	97.753	Homo_sapiens
ENSFDAG00000016818	SYNJ1	100	83.453	ENSAPOG00000002809	synj1	94	70.053	Acanthochromis_polyacanthus
ENSFDAG00000016818	SYNJ1	100	96.719	ENSAMEG00000015028	SYNJ1	81	94.559	Ailuropoda_melanoleuca
ENSFDAG00000016818	SYNJ1	100	79.568	ENSACIG00000008857	synj1	95	65.962	Amphilophus_citrinellus
ENSFDAG00000016818	SYNJ1	100	83.309	ENSAOCG00000009835	synj1	95	68.028	Amphiprion_ocellaris
ENSFDAG00000016818	SYNJ1	100	83.309	ENSAPEG00000021010	synj1	75	67.592	Amphiprion_percula
ENSFDAG00000016818	SYNJ1	100	82.590	ENSATEG00000002306	synj1	73	68.658	Anabas_testudineus
ENSFDAG00000016818	SYNJ1	100	91.761	ENSAPLG00000011832	SYNJ1	83	84.075	Anas_platyrhynchos
ENSFDAG00000016818	SYNJ1	100	90.585	ENSACAG00000003006	-	100	83.283	Anolis_carolinensis
ENSFDAG00000016818	SYNJ1	100	98.124	ENSANAG00000027325	SYNJ1	100	93.979	Aotus_nancymaae
ENSFDAG00000016818	SYNJ1	100	82.590	ENSACLG00000002255	synj1	100	66.546	Astatotilapia_calliptera
ENSFDAG00000016818	SYNJ1	100	82.902	ENSAMXG00000008208	synj1	79	67.285	Astyanax_mexicanus
ENSFDAG00000016818	SYNJ1	100	97.835	ENSBTAG00000003063	SYNJ1	100	93.252	Bos_taurus
ENSFDAG00000016818	SYNJ1	100	98.413	ENSCJAG00000009187	SYNJ1	100	93.979	Callithrix_jacchus
ENSFDAG00000016818	SYNJ1	100	97.980	ENSCAFG00000009041	SYNJ1	99	88.855	Canis_familiaris
ENSFDAG00000016818	SYNJ1	100	98.413	ENSCAFG00020025776	SYNJ1	98	89.397	Canis_lupus_dingo
ENSFDAG00000016818	SYNJ1	100	97.835	ENSCHIG00000005095	SYNJ1	84	91.571	Capra_hircus
ENSFDAG00000016818	SYNJ1	100	97.835	ENSTSYG00000014541	SYNJ1	100	93.059	Carlito_syrichta
ENSFDAG00000016818	SYNJ1	89	88.357	ENSCAPG00000014483	SYNJ1	85	79.542	Cavia_aperea
ENSFDAG00000016818	SYNJ1	100	98.268	ENSCPOG00000012182	SYNJ1	100	95.728	Cavia_porcellus
ENSFDAG00000016818	SYNJ1	100	98.124	ENSCCAG00000020825	SYNJ1	100	93.750	Cebus_capucinus
ENSFDAG00000016818	SYNJ1	100	98.557	ENSCATG00000033891	SYNJ1	100	94.050	Cercocebus_atys
ENSFDAG00000016818	SYNJ1	100	98.701	ENSCLAG00000009796	SYNJ1	100	98.701	Chinchilla_lanigera
ENSFDAG00000016818	SYNJ1	100	96.862	ENSCSAG00000009654	SYNJ1	100	95.347	Chlorocebus_sabaeus
ENSFDAG00000016818	SYNJ1	83	100.000	ENSCHOG00000012390	SYNJ1	69	91.857	Choloepus_hoffmanni
ENSFDAG00000016818	SYNJ1	100	93.074	ENSCPBG00000006402	SYNJ1	97	87.722	Chrysemys_picta_bellii
ENSFDAG00000016818	SYNJ1	100	98.557	ENSCANG00000031359	SYNJ1	100	94.203	Colobus_angolensis_palliatus
ENSFDAG00000016818	SYNJ1	100	97.114	ENSCGRG00001010861	Synj1	100	93.364	Cricetulus_griseus_chok1gshd
ENSFDAG00000016818	SYNJ1	100	97.114	ENSCGRG00000015749	Synj1	100	97.114	Cricetulus_griseus_crigri
ENSFDAG00000016818	SYNJ1	100	81.650	ENSCSEG00000019614	synj1	99	68.812	Cynoglossus_semilaevis
ENSFDAG00000016818	SYNJ1	100	77.641	ENSCVAG00000019250	synj1	100	65.431	Cyprinodon_variegatus
ENSFDAG00000016818	SYNJ1	100	82.077	ENSDARG00000025011	synj1	100	68.073	Danio_rerio
ENSFDAG00000016818	SYNJ1	100	89.802	ENSDNOG00000010732	SYNJ1	84	89.909	Dasypus_novemcinctus
ENSFDAG00000016818	SYNJ1	100	98.413	ENSDORG00000014735	-	100	98.413	Dipodomys_ordii
ENSFDAG00000016818	SYNJ1	86	96.739	ENSETEG00000018674	SYNJ1	73	96.739	Echinops_telfairi
ENSFDAG00000016818	SYNJ1	100	98.268	ENSEASG00005006287	SYNJ1	98	94.075	Equus_asinus_asinus
ENSFDAG00000016818	SYNJ1	100	98.124	ENSECAG00000004829	SYNJ1	100	90.030	Equus_caballus
ENSFDAG00000016818	SYNJ1	83	100.000	ENSEEUG00000005150	SYNJ1	79	88.743	Erinaceus_europaeus
ENSFDAG00000016818	SYNJ1	100	82.014	ENSELUG00000009731	synj1	94	64.555	Esox_lucius
ENSFDAG00000016818	SYNJ1	100	98.124	ENSFCAG00000012498	SYNJ1	100	93.607	Felis_catus
ENSFDAG00000016818	SYNJ1	74	77.426	ENSFALG00000004680	SYNJ1	78	77.111	Ficedula_albicollis
ENSFDAG00000016818	SYNJ1	93	79.421	ENSGMOG00000014852	synj1	77	72.718	Gadus_morhua
ENSFDAG00000016818	SYNJ1	100	93.074	ENSGALG00000034317	SYNJ1	82	80.670	Gallus_gallus
ENSFDAG00000016818	SYNJ1	100	82.302	ENSGAFG00000019466	synj1	76	67.221	Gambusia_affinis
ENSFDAG00000016818	SYNJ1	98	76.445	ENSGACG00000020575	synj1	94	63.643	Gasterosteus_aculeatus
ENSFDAG00000016818	SYNJ1	100	93.362	ENSGAGG00000022523	SYNJ1	100	85.489	Gopherus_agassizii
ENSFDAG00000016818	SYNJ1	100	98.413	ENSGGOG00000015945	SYNJ1	100	93.974	Gorilla_gorilla
ENSFDAG00000016818	SYNJ1	100	81.223	ENSHBUG00000007774	synj1	100	66.546	Haplochromis_burtoni
ENSFDAG00000016818	SYNJ1	100	98.846	ENSHGLG00000006420	SYNJ1	100	98.846	Heterocephalus_glaber_female
ENSFDAG00000016818	SYNJ1	100	98.846	ENSHGLG00100012591	SYNJ1	100	98.846	Heterocephalus_glaber_male
ENSFDAG00000016818	SYNJ1	100	77.554	ENSHCOG00000012774	synj1	95	65.349	Hippocampus_comes
ENSFDAG00000016818	SYNJ1	100	83.165	ENSIPUG00000010691	SYNJ1	83	70.000	Ictalurus_punctatus
ENSFDAG00000016818	SYNJ1	100	98.557	ENSSTOG00000015806	SYNJ1	100	96.186	Ictidomys_tridecemlineatus
ENSFDAG00000016818	SYNJ1	98	89.002	ENSJJAG00000020168	Synj1	82	88.966	Jaculus_jaculus
ENSFDAG00000016818	SYNJ1	100	82.590	ENSKMAG00000004221	synj1	93	72.448	Kryptolebias_marmoratus
ENSFDAG00000016818	SYNJ1	100	81.674	ENSLBEG00000015081	synj1	82	74.955	Labrus_bergylta
ENSFDAG00000016818	SYNJ1	100	86.544	ENSLACG00000005928	SYNJ1	82	76.947	Latimeria_chalumnae
ENSFDAG00000016818	SYNJ1	100	84.353	ENSLOCG00000009230	synj1	86	77.469	Lepisosteus_oculatus
ENSFDAG00000016818	SYNJ1	100	95.863	ENSLAFG00000011806	SYNJ1	83	93.297	Loxodonta_africana
ENSFDAG00000016818	SYNJ1	98	94.379	ENSMFAG00000018883	SYNJ1	99	95.043	Macaca_fascicularis
ENSFDAG00000016818	SYNJ1	100	97.290	ENSMMUG00000004624	SYNJ1	100	95.053	Macaca_mulatta
ENSFDAG00000016818	SYNJ1	100	98.557	ENSMNEG00000040077	SYNJ1	94	95.271	Macaca_nemestrina
ENSFDAG00000016818	SYNJ1	100	98.557	ENSMLEG00000037029	SYNJ1	100	94.203	Mandrillus_leucophaeus
ENSFDAG00000016818	SYNJ1	100	83.165	ENSMAMG00000013404	synj1	79	66.861	Mastacembelus_armatus
ENSFDAG00000016818	SYNJ1	100	82.590	ENSMZEG00005024358	synj1	100	66.065	Maylandia_zebra
ENSFDAG00000016818	SYNJ1	100	89.675	ENSMGAG00000014522	SYNJ1	83	83.849	Meleagris_gallopavo
ENSFDAG00000016818	SYNJ1	100	96.825	ENSMAUG00000009743	Synj1	100	96.825	Mesocricetus_auratus
ENSFDAG00000016818	SYNJ1	100	98.268	ENSMICG00000034953	SYNJ1	100	93.516	Microcebus_murinus
ENSFDAG00000016818	SYNJ1	100	81.418	ENSMMOG00000010203	synj1	96	67.413	Mola_mola
ENSFDAG00000016818	SYNJ1	100	86.305	ENSMODG00000021073	SYNJ1	100	80.623	Monodelphis_domestica
ENSFDAG00000016818	SYNJ1	100	83.022	ENSMALG00000014015	synj1	77	68.045	Monopterus_albus
ENSFDAG00000016818	SYNJ1	100	97.835	MGP_CAROLIEiJ_G0020951	Synj1	100	97.835	Mus_caroli
ENSFDAG00000016818	SYNJ1	100	98.268	ENSMUSG00000022973	Synj1	100	98.268	Mus_musculus
ENSFDAG00000016818	SYNJ1	100	97.980	MGP_PahariEiJ_G0016656	Synj1	100	97.980	Mus_pahari
ENSFDAG00000016818	SYNJ1	100	97.980	MGP_SPRETEiJ_G0021857	Synj1	100	97.980	Mus_spretus
ENSFDAG00000016818	SYNJ1	100	96.879	ENSMPUG00000001153	SYNJ1	83	93.902	Mustela_putorius_furo
ENSFDAG00000016818	SYNJ1	62	83.966	ENSMLUG00000005764	-	76	83.966	Myotis_lucifugus
ENSFDAG00000016818	SYNJ1	94	94.640	ENSMLUG00000026584	-	100	94.519	Myotis_lucifugus
ENSFDAG00000016818	SYNJ1	100	97.547	ENSNGAG00000000453	Synj1	100	97.547	Nannospalax_galili
ENSFDAG00000016818	SYNJ1	100	82.734	ENSNBRG00000011936	synj1	80	71.493	Neolamprologus_brichardi
ENSFDAG00000016818	SYNJ1	88	90.762	ENSNLEG00000003734	SYNJ1	100	88.952	Nomascus_leucogenys
ENSFDAG00000016818	SYNJ1	89	79.828	ENSMEUG00000004158	-	73	76.630	Notamacropus_eugenii
ENSFDAG00000016818	SYNJ1	100	91.155	ENSOPRG00000013602	SYNJ1	75	93.537	Ochotona_princeps
ENSFDAG00000016818	SYNJ1	100	97.980	ENSODEG00000002409	-	100	97.980	Octodon_degus
ENSFDAG00000016818	SYNJ1	100	81.508	ENSONIG00000004667	synj1	90	71.462	Oreochromis_niloticus
ENSFDAG00000016818	SYNJ1	94	91.964	ENSOANG00000006929	SYNJ1	83	84.443	Ornithorhynchus_anatinus
ENSFDAG00000016818	SYNJ1	100	96.434	ENSOCUG00000001420	SYNJ1	83	90.575	Oryctolagus_cuniculus
ENSFDAG00000016818	SYNJ1	100	81.583	ENSORLG00000004320	synj1	92	68.450	Oryzias_latipes
ENSFDAG00000016818	SYNJ1	100	78.094	ENSORLG00020011994	synj1	95	67.954	Oryzias_latipes_hni
ENSFDAG00000016818	SYNJ1	100	82.302	ENSOMEG00000014322	synj1	96	67.757	Oryzias_melastigma
ENSFDAG00000016818	SYNJ1	100	89.833	ENSOGAG00000006010	SYNJ1	81	89.833	Otolemur_garnettii
ENSFDAG00000016818	SYNJ1	100	96.170	ENSOARG00000013414	SYNJ1	81	93.140	Ovis_aries
ENSFDAG00000016818	SYNJ1	100	98.413	ENSPPAG00000026784	SYNJ1	100	94.355	Pan_paniscus
ENSFDAG00000016818	SYNJ1	100	98.268	ENSPPRG00000023469	SYNJ1	100	93.531	Panthera_pardus
ENSFDAG00000016818	SYNJ1	100	98.124	ENSPTIG00000007930	SYNJ1	100	93.455	Panthera_tigris_altaica
ENSFDAG00000016818	SYNJ1	100	98.413	ENSPTRG00000048135	-	100	90.411	Pan_troglodytes
ENSFDAG00000016818	SYNJ1	100	98.413	ENSPTRG00000023787	SYNJ1	100	94.355	Pan_troglodytes
ENSFDAG00000016818	SYNJ1	100	98.557	ENSPANG00000022531	SYNJ1	100	95.347	Papio_anubis
ENSFDAG00000016818	SYNJ1	100	84.460	ENSPKIG00000022603	synj1	95	75.891	Paramormyrops_kingsleyae
ENSFDAG00000016818	SYNJ1	100	82.590	ENSPMGG00000016831	synj1	89	66.320	Periophthalmus_magnuspinnatus
ENSFDAG00000016818	SYNJ1	100	97.258	ENSPEMG00000018767	Synj1	100	97.258	Peromyscus_maniculatus_bairdii
ENSFDAG00000016818	SYNJ1	100	64.266	ENSPMAG00000002887	synj1	96	53.092	Petromyzon_marinus
ENSFDAG00000016818	SYNJ1	100	92.929	ENSPCIG00000016372	SYNJ1	100	86.591	Phascolarctos_cinereus
ENSFDAG00000016818	SYNJ1	100	81.250	ENSPFOG00000016886	synj1	94	66.071	Poecilia_formosa
ENSFDAG00000016818	SYNJ1	100	82.158	ENSPLAG00000017559	synj1	95	65.660	Poecilia_latipinna
ENSFDAG00000016818	SYNJ1	100	81.727	ENSPMEG00000007643	synj1	77	66.943	Poecilia_mexicana
ENSFDAG00000016818	SYNJ1	100	82.302	ENSPREG00000012412	synj1	96	67.879	Poecilia_reticulata
ENSFDAG00000016818	SYNJ1	100	96.862	ENSPPYG00000011365	SYNJ1	94	94.661	Pongo_abelii
ENSFDAG00000016818	SYNJ1	87	94.286	ENSPCAG00000009906	SYNJ1	72	94.286	Procavia_capensis
ENSFDAG00000016818	SYNJ1	93	90.842	ENSPCOG00000024841	SYNJ1	95	90.842	Propithecus_coquereli
ENSFDAG00000016818	SYNJ1	100	96.576	ENSPVAG00000000892	SYNJ1	83	89.655	Pteropus_vampyrus
ENSFDAG00000016818	SYNJ1	100	82.590	ENSPNYG00000022989	synj1	100	65.623	Pundamilia_nyererei
ENSFDAG00000016818	SYNJ1	100	82.878	ENSPNAG00000021119	synj1	89	77.994	Pygocentrus_nattereri
ENSFDAG00000016818	SYNJ1	100	96.862	ENSRNOG00000002051	Synj1	100	93.683	Rattus_norvegicus
ENSFDAG00000016818	SYNJ1	100	98.413	ENSRBIG00000034477	SYNJ1	100	94.050	Rhinopithecus_bieti
ENSFDAG00000016818	SYNJ1	100	97.004	ENSRROG00000039256	SYNJ1	100	94.203	Rhinopithecus_roxellana
ENSFDAG00000016818	SYNJ1	100	98.557	ENSSBOG00000021001	SYNJ1	100	93.826	Saimiri_boliviensis_boliviensis
ENSFDAG00000016818	SYNJ1	100	92.208	ENSSHAG00000008538	SYNJ1	84	84.015	Sarcophilus_harrisii
ENSFDAG00000016818	SYNJ1	100	83.309	ENSSFOG00015006095	synj1	83	68.125	Scleropages_formosus
ENSFDAG00000016818	SYNJ1	100	82.446	ENSSMAG00000018066	synj1	97	65.573	Scophthalmus_maximus
ENSFDAG00000016818	SYNJ1	100	83.309	ENSSDUG00000013058	synj1	77	67.895	Seriola_dumerili
ENSFDAG00000016818	SYNJ1	100	82.878	ENSSLDG00000021406	synj1	96	68.604	Seriola_lalandi_dorsalis
ENSFDAG00000016818	SYNJ1	76	94.953	ENSSARG00000009490	SYNJ1	60	96.805	Sorex_araneus
ENSFDAG00000016818	SYNJ1	100	93.506	ENSSPUG00000012552	SYNJ1	82	81.217	Sphenodon_punctatus
ENSFDAG00000016818	SYNJ1	100	83.309	ENSSPAG00000017029	synj1	93	66.346	Stegastes_partitus
ENSFDAG00000016818	SYNJ1	89	83.119	ENSSPAG00000006812	SYNJ1	74	67.013	Stegastes_partitus
ENSFDAG00000016818	SYNJ1	100	98.557	ENSSSCG00000012035	SYNJ1	100	93.328	Sus_scrofa
ENSFDAG00000016818	SYNJ1	100	91.218	ENSTGUG00000013445	SYNJ1	83	83.321	Taeniopygia_guttata
ENSFDAG00000016818	SYNJ1	100	82.302	ENSTRUG00000006907	synj1	96	67.568	Takifugu_rubripes
ENSFDAG00000016818	SYNJ1	100	76.718	ENSTNIG00000009940	synj1	96	67.656	Tetraodon_nigroviridis
ENSFDAG00000016818	SYNJ1	92	97.326	ENSTBEG00000016298	SYNJ1	75	87.154	Tupaia_belangeri
ENSFDAG00000016818	SYNJ1	100	89.586	ENSTTRG00000002222	SYNJ1	83	82.241	Tursiops_truncatus
ENSFDAG00000016818	SYNJ1	100	98.413	ENSUAMG00000018606	SYNJ1	99	96.258	Ursus_americanus
ENSFDAG00000016818	SYNJ1	100	98.413	ENSUMAG00000018419	SYNJ1	99	96.258	Ursus_maritimus
ENSFDAG00000016818	SYNJ1	87	100.000	ENSVPAG00000001241	SYNJ1	70	100.000	Vicugna_pacos
ENSFDAG00000016818	SYNJ1	100	98.557	ENSVVUG00000023125	SYNJ1	100	94.813	Vulpes_vulpes
ENSFDAG00000016818	SYNJ1	100	84.986	ENSXETG00000009899	synj1	84	77.004	Xenopus_tropicalis
ENSFDAG00000016818	SYNJ1	100	81.081	ENSXCOG00000011896	synj1	96	69.350	Xiphophorus_couchianus
ENSFDAG00000016818	SYNJ1	100	80.797	ENSXMAG00000017524	synj1	100	66.667	Xiphophorus_maculatus