EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000016841 (Gene tree)
Gene ID: -
Gene Symbol: GTF3A
Alias: AP2|TFIIIA
Full Name: general transcription factor IIIA
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 7937 bases
Position: chrKN122100.1:2128481-2136417
Accession: 104862181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000008561	zf-C2H2	PF00096.26	2e-37	1	6
ENSFDAP00000008561	zf-C2H2	PF00096.26	2e-37	2	6
ENSFDAP00000008561	zf-C2H2	PF00096.26	2e-37	3	6
ENSFDAP00000008561	zf-C2H2	PF00096.26	2e-37	4	6
ENSFDAP00000008561	zf-C2H2	PF00096.26	2e-37	5	6
ENSFDAP00000008561	zf-C2H2	PF00096.26	2e-37	6	6
ENSFDAP00000008561	zf-met	PF12874.7	6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000021637	GTF3A-201	975	XM_010623950	ENSFDAP00000008561	324 (aa)	XP_010622252	-

Gene Model

Click here to download ENSFDAG00000016841's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000016841's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000016841	GTF3A	81	36.177	ENSFDAG00000005609	-	70	36.226
ENSFDAG00000016841	GTF3A	62	37.069	ENSFDAG00000019296	-	99	37.069
ENSFDAG00000016841	GTF3A	80	38.255	ENSFDAG00000006075	-	99	38.255
ENSFDAG00000016841	GTF3A	82	44.186	ENSFDAG00000007103	ZNF236	57	44.186
ENSFDAG00000016841	GTF3A	81	35.338	ENSFDAG00000020138	-	69	37.815
ENSFDAG00000016841	GTF3A	90	30.000	ENSFDAG00000010005	ZFP64	72	30.263
ENSFDAG00000016841	GTF3A	88	36.301	ENSFDAG00000021361	PRDM5	74	31.353
ENSFDAG00000016841	GTF3A	86	41.358	ENSFDAG00000010369	-	83	36.923
ENSFDAG00000016841	GTF3A	85	31.788	ENSFDAG00000020159	ZNF319	84	31.373
ENSFDAG00000016841	GTF3A	85	39.024	ENSFDAG00000008687	-	89	38.866
ENSFDAG00000016841	GTF3A	84	35.361	ENSFDAG00000009594	-	74	35.361
ENSFDAG00000016841	GTF3A	91	33.700	ENSFDAG00000015190	-	76	34.432
ENSFDAG00000016841	GTF3A	92	42.105	ENSFDAG00000008733	SCRT1	88	42.105
ENSFDAG00000016841	GTF3A	86	39.437	ENSFDAG00000015590	ZNF235	65	39.437
ENSFDAG00000016841	GTF3A	78	34.483	ENSFDAG00000016958	SNAI2	50	34.483
ENSFDAG00000016841	GTF3A	89	35.496	ENSFDAG00000008114	ZNF81	66	35.496
ENSFDAG00000016841	GTF3A	90	33.974	ENSFDAG00000013872	ZIC1	81	34.783
ENSFDAG00000016841	GTF3A	85	34.071	ENSFDAG00000008549	ZNF2	50	34.328
ENSFDAG00000016841	GTF3A	82	37.838	ENSFDAG00000014929	ZIC3	70	34.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000016841	GTF3A	94	84.868	ENSAMEG00000015824	GTF3A	85	84.887	Ailuropoda_melanoleuca
ENSFDAG00000016841	GTF3A	96	83.013	ENSBTAG00000012600	GTF3A	87	83.333	Bos_taurus
ENSFDAG00000016841	GTF3A	96	86.218	ENSCAFG00000006794	GTF3A	85	85.897	Canis_familiaris
ENSFDAG00000016841	GTF3A	96	83.923	ENSCHIG00000010341	-	87	83.601	Capra_hircus
ENSFDAG00000016841	GTF3A	96	83.974	ENSCHIG00000021040	-	73	83.654	Capra_hircus
ENSFDAG00000016841	GTF3A	85	86.182	ENSTSYG00000004206	GTF3A	81	86.861	Carlito_syrichta
ENSFDAG00000016841	GTF3A	89	87.500	ENSCAPG00000015862	GTF3A	99	87.500	Cavia_aperea
ENSFDAG00000016841	GTF3A	100	86.890	ENSCPOG00000010143	GTF3A	99	86.890	Cavia_porcellus
ENSFDAG00000016841	GTF3A	99	89.164	ENSCLAG00000003912	GTF3A	98	89.164	Chinchilla_lanigera
ENSFDAG00000016841	GTF3A	94	83.607	ENSDNOG00000037405	-	74	83.654	Dasypus_novemcinctus
ENSFDAG00000016841	GTF3A	96	82.584	ENSETEG00000003225	GTF3A	63	82.584	Echinops_telfairi
ENSFDAG00000016841	GTF3A	94	85.526	ENSEASG00005022495	-	69	85.852	Equus_asinus_asinus
ENSFDAG00000016841	GTF3A	95	72.816	ENSEASG00005013216	-	81	72.816	Equus_asinus_asinus
ENSFDAG00000016841	GTF3A	94	86.184	ENSECAG00000014803	GTF3A	71	87.705	Equus_caballus
ENSFDAG00000016841	GTF3A	85	82.014	ENSECAG00000024825	-	67	80.069	Equus_caballus
ENSFDAG00000016841	GTF3A	94	81.848	ENSEEUG00000004307	GTF3A	82	81.731	Erinaceus_europaeus
ENSFDAG00000016841	GTF3A	96	85.531	ENSFCAG00000006982	GTF3A	72	85.852	Felis_catus
ENSFDAG00000016841	GTF3A	96	94.855	ENSHGLG00000004173	GTF3A	97	94.855	Heterocephalus_glaber_female
ENSFDAG00000016841	GTF3A	96	94.855	ENSHGLG00100011561	GTF3A	97	94.855	Heterocephalus_glaber_male
ENSFDAG00000016841	GTF3A	96	90.032	ENSSTOG00000013853	GTF3A	99	90.032	Ictidomys_tridecemlineatus
ENSFDAG00000016841	GTF3A	84	84.585	ENSJJAG00000011501	Gtf3a	92	80.392	Jaculus_jaculus
ENSFDAG00000016841	GTF3A	96	77.532	ENSLAFG00000027315	GTF3A	85	77.532	Loxodonta_africana
ENSFDAG00000016841	GTF3A	96	83.601	ENSMAUG00000016253	Gtf3a	84	83.280	Mesocricetus_auratus
ENSFDAG00000016841	GTF3A	94	85.855	ENSMICG00000014763	GTF3A	84	86.174	Microcebus_murinus
ENSFDAG00000016841	GTF3A	100	81.231	MGP_CAROLIEiJ_G0028031	Gtf3a	94	80.923	Mus_caroli
ENSFDAG00000016841	GTF3A	100	80.923	ENSMUSG00000016503	Gtf3a	94	80.615	Mus_musculus
ENSFDAG00000016841	GTF3A	96	83.601	MGP_PahariEiJ_G0024597	Gtf3a	91	83.280	Mus_pahari
ENSFDAG00000016841	GTF3A	100	80.923	MGP_SPRETEiJ_G0029029	Gtf3a	95	80.615	Mus_spretus
ENSFDAG00000016841	GTF3A	94	86.842	ENSMPUG00000005835	GTF3A	84	86.817	Mustela_putorius_furo
ENSFDAG00000016841	GTF3A	93	86.379	ENSMLUG00000002158	GTF3A	92	86.364	Myotis_lucifugus
ENSFDAG00000016841	GTF3A	94	88.816	ENSNLEG00000000331	GTF3A	87	87.117	Nomascus_leucogenys
ENSFDAG00000016841	GTF3A	85	59.124	ENSMEUG00000010089	GTF3A	85	57.785	Notamacropus_eugenii
ENSFDAG00000016841	GTF3A	96	76.527	ENSOPRG00000000854	-	78	76.527	Ochotona_princeps
ENSFDAG00000016841	GTF3A	96	92.605	ENSODEG00000006725	GTF3A	73	92.605	Octodon_degus
ENSFDAG00000016841	GTF3A	96	84.244	ENSOCUG00000011713	GTF3A	76	84.244	Oryctolagus_cuniculus
ENSFDAG00000016841	GTF3A	94	86.513	ENSOGAG00000014589	GTF3A	85	86.495	Otolemur_garnettii
ENSFDAG00000016841	GTF3A	96	78.526	ENSOARG00000012551	GTF3A	85	78.205	Ovis_aries
ENSFDAG00000016841	GTF3A	96	86.174	ENSPPRG00000002368	GTF3A	85	85.852	Panthera_pardus
ENSFDAG00000016841	GTF3A	85	86.885	ENSPTIG00000018958	GTF3A	67	86.885	Panthera_tigris_altaica
ENSFDAG00000016841	GTF3A	85	53.110	ENSPSIG00000011722	GTF3A	75	53.110	Pelodiscus_sinensis
ENSFDAG00000016841	GTF3A	92	89.262	ENSPPYG00000005235	GTF3A	85	89.508	Pongo_abelii
ENSFDAG00000016841	GTF3A	94	86.230	ENSPCOG00000016742	GTF3A	70	86.174	Propithecus_coquereli
ENSFDAG00000016841	GTF3A	96	82.315	ENSPVAG00000012837	GTF3A	73	82.315	Pteropus_vampyrus
ENSFDAG00000016841	GTF3A	94	80.263	ENSRROG00000043264	GTF3A	84	80.707	Rhinopithecus_roxellana
ENSFDAG00000016841	GTF3A	85	81.159	ENSSHAG00000016965	GTF3A	78	81.752	Sarcophilus_harrisii
ENSFDAG00000016841	GTF3A	96	75.241	ENSSARG00000010692	GTF3A	86	75.241	Sorex_araneus
ENSFDAG00000016841	GTF3A	90	69.388	ENSSPUG00000005307	GTF3A	75	71.942	Sphenodon_punctatus
ENSFDAG00000016841	GTF3A	89	45.704	ENSTRUG00000005241	gtf3ab	87	46.179	Takifugu_rubripes
ENSFDAG00000016841	GTF3A	85	88.934	ENSTBEG00000012075	GTF3A	58	88.934	Tupaia_belangeri
ENSFDAG00000016841	GTF3A	96	78.846	ENSTTRG00000008538	GTF3A	75	78.457	Tursiops_truncatus
ENSFDAG00000016841	GTF3A	94	85.855	ENSUAMG00000019189	GTF3A	87	84.663	Ursus_americanus
ENSFDAG00000016841	GTF3A	93	84.385	ENSUMAG00000016941	GTF3A	99	84.053	Ursus_maritimus
ENSFDAG00000016841	GTF3A	82	88.608	ENSVPAG00000004995	GTF3A	82	88.934	Vicugna_pacos
ENSFDAG00000016841	GTF3A	96	85.256	ENSVVUG00000009197	GTF3A	86	84.936	Vulpes_vulpes