EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000016913 (Gene tree)
Gene ID: -
Gene Symbol: SRRM3
Alias: FLJ37078
Full Name: serine/arginine repetitive matrix 3
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 35072 bases
Position: chrKN121778.1:1258770-1293841
Accession: 104858735
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000008708	cwf21	PF08312.12	1.8e-17	1	1
ENSFDAP00000008701	cwf21	PF08312.12	4.7e-16	1	1
ENSFDAP00000008701	SRRM_C	PF15230.6	4.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000021773	SRRM3-202	2937	XM_010619059	ENSFDAP00000008708	81 (aa)	XP_019062274	-
ENSFDAT00000021771	SRRM3-201	1593	-	ENSFDAP00000008701	530 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000016913's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000016913's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000016913	SRRM3	99	97.500	ENSG00000177679	SRRM3	95	53.282	Homo_sapiens
ENSFDAG00000016913	SRRM3	100	93.827	ENSBTAG00000007879	-	62	69.608	Bos_taurus
ENSFDAG00000016913	SRRM3	100	97.531	ENSCJAG00000016307	SRRM3	95	53.740	Callithrix_jacchus
ENSFDAG00000016913	SRRM3	100	93.827	ENSCAFG00000013537	SRRM3	56	62.445	Canis_familiaris
ENSFDAG00000016913	SRRM3	63	94.118	ENSCPOG00000038685	SRRM3	73	95.082	Cavia_porcellus
ENSFDAG00000016913	SRRM3	100	97.531	ENSCCAG00000033359	SRRM3	65	91.954	Cebus_capucinus
ENSFDAG00000016913	SRRM3	100	96.296	ENSCATG00000043129	SRRM3	95	53.584	Cercocebus_atys
ENSFDAG00000016913	SRRM3	100	97.531	ENSCLAG00000007682	SRRM3	72	96.721	Chinchilla_lanigera
ENSFDAG00000016913	SRRM3	100	95.062	ENSCSAG00000018140	SRRM3	92	48.432	Chlorocebus_sabaeus
ENSFDAG00000016913	SRRM3	99	97.500	ENSCGRG00001011385	Srrm3	57	89.344	Cricetulus_griseus_chok1gshd
ENSFDAG00000016913	SRRM3	98	94.937	ENSDNOG00000046922	SRRM3	74	91.000	Dasypus_novemcinctus
ENSFDAG00000016913	SRRM3	99	93.750	ENSEASG00005016840	-	65	65.447	Equus_asinus_asinus
ENSFDAG00000016913	SRRM3	99	93.750	ENSECAG00000022142	-	65	65.447	Equus_caballus
ENSFDAG00000016913	SRRM3	99	93.750	ENSFCAG00000044112	SRRM3	73	95.082	Felis_catus
ENSFDAG00000016913	SRRM3	100	98.765	ENSHGLG00000015576	SRRM3	65	98.765	Heterocephalus_glaber_female
ENSFDAG00000016913	SRRM3	100	96.296	ENSSTOG00000014181	SRRM3	65	96.296	Ictidomys_tridecemlineatus
ENSFDAG00000016913	SRRM3	65	96.226	ENSJJAG00000023441	Srrm3	74	91.803	Jaculus_jaculus
ENSFDAG00000016913	SRRM3	99	96.250	ENSMAUG00000017613	Srrm3	65	95.062	Mesocricetus_auratus
ENSFDAG00000016913	SRRM3	100	96.296	ENSMICG00000010668	SRRM3	95	56.055	Microcebus_murinus
ENSFDAG00000016913	SRRM3	99	95.000	ENSMOCG00000002565	Srrm3	57	90.984	Microtus_ochrogaster
ENSFDAG00000016913	SRRM3	100	96.296	MGP_CAROLIEiJ_G0027845	-	72	65.447	Mus_caroli
ENSFDAG00000016913	SRRM3	100	96.296	ENSMUSG00000039860	Srrm3	65	96.296	Mus_musculus
ENSFDAG00000016913	SRRM3	100	97.531	MGP_PahariEiJ_G0024425	Srrm3	65	97.531	Mus_pahari
ENSFDAG00000016913	SRRM3	100	96.296	MGP_SPRETEiJ_G0028844	Srrm3	65	96.296	Mus_spretus
ENSFDAG00000016913	SRRM3	99	96.250	ENSODEG00000015988	SRRM3	95	53.610	Octodon_degus
ENSFDAG00000016913	SRRM3	100	93.827	ENSOGAG00000030805	SRRM3	74	94.262	Otolemur_garnettii
ENSFDAG00000016913	SRRM3	99	82.500	ENSPPRG00000006254	SRRM3	95	56.918	Panthera_pardus
ENSFDAG00000016913	SRRM3	99	97.500	ENSPTRG00000019317	SRRM3	95	52.977	Pan_troglodytes
ENSFDAG00000016913	SRRM3	100	96.296	ENSPANG00000000776	SRRM3	59	50.733	Papio_anubis
ENSFDAG00000016913	SRRM3	100	96.296	ENSPEMG00000012358	-	65	96.296	Peromyscus_maniculatus_bairdii
ENSFDAG00000016913	SRRM3	100	95.062	ENSPCOG00000028464	SRRM3	95	53.882	Propithecus_coquereli
ENSFDAG00000016913	SRRM3	100	93.827	ENSRNOG00000001439	Srrm3	57	91.803	Rattus_norvegicus
ENSFDAG00000016913	SRRM3	100	96.296	ENSRROG00000034980	SRRM3	81	90.984	Rhinopithecus_roxellana