EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000016958 (Gene tree)
Gene ID: 104866411
Gene Symbol: SNAI2
Alias: SLUG|SLUGH|SLUGH1|SNAIL2
Full Name: snail family transcriptional repressor 2
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 3712 bases
Position: chrKN122397.1:370288-373999
Accession: 104866411
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000008792	zf-C2H2	PF00096.26	7.2e-28	1	5
ENSFDAP00000008792	zf-C2H2	PF00096.26	7.2e-28	2	5
ENSFDAP00000008792	zf-C2H2	PF00096.26	7.2e-28	3	5
ENSFDAP00000008792	zf-C2H2	PF00096.26	7.2e-28	4	5
ENSFDAP00000008792	zf-C2H2	PF00096.26	7.2e-28	5	5
ENSFDAP00000008792	zf-met	PF12874.7	1.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000021843	SNAI2-201	2074	XM_010630311	ENSFDAP00000008792	268 (aa)	XP_010628613	A0A091DJW5

Gene Model

Click here to download ENSFDAG00000016958's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000016958's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000016958	SNAI2	53	39.259	ENSFDAG00000015590	ZNF235	66	39.259
ENSFDAG00000016958	SNAI2	56	36.567	ENSFDAG00000020159	ZNF319	82	36.697
ENSFDAG00000016958	SNAI2	63	37.313	ENSFDAG00000008114	ZNF81	53	37.313
ENSFDAG00000016958	SNAI2	54	41.121	ENSFDAG00000015190	-	72	41.121
ENSFDAG00000016958	SNAI2	55	41.481	ENSFDAG00000020138	-	65	41.481
ENSFDAG00000016958	SNAI2	74	40.000	ENSFDAG00000010369	-	79	40.000
ENSFDAG00000016958	SNAI2	50	42.453	ENSFDAG00000006075	-	100	42.453
ENSFDAG00000016958	SNAI2	54	38.095	ENSFDAG00000003974	ZNF574	57	38.095
ENSFDAG00000016958	SNAI2	75	50.000	ENSFDAG00000007103	ZNF236	54	50.000
ENSFDAG00000016958	SNAI2	52	37.594	ENSFDAG00000019296	-	100	37.594
ENSFDAG00000016958	SNAI2	57	40.876	ENSFDAG00000021361	PRDM5	69	42.157
ENSFDAG00000016958	SNAI2	54	44.030	ENSFDAG00000009594	-	74	44.030
ENSFDAG00000016958	SNAI2	50	34.483	ENSFDAG00000016841	GTF3A	78	34.483
ENSFDAG00000016958	SNAI2	50	38.806	ENSFDAG00000008549	ZNF2	58	38.806
ENSFDAG00000016958	SNAI2	62	51.765	ENSFDAG00000008733	SCRT1	77	51.765
ENSFDAG00000016958	SNAI2	72	43.548	ENSFDAG00000005159	-	52	43.548
ENSFDAG00000016958	SNAI2	67	42.169	ENSFDAG00000010005	ZFP64	61	42.169
ENSFDAG00000016958	SNAI2	99	53.069	ENSFDAG00000005851	SNAI1	98	51.079
ENSFDAG00000016958	SNAI2	53	40.000	ENSFDAG00000005609	-	60	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000016958	SNAI2	100	97.761	ENSG00000019549	SNAI2	100	97.761	Homo_sapiens
ENSFDAG00000016958	SNAI2	100	99.254	ENSAMEG00000009606	SNAI2	100	99.254	Ailuropoda_melanoleuca
ENSFDAG00000016958	SNAI2	99	45.928	ENSANAG00000032748	SNAI3	99	45.603	Aotus_nancymaae
ENSFDAG00000016958	SNAI2	100	97.015	ENSANAG00000021163	SNAI2	100	97.015	Aotus_nancymaae
ENSFDAG00000016958	SNAI2	99	45.455	ENSBTAG00000017528	SNAI3	99	45.033	Bos_taurus
ENSFDAG00000016958	SNAI2	100	93.657	ENSBTAG00000013227	SNAI2	100	93.657	Bos_taurus
ENSFDAG00000016958	SNAI2	100	97.761	ENSCJAG00000013499	SNAI2	100	97.761	Callithrix_jacchus
ENSFDAG00000016958	SNAI2	100	98.507	ENSCAFG00000006638	SNAI2	100	98.507	Canis_familiaris
ENSFDAG00000016958	SNAI2	99	47.751	ENSCAFG00000029458	SNAI3	99	46.939	Canis_familiaris
ENSFDAG00000016958	SNAI2	99	48.097	ENSCAFG00020004719	SNAI3	99	47.279	Canis_lupus_dingo
ENSFDAG00000016958	SNAI2	100	98.507	ENSCAFG00020015384	SNAI2	100	98.507	Canis_lupus_dingo
ENSFDAG00000016958	SNAI2	99	46.358	ENSCHIG00000018087	SNAI3	99	45.791	Capra_hircus
ENSFDAG00000016958	SNAI2	100	93.284	ENSCHIG00000024410	SNAI2	100	93.284	Capra_hircus
ENSFDAG00000016958	SNAI2	90	96.680	ENSTSYG00000030892	SNAI2	90	96.680	Carlito_syrichta
ENSFDAG00000016958	SNAI2	53	72.000	ENSTSYG00000025594	SNAI3	52	72.000	Carlito_syrichta
ENSFDAG00000016958	SNAI2	83	98.206	ENSCAPG00000013078	SNAI2	100	98.206	Cavia_aperea
ENSFDAG00000016958	SNAI2	100	97.761	ENSCCAG00000024100	SNAI2	100	97.761	Cebus_capucinus
ENSFDAG00000016958	SNAI2	99	47.231	ENSCATG00000031714	SNAI3	99	47.231	Cercocebus_atys
ENSFDAG00000016958	SNAI2	100	97.761	ENSCATG00000028656	SNAI2	100	97.761	Cercocebus_atys
ENSFDAG00000016958	SNAI2	100	99.254	ENSCLAG00000011797	SNAI2	100	99.254	Chinchilla_lanigera
ENSFDAG00000016958	SNAI2	100	97.761	ENSCSAG00000014787	SNAI2	100	97.761	Chlorocebus_sabaeus
ENSFDAG00000016958	SNAI2	99	52.189	ENSCPBG00000023474	SNAI3	99	52.189	Chrysemys_picta_bellii
ENSFDAG00000016958	SNAI2	100	94.403	ENSCPBG00000020255	SNAI2	100	94.403	Chrysemys_picta_bellii
ENSFDAG00000016958	SNAI2	50	65.672	ENSCSAVG00000009819	-	81	57.962	Ciona_savignyi
ENSFDAG00000016958	SNAI2	100	97.761	ENSCANG00000029656	SNAI2	100	97.761	Colobus_angolensis_palliatus
ENSFDAG00000016958	SNAI2	99	47.735	ENSCGRG00001011389	Snai3	99	47.038	Cricetulus_griseus_chok1gshd
ENSFDAG00000016958	SNAI2	100	97.388	ENSCGRG00001013674	Snai2	100	97.388	Cricetulus_griseus_chok1gshd
ENSFDAG00000016958	SNAI2	99	47.735	ENSCGRG00000014932	Snai3	99	47.038	Cricetulus_griseus_crigri
ENSFDAG00000016958	SNAI2	100	97.388	ENSCGRG00000012119	Snai2	100	97.388	Cricetulus_griseus_crigri
ENSFDAG00000016958	SNAI2	78	35.616	ENSDNOG00000035204	-	100	35.242	Dasypus_novemcinctus
ENSFDAG00000016958	SNAI2	100	95.149	ENSDORG00000029620	Snai2	100	95.149	Dipodomys_ordii
ENSFDAG00000016958	SNAI2	99	48.797	ENSECAG00000012131	SNAI3	99	47.973	Equus_caballus
ENSFDAG00000016958	SNAI2	100	80.970	ENSELUG00000021795	SNAI2	79	79.851	Esox_lucius
ENSFDAG00000016958	SNAI2	99	56.747	ENSELUG00000018742	-	99	56.944	Esox_lucius
ENSFDAG00000016958	SNAI2	99	46.595	ENSFCAG00000043885	SNAI3	99	45.848	Felis_catus
ENSFDAG00000016958	SNAI2	89	63.445	ENSFALG00000012974	-	98	65.546	Ficedula_albicollis
ENSFDAG00000016958	SNAI2	100	94.403	ENSGAGG00000000426	SNAI2	100	94.403	Gopherus_agassizii
ENSFDAG00000016958	SNAI2	99	53.559	ENSGAGG00000023571	SNAI3	99	52.881	Gopherus_agassizii
ENSFDAG00000016958	SNAI2	100	97.761	ENSGGOG00000000959	SNAI2	100	97.761	Gorilla_gorilla
ENSFDAG00000016958	SNAI2	99	48.805	ENSGGOG00000012559	SNAI3	99	45.928	Gorilla_gorilla
ENSFDAG00000016958	SNAI2	100	75.836	ENSHCOG00000019435	SNAI2	100	75.836	Hippocampus_comes
ENSFDAG00000016958	SNAI2	100	70.896	ENSIPUG00000000131	snai2	100	70.522	Ictalurus_punctatus
ENSFDAG00000016958	SNAI2	100	98.881	ENSSTOG00000028743	SNAI2	100	98.881	Ictidomys_tridecemlineatus
ENSFDAG00000016958	SNAI2	99	48.311	ENSJJAG00000019934	Snai3	99	46.959	Jaculus_jaculus
ENSFDAG00000016958	SNAI2	100	86.940	ENSLOCG00000005992	SNAI2	100	86.940	Lepisosteus_oculatus
ENSFDAG00000016958	SNAI2	52	86.429	ENSLOCG00000004887	SNAI3	92	83.444	Lepisosteus_oculatus
ENSFDAG00000016958	SNAI2	99	57.196	ENSLAFG00000005117	SNAI3	99	57.196	Loxodonta_africana
ENSFDAG00000016958	SNAI2	100	97.015	ENSLAFG00000009299	SNAI2	100	97.015	Loxodonta_africana
ENSFDAG00000016958	SNAI2	99	49.505	ENSMFAG00000032064	SNAI3	99	48.515	Macaca_fascicularis
ENSFDAG00000016958	SNAI2	100	97.761	ENSMFAG00000046061	SNAI2	100	97.761	Macaca_fascicularis
ENSFDAG00000016958	SNAI2	99	49.505	ENSMMUG00000008716	SNAI3	99	48.515	Macaca_mulatta
ENSFDAG00000016958	SNAI2	100	97.761	ENSMMUG00000016195	SNAI2	100	97.761	Macaca_mulatta
ENSFDAG00000016958	SNAI2	100	97.761	ENSMNEG00000034216	SNAI2	100	97.761	Macaca_nemestrina
ENSFDAG00000016958	SNAI2	99	49.835	ENSMNEG00000045515	SNAI3	99	48.845	Macaca_nemestrina
ENSFDAG00000016958	SNAI2	100	97.761	ENSMLEG00000034407	SNAI2	100	97.761	Mandrillus_leucophaeus
ENSFDAG00000016958	SNAI2	85	54.430	ENSMLEG00000033191	SNAI3	75	54.430	Mandrillus_leucophaeus
ENSFDAG00000016958	SNAI2	100	97.015	ENSMAUG00000008119	Snai2	100	97.015	Mesocricetus_auratus
ENSFDAG00000016958	SNAI2	100	97.015	ENSMOCG00000006622	Snai2	100	97.015	Microtus_ochrogaster
ENSFDAG00000016958	SNAI2	100	95.522	ENSMODG00000010173	SNAI2	100	95.522	Monodelphis_domestica
ENSFDAG00000016958	SNAI2	100	96.654	MGP_CAROLIEiJ_G0020483	Snai2	100	96.654	Mus_caroli
ENSFDAG00000016958	SNAI2	100	95.911	ENSMUSG00000022676	Snai2	100	95.911	Mus_musculus
ENSFDAG00000016958	SNAI2	100	96.654	MGP_PahariEiJ_G0016188	Snai2	100	96.654	Mus_pahari
ENSFDAG00000016958	SNAI2	100	96.283	MGP_SPRETEiJ_G0021379	Snai2	100	96.283	Mus_spretus
ENSFDAG00000016958	SNAI2	100	99.254	ENSMPUG00000010793	SNAI2	100	99.254	Mustela_putorius_furo
ENSFDAG00000016958	SNAI2	99	49.474	ENSMPUG00000008104	SNAI3	99	45.955	Mustela_putorius_furo
ENSFDAG00000016958	SNAI2	100	97.761	ENSMLUG00000001086	SNAI2	100	97.761	Myotis_lucifugus
ENSFDAG00000016958	SNAI2	99	47.945	ENSNGAG00000023039	Snai3	99	48.264	Nannospalax_galili
ENSFDAG00000016958	SNAI2	100	97.761	ENSNLEG00000013421	SNAI2	100	97.761	Nomascus_leucogenys
ENSFDAG00000016958	SNAI2	99	48.639	ENSNLEG00000000595	SNAI3	99	46.254	Nomascus_leucogenys
ENSFDAG00000016958	SNAI2	97	95.402	ENSMEUG00000009510	SNAI2	100	95.402	Notamacropus_eugenii
ENSFDAG00000016958	SNAI2	100	94.776	ENSOANG00000007267	SNAI2	100	94.776	Ornithorhynchus_anatinus
ENSFDAG00000016958	SNAI2	99	48.432	ENSOGAG00000000419	SNAI3	99	48.639	Otolemur_garnettii
ENSFDAG00000016958	SNAI2	100	93.284	ENSOARG00000013030	SNAI2	100	93.284	Ovis_aries
ENSFDAG00000016958	SNAI2	100	97.761	ENSPPAG00000015662	SNAI2	100	97.761	Pan_paniscus
ENSFDAG00000016958	SNAI2	99	48.464	ENSPPAG00000043301	SNAI3	99	45.603	Pan_paniscus
ENSFDAG00000016958	SNAI2	100	98.507	ENSPPRG00000012562	-	100	98.507	Panthera_pardus
ENSFDAG00000016958	SNAI2	99	46.014	ENSPPRG00000008511	SNAI3	99	47.292	Panthera_pardus
ENSFDAG00000016958	SNAI2	90	98.347	ENSPTIG00000007593	SNAI2	77	98.347	Panthera_tigris_altaica
ENSFDAG00000016958	SNAI2	100	97.761	ENSPTRG00000020235	SNAI2	100	97.761	Pan_troglodytes
ENSFDAG00000016958	SNAI2	99	48.805	ENSPTRG00000008460	SNAI3	99	45.928	Pan_troglodytes
ENSFDAG00000016958	SNAI2	100	97.761	ENSPANG00000017540	SNAI2	100	97.761	Papio_anubis
ENSFDAG00000016958	SNAI2	99	47.557	ENSPANG00000000509	SNAI3	99	47.557	Papio_anubis
ENSFDAG00000016958	SNAI2	100	85.075	ENSPKIG00000002254	SNAI2	100	85.075	Paramormyrops_kingsleyae
ENSFDAG00000016958	SNAI2	99	54.483	ENSPKIG00000007872	SNAI3	99	53.793	Paramormyrops_kingsleyae
ENSFDAG00000016958	SNAI2	86	57.447	ENSPSIG00000004262	SNAI3	56	80.986	Pelodiscus_sinensis
ENSFDAG00000016958	SNAI2	100	94.030	ENSPSIG00000016395	SNAI2	100	94.030	Pelodiscus_sinensis
ENSFDAG00000016958	SNAI2	100	78.731	ENSPMGG00000013179	SNAI2	100	77.239	Periophthalmus_magnuspinnatus
ENSFDAG00000016958	SNAI2	100	97.761	ENSPEMG00000011739	Snai2	100	97.761	Peromyscus_maniculatus_bairdii
ENSFDAG00000016958	SNAI2	100	95.896	ENSPCIG00000025156	SNAI2	100	95.896	Phascolarctos_cinereus
ENSFDAG00000016958	SNAI2	90	79.752	ENSPREG00000008528	SNAI2	86	78.099	Poecilia_reticulata
ENSFDAG00000016958	SNAI2	100	97.761	ENSPPYG00000018578	SNAI2	100	97.761	Pongo_abelii
ENSFDAG00000016958	SNAI2	99	48.515	ENSPPYG00000007643	SNAI3	99	48.675	Pongo_abelii
ENSFDAG00000016958	SNAI2	100	98.507	ENSPCOG00000015656	SNAI2	100	98.507	Propithecus_coquereli
ENSFDAG00000016958	SNAI2	100	97.761	ENSPVAG00000009457	SNAI2	100	97.761	Pteropus_vampyrus
ENSFDAG00000016958	SNAI2	99	49.505	ENSRBIG00000025770	SNAI3	99	48.701	Rhinopithecus_bieti
ENSFDAG00000016958	SNAI2	100	97.761	ENSRBIG00000041133	SNAI2	100	97.761	Rhinopithecus_bieti
ENSFDAG00000016958	SNAI2	100	97.761	ENSRROG00000032273	SNAI2	100	97.761	Rhinopithecus_roxellana
ENSFDAG00000016958	SNAI2	99	48.052	ENSRROG00000032757	SNAI3	99	48.515	Rhinopithecus_roxellana
ENSFDAG00000016958	SNAI2	100	97.761	ENSSBOG00000035774	SNAI2	100	97.761	Saimiri_boliviensis_boliviensis
ENSFDAG00000016958	SNAI2	100	95.896	ENSSHAG00000004205	SNAI2	100	95.896	Sarcophilus_harrisii
ENSFDAG00000016958	SNAI2	99	48.693	ENSSFOG00015016115	snai3	93	50.000	Scleropages_formosus
ENSFDAG00000016958	SNAI2	100	84.074	ENSSFOG00015018025	SNAI2	100	84.074	Scleropages_formosus
ENSFDAG00000016958	SNAI2	100	93.657	ENSSPUG00000005427	-	100	93.657	Sphenodon_punctatus
ENSFDAG00000016958	SNAI2	100	95.149	ENSSSCG00000039568	SNAI2	100	95.149	Sus_scrofa
ENSFDAG00000016958	SNAI2	99	50.173	ENSUAMG00000020030	SNAI3	99	48.525	Ursus_americanus
ENSFDAG00000016958	SNAI2	86	99.130	ENSUAMG00000014942	SNAI2	100	99.130	Ursus_americanus
ENSFDAG00000016958	SNAI2	98	98.859	ENSUMAG00000006525	SNAI2	100	98.859	Ursus_maritimus
ENSFDAG00000016958	SNAI2	100	98.881	ENSVVUG00000017625	SNAI2	100	98.881	Vulpes_vulpes
ENSFDAG00000016958	SNAI2	99	48.110	ENSVVUG00000003233	SNAI3	99	45.806	Vulpes_vulpes
ENSFDAG00000016958	SNAI2	100	89.179	ENSXETG00000024006	snai2	100	89.179	Xenopus_tropicalis