EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000017040 (Gene tree)
Gene ID: 104869619
Gene Symbol: R3HDM4
Alias: C19orf22|MGC16353
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 7150 bases
Position: chrKN122676.1:5925466-5932615
Accession: 104869619
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000008898	R3H	PF01424.22	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000029799	R3HDM4-201	3080	XM_010634963	ENSFDAP00000008898	245 (aa)	XP_010633265	-

Gene Model

Click here to download ENSFDAG00000017040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000017040's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000017040	R3HDM4	100	91.429	ENSG00000198858	R3HDM4	91	91.429	Homo_sapiens
ENSFDAG00000017040	R3HDM4	100	88.571	ENSAMEG00000003001	R3HDM4	100	88.571	Ailuropoda_melanoleuca
ENSFDAG00000017040	R3HDM4	97	56.303	ENSACIG00000004672	r3hdm4	91	56.303	Amphilophus_citrinellus
ENSFDAG00000017040	R3HDM4	96	52.340	ENSATEG00000015913	r3hdm4	91	53.617	Anabas_testudineus
ENSFDAG00000017040	R3HDM4	99	90.574	ENSANAG00000029748	R3HDM4	100	90.574	Aotus_nancymaae
ENSFDAG00000017040	R3HDM4	100	90.204	ENSBTAG00000046406	R3HDM4	91	90.204	Bos_taurus
ENSFDAG00000017040	R3HDM4	99	89.754	ENSCJAG00000020114	R3HDM4	91	89.754	Callithrix_jacchus
ENSFDAG00000017040	R3HDM4	100	88.980	ENSCAFG00000019665	R3HDM4	90	88.980	Canis_familiaris
ENSFDAG00000017040	R3HDM4	100	88.571	ENSCAFG00020016880	R3HDM4	90	88.571	Canis_lupus_dingo
ENSFDAG00000017040	R3HDM4	100	90.612	ENSCHIG00000020110	R3HDM4	94	90.612	Capra_hircus
ENSFDAG00000017040	R3HDM4	99	88.934	ENSCCAG00000019955	R3HDM4	88	88.934	Cebus_capucinus
ENSFDAG00000017040	R3HDM4	100	90.283	ENSCATG00000037269	R3HDM4	91	90.688	Cercocebus_atys
ENSFDAG00000017040	R3HDM4	100	96.735	ENSCLAG00000007094	R3HDM4	100	96.735	Chinchilla_lanigera
ENSFDAG00000017040	R3HDM4	100	91.429	ENSCSAG00000012574	R3HDM4	91	91.429	Chlorocebus_sabaeus
ENSFDAG00000017040	R3HDM4	99	70.082	ENSCPBG00000009805	R3HDM4	92	70.082	Chrysemys_picta_bellii
ENSFDAG00000017040	R3HDM4	100	92.653	ENSCANG00000040439	R3HDM4	86	92.653	Colobus_angolensis_palliatus
ENSFDAG00000017040	R3HDM4	99	86.122	ENSCGRG00001021650	R3hdm4	92	88.163	Cricetulus_griseus_chok1gshd
ENSFDAG00000017040	R3HDM4	99	86.122	ENSCGRG00000013169	R3hdm4	92	88.163	Cricetulus_griseus_crigri
ENSFDAG00000017040	R3HDM4	97	52.941	ENSCSEG00000018211	r3hdm4	91	52.941	Cynoglossus_semilaevis
ENSFDAG00000017040	R3HDM4	97	55.882	ENSCVAG00000017127	r3hdm4	92	55.882	Cyprinodon_variegatus
ENSFDAG00000017040	R3HDM4	99	90.650	ENSDORG00000006605	R3hdm4	100	90.650	Dipodomys_ordii
ENSFDAG00000017040	R3HDM4	100	89.796	ENSEASG00005021556	R3HDM4	89	89.796	Equus_asinus_asinus
ENSFDAG00000017040	R3HDM4	100	89.796	ENSECAG00000000003	R3HDM4	90	89.796	Equus_caballus
ENSFDAG00000017040	R3HDM4	100	90.204	ENSFCAG00000042437	R3HDM4	90	90.204	Felis_catus
ENSFDAG00000017040	R3HDM4	99	67.623	ENSFALG00000013938	R3HDM4	100	67.623	Ficedula_albicollis
ENSFDAG00000017040	R3HDM4	97	56.485	ENSFHEG00000017636	r3hdm4	92	56.485	Fundulus_heteroclitus
ENSFDAG00000017040	R3HDM4	97	51.883	ENSGMOG00000001231	r3hdm4	97	51.883	Gadus_morhua
ENSFDAG00000017040	R3HDM4	99	65.447	ENSGALG00000001998	R3HDM4	92	65.447	Gallus_gallus
ENSFDAG00000017040	R3HDM4	97	56.723	ENSGAFG00000004173	r3hdm4	92	56.723	Gambusia_affinis
ENSFDAG00000017040	R3HDM4	99	68.443	ENSGAGG00000019698	R3HDM4	92	68.443	Gopherus_agassizii
ENSFDAG00000017040	R3HDM4	100	91.429	ENSGGOG00000008040	R3HDM4	100	91.429	Gorilla_gorilla
ENSFDAG00000017040	R3HDM4	97	56.303	ENSHBUG00000014810	r3hdm4	91	56.303	Haplochromis_burtoni
ENSFDAG00000017040	R3HDM4	100	94.286	ENSHGLG00000016194	R3HDM4	91	94.286	Heterocephalus_glaber_female
ENSFDAG00000017040	R3HDM4	96	54.661	ENSHCOG00000008422	r3hdm4	91	54.661	Hippocampus_comes
ENSFDAG00000017040	R3HDM4	97	54.393	ENSIPUG00000006716	r3hdm4	91	54.393	Ictalurus_punctatus
ENSFDAG00000017040	R3HDM4	100	89.796	ENSSTOG00000023015	R3HDM4	100	89.796	Ictidomys_tridecemlineatus
ENSFDAG00000017040	R3HDM4	99	88.571	ENSJJAG00000012475	R3hdm4	92	88.571	Jaculus_jaculus
ENSFDAG00000017040	R3HDM4	97	55.649	ENSKMAG00000005853	r3hdm4	91	55.649	Kryptolebias_marmoratus
ENSFDAG00000017040	R3HDM4	97	55.042	ENSLBEG00000000730	r3hdm4	91	55.042	Labrus_bergylta
ENSFDAG00000017040	R3HDM4	99	60.656	ENSLACG00000016445	R3HDM4	93	60.656	Latimeria_chalumnae
ENSFDAG00000017040	R3HDM4	99	55.738	ENSLOCG00000002423	r3hdm4	93	55.738	Lepisosteus_oculatus
ENSFDAG00000017040	R3HDM4	99	88.066	ENSLAFG00000017796	R3HDM4	93	88.066	Loxodonta_africana
ENSFDAG00000017040	R3HDM4	100	91.429	ENSMFAG00000044131	R3HDM4	91	91.429	Macaca_fascicularis
ENSFDAG00000017040	R3HDM4	91	91.518	ENSMMUG00000009682	R3HDM4	90	91.518	Macaca_mulatta
ENSFDAG00000017040	R3HDM4	100	91.429	ENSMNEG00000044115	R3HDM4	99	91.429	Macaca_nemestrina
ENSFDAG00000017040	R3HDM4	100	89.474	ENSMLEG00000035693	R3HDM4	91	89.879	Mandrillus_leucophaeus
ENSFDAG00000017040	R3HDM4	84	58.738	ENSMAMG00000005652	r3hdm4	82	58.738	Mastacembelus_armatus
ENSFDAG00000017040	R3HDM4	99	84.490	ENSMAUG00000010611	R3hdm4	95	86.531	Mesocricetus_auratus
ENSFDAG00000017040	R3HDM4	100	89.796	ENSMICG00000010124	R3HDM4	90	89.796	Microcebus_murinus
ENSFDAG00000017040	R3HDM4	99	86.066	ENSMOCG00000002646	R3hdm4	92	86.475	Microtus_ochrogaster
ENSFDAG00000017040	R3HDM4	97	54.622	ENSMMOG00000008253	r3hdm4	92	54.622	Mola_mola
ENSFDAG00000017040	R3HDM4	95	66.953	ENSMODG00000005698	R3HDM4	100	66.953	Monodelphis_domestica
ENSFDAG00000017040	R3HDM4	97	54.202	ENSMALG00000018856	r3hdm4	91	54.202	Monopterus_albus
ENSFDAG00000017040	R3HDM4	99	87.654	MGP_CAROLIEiJ_G0015551	R3hdm4	92	88.889	Mus_caroli
ENSFDAG00000017040	R3HDM4	99	86.831	ENSMUSG00000035781	R3hdm4	92	88.066	Mus_musculus
ENSFDAG00000017040	R3HDM4	99	86.831	MGP_PahariEiJ_G0030964	R3hdm4	92	88.066	Mus_pahari
ENSFDAG00000017040	R3HDM4	99	86.831	MGP_SPRETEiJ_G0016369	-	77	88.066	Mus_spretus
ENSFDAG00000017040	R3HDM4	100	87.347	ENSMPUG00000009394	R3HDM4	91	87.347	Mustela_putorius_furo
ENSFDAG00000017040	R3HDM4	97	55.882	ENSNBRG00000004438	r3hdm4	91	55.882	Neolamprologus_brichardi
ENSFDAG00000017040	R3HDM4	93	89.224	ENSNLEG00000001022	R3HDM4	100	89.224	Nomascus_leucogenys
ENSFDAG00000017040	R3HDM4	97	65.966	ENSMEUG00000011020	R3HDM4	99	65.966	Notamacropus_eugenii
ENSFDAG00000017040	R3HDM4	100	95.102	ENSODEG00000011745	R3HDM4	91	95.102	Octodon_degus
ENSFDAG00000017040	R3HDM4	97	56.303	ENSONIG00000012675	r3hdm4	84	56.303	Oreochromis_niloticus
ENSFDAG00000017040	R3HDM4	97	55.462	ENSOMEG00000003005	r3hdm4	91	55.462	Oryzias_melastigma
ENSFDAG00000017040	R3HDM4	99	89.754	ENSOGAG00000025656	R3HDM4	92	89.754	Otolemur_garnettii
ENSFDAG00000017040	R3HDM4	100	90.204	ENSOARG00000009945	R3HDM4	100	90.204	Ovis_aries
ENSFDAG00000017040	R3HDM4	100	91.837	ENSPPAG00000042371	R3HDM4	100	91.837	Pan_paniscus
ENSFDAG00000017040	R3HDM4	100	91.429	ENSPANG00000015203	R3HDM4	91	91.429	Papio_anubis
ENSFDAG00000017040	R3HDM4	94	55.172	ENSPKIG00000007421	r3hdm4	88	55.085	Paramormyrops_kingsleyae
ENSFDAG00000017040	R3HDM4	97	51.681	ENSPMGG00000020467	r3hdm4	91	51.681	Periophthalmus_magnuspinnatus
ENSFDAG00000017040	R3HDM4	99	88.115	ENSPEMG00000008365	Tmem259	100	88.115	Peromyscus_maniculatus_bairdii
ENSFDAG00000017040	R3HDM4	97	55.882	ENSPFOG00000003199	r3hdm4	92	55.882	Poecilia_formosa
ENSFDAG00000017040	R3HDM4	97	55.462	ENSPMEG00000014183	r3hdm4	92	55.462	Poecilia_mexicana
ENSFDAG00000017040	R3HDM4	97	56.303	ENSPREG00000010709	r3hdm4	92	56.303	Poecilia_reticulata
ENSFDAG00000017040	R3HDM4	100	91.020	ENSPPYG00000009297	R3HDM4	91	91.020	Pongo_abelii
ENSFDAG00000017040	R3HDM4	62	87.500	ENSPCAG00000010997	R3HDM4	56	87.500	Procavia_capensis
ENSFDAG00000017040	R3HDM4	100	90.204	ENSPCOG00000016785	R3HDM4	90	90.204	Propithecus_coquereli
ENSFDAG00000017040	R3HDM4	97	56.303	ENSPNYG00000017489	r3hdm4	91	56.303	Pundamilia_nyererei
ENSFDAG00000017040	R3HDM4	99	85.597	ENSRNOG00000011489	R3hdm4	92	86.008	Rattus_norvegicus
ENSFDAG00000017040	R3HDM4	100	92.245	ENSRROG00000028842	R3HDM4	91	92.245	Rhinopithecus_roxellana
ENSFDAG00000017040	R3HDM4	99	86.694	ENSSBOG00000019298	R3HDM4	72	87.903	Saimiri_boliviensis_boliviensis
ENSFDAG00000017040	R3HDM4	60	71.918	ENSSHAG00000003036	-	100	71.918	Sarcophilus_harrisii
ENSFDAG00000017040	R3HDM4	97	54.393	ENSSFOG00015020574	r3hdm4	87	54.393	Scleropages_formosus
ENSFDAG00000017040	R3HDM4	97	55.649	ENSSMAG00000021090	r3hdm4	68	55.649	Scophthalmus_maximus
ENSFDAG00000017040	R3HDM4	97	56.485	ENSSDUG00000008488	r3hdm4	91	56.485	Seriola_dumerili
ENSFDAG00000017040	R3HDM4	97	56.485	ENSSLDG00000025328	r3hdm4	91	56.485	Seriola_lalandi_dorsalis
ENSFDAG00000017040	R3HDM4	99	68.033	ENSSPUG00000005434	R3HDM4	95	68.033	Sphenodon_punctatus
ENSFDAG00000017040	R3HDM4	96	53.165	ENSSPAG00000002562	r3hdm4	90	53.165	Stegastes_partitus
ENSFDAG00000017040	R3HDM4	100	90.612	ENSSSCG00000013419	R3HDM4	90	90.612	Sus_scrofa
ENSFDAG00000017040	R3HDM4	85	64.593	ENSTGUG00000000663	R3HDM4	100	64.593	Taeniopygia_guttata
ENSFDAG00000017040	R3HDM4	100	86.531	ENSTTRG00000001470	R3HDM4	100	86.939	Tursiops_truncatus
ENSFDAG00000017040	R3HDM4	91	89.732	ENSUAMG00000005751	R3HDM4	100	89.732	Ursus_americanus
ENSFDAG00000017040	R3HDM4	100	88.980	ENSVVUG00000022685	R3HDM4	90	88.980	Vulpes_vulpes
ENSFDAG00000017040	R3HDM4	97	44.304	ENSXETG00000033624	R3HDM4	91	44.304	Xenopus_tropicalis
ENSFDAG00000017040	R3HDM4	97	56.067	ENSXCOG00000005127	r3hdm4	92	56.067	Xiphophorus_couchianus
ENSFDAG00000017040	R3HDM4	97	56.303	ENSXMAG00000022875	r3hdm4	92	56.303	Xiphophorus_maculatus