EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000017068 (Gene tree)
Gene ID: 104859086
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 29272 bases
Position: chrKN121850.1:12774975-12804246
Accession: 104859086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000008924	POP1	PF06978.11	5.3e-39	1	2
ENSFDAP00000008924	POP1	PF06978.11	5.3e-39	2	2
ENSFDAP00000008924	POPLD	PF08170.12	1.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000021965	POP1-201	3696	XM_010619572	ENSFDAP00000008924	1021 (aa)	XP_010617874	A0A091DYA5

Gene Model

Click here to download ENSFDAG00000017068's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000017068's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000017068	POP1	100	82.715	ENSG00000104356	POP1	100	89.617	Homo_sapiens
ENSFDAG00000017068	POP1	100	48.208	ENSAPOG00000008198	pop1	100	48.204	Acanthochromis_polyacanthus
ENSFDAG00000017068	POP1	100	77.767	ENSAMEG00000000556	POP1	100	77.767	Ailuropoda_melanoleuca
ENSFDAG00000017068	POP1	90	48.780	ENSACIG00000004169	POP1	100	46.154	Amphilophus_citrinellus
ENSFDAG00000017068	POP1	100	46.975	ENSAOCG00000010991	pop1	100	46.914	Amphiprion_ocellaris
ENSFDAG00000017068	POP1	91	46.646	ENSAPEG00000007607	pop1	96	47.095	Amphiprion_percula
ENSFDAG00000017068	POP1	100	45.685	ENSATEG00000024814	POP1	100	45.763	Anabas_testudineus
ENSFDAG00000017068	POP1	92	60.593	ENSAPLG00000014418	POP1	99	60.381	Anas_platyrhynchos
ENSFDAG00000017068	POP1	99	55.566	ENSACAG00000016083	POP1	100	55.950	Anolis_carolinensis
ENSFDAG00000017068	POP1	88	87.537	ENSANAG00000026360	POP1	99	87.537	Aotus_nancymaae
ENSFDAG00000017068	POP1	100	46.958	ENSACLG00000010951	pop1	100	46.045	Astatotilapia_calliptera
ENSFDAG00000017068	POP1	100	45.714	ENSAMXG00000014483	POP1	100	45.530	Astyanax_mexicanus
ENSFDAG00000017068	POP1	100	77.148	ENSBTAG00000012596	POP1	100	77.148	Bos_taurus
ENSFDAG00000017068	POP1	100	81.055	ENSCJAG00000015567	POP1	100	81.055	Callithrix_jacchus
ENSFDAG00000017068	POP1	100	78.550	ENSCAFG00000000469	POP1	100	78.550	Canis_familiaris
ENSFDAG00000017068	POP1	100	78.906	ENSCAFG00020026765	POP1	100	78.906	Canis_lupus_dingo
ENSFDAG00000017068	POP1	100	77.290	ENSCHIG00000017066	POP1	100	77.290	Capra_hircus
ENSFDAG00000017068	POP1	100	81.445	ENSTSYG00000003097	POP1	100	81.445	Carlito_syrichta
ENSFDAG00000017068	POP1	100	82.296	ENSCAPG00000007251	POP1	100	82.296	Cavia_aperea
ENSFDAG00000017068	POP1	100	85.337	ENSCPOG00000002901	POP1	100	85.337	Cavia_porcellus
ENSFDAG00000017068	POP1	100	80.957	ENSCCAG00000018939	POP1	100	80.957	Cebus_capucinus
ENSFDAG00000017068	POP1	100	82.520	ENSCATG00000040916	POP1	100	82.520	Cercocebus_atys
ENSFDAG00000017068	POP1	100	88.074	ENSCLAG00000007208	POP1	97	88.074	Chinchilla_lanigera
ENSFDAG00000017068	POP1	90	82.538	ENSCSAG00000012340	POP1	99	82.538	Chlorocebus_sabaeus
ENSFDAG00000017068	POP1	95	76.151	ENSCHOG00000011432	POP1	100	76.151	Choloepus_hoffmanni
ENSFDAG00000017068	POP1	100	63.743	ENSCPBG00000006373	POP1	100	63.460	Chrysemys_picta_bellii
ENSFDAG00000017068	POP1	100	82.227	ENSCANG00000001647	POP1	100	82.227	Colobus_angolensis_palliatus
ENSFDAG00000017068	POP1	100	76.614	ENSCGRG00001017308	Pop1	100	76.614	Cricetulus_griseus_chok1gshd
ENSFDAG00000017068	POP1	100	71.331	ENSCGRG00000010824	Pop1	100	71.331	Cricetulus_griseus_crigri
ENSFDAG00000017068	POP1	100	44.528	ENSCSEG00000008737	POP1	100	45.249	Cynoglossus_semilaevis
ENSFDAG00000017068	POP1	100	46.514	ENSCVAG00000022248	pop1	100	45.747	Cyprinodon_variegatus
ENSFDAG00000017068	POP1	100	73.783	ENSDNOG00000019974	POP1	100	73.783	Dasypus_novemcinctus
ENSFDAG00000017068	POP1	100	73.118	ENSDORG00000015384	Pop1	100	73.118	Dipodomys_ordii
ENSFDAG00000017068	POP1	78	33.595	FBgn0026702	l(1)G0045	71	33.538	Drosophila_melanogaster
ENSFDAG00000017068	POP1	89	69.231	ENSETEG00000007839	POP1	88	69.231	Echinops_telfairi
ENSFDAG00000017068	POP1	100	80.664	ENSEASG00005003189	POP1	98	80.664	Equus_asinus_asinus
ENSFDAG00000017068	POP1	100	80.371	ENSECAG00000024236	POP1	100	80.371	Equus_caballus
ENSFDAG00000017068	POP1	67	68.722	ENSEEUG00000003050	-	70	68.722	Erinaceus_europaeus
ENSFDAG00000017068	POP1	100	47.031	ENSELUG00000003526	pop1	100	47.323	Esox_lucius
ENSFDAG00000017068	POP1	100	79.883	ENSFCAG00000002168	POP1	100	79.883	Felis_catus
ENSFDAG00000017068	POP1	100	58.083	ENSFALG00000005711	POP1	100	58.083	Ficedula_albicollis
ENSFDAG00000017068	POP1	100	45.793	ENSFHEG00000019518	pop1	100	46.264	Fundulus_heteroclitus
ENSFDAG00000017068	POP1	93	45.325	ENSGMOG00000000659	POP1	98	45.325	Gadus_morhua
ENSFDAG00000017068	POP1	100	46.827	ENSGAFG00000019770	POP1	100	46.565	Gambusia_affinis
ENSFDAG00000017068	POP1	100	46.044	ENSGACG00000003499	pop1	100	45.949	Gasterosteus_aculeatus
ENSFDAG00000017068	POP1	100	63.188	ENSGAGG00000011737	POP1	98	63.398	Gopherus_agassizii
ENSFDAG00000017068	POP1	100	82.520	ENSGGOG00000003176	POP1	100	82.520	Gorilla_gorilla
ENSFDAG00000017068	POP1	100	47.059	ENSHBUG00000021583	pop1	100	46.869	Haplochromis_burtoni
ENSFDAG00000017068	POP1	100	91.202	ENSHGLG00000006029	POP1	100	91.202	Heterocephalus_glaber_female
ENSFDAG00000017068	POP1	100	91.202	ENSHGLG00100016879	POP1	100	91.202	Heterocephalus_glaber_male
ENSFDAG00000017068	POP1	90	49.465	ENSHCOG00000013888	pop1	96	49.412	Hippocampus_comes
ENSFDAG00000017068	POP1	100	45.164	ENSIPUG00000018336	pop1	100	43.494	Ictalurus_punctatus
ENSFDAG00000017068	POP1	100	82.566	ENSSTOG00000011455	POP1	97	82.566	Ictidomys_tridecemlineatus
ENSFDAG00000017068	POP1	100	76.787	ENSJJAG00000013325	Pop1	100	76.787	Jaculus_jaculus
ENSFDAG00000017068	POP1	100	46.272	ENSKMAG00000001346	POP1	100	46.036	Kryptolebias_marmoratus
ENSFDAG00000017068	POP1	89	47.784	ENSLBEG00000024457	POP1	95	47.396	Labrus_bergylta
ENSFDAG00000017068	POP1	93	55.972	ENSLACG00000012498	POP1	99	55.477	Latimeria_chalumnae
ENSFDAG00000017068	POP1	100	50.916	ENSLOCG00000009817	POP1	100	51.105	Lepisosteus_oculatus
ENSFDAG00000017068	POP1	100	80.000	ENSLAFG00000010770	POP1	100	80.000	Loxodonta_africana
ENSFDAG00000017068	POP1	100	82.617	ENSMFAG00000000347	POP1	100	82.617	Macaca_fascicularis
ENSFDAG00000017068	POP1	100	82.324	ENSMNEG00000036870	POP1	100	82.324	Macaca_nemestrina
ENSFDAG00000017068	POP1	100	82.422	ENSMLEG00000034986	POP1	100	82.422	Mandrillus_leucophaeus
ENSFDAG00000017068	POP1	100	45.829	ENSMAMG00000004040	pop1	100	46.017	Mastacembelus_armatus
ENSFDAG00000017068	POP1	100	46.869	ENSMZEG00005025448	pop1	100	46.045	Maylandia_zebra
ENSFDAG00000017068	POP1	100	56.232	ENSMGAG00000012167	POP1	100	56.250	Meleagris_gallopavo
ENSFDAG00000017068	POP1	100	75.855	ENSMAUG00000017537	Pop1	100	75.367	Mesocricetus_auratus
ENSFDAG00000017068	POP1	100	82.617	ENSMICG00000004361	POP1	100	82.617	Microcebus_murinus
ENSFDAG00000017068	POP1	100	75.514	ENSMOCG00000006356	Pop1	100	76.298	Microtus_ochrogaster
ENSFDAG00000017068	POP1	100	44.121	ENSMMOG00000018242	pop1	100	44.121	Mola_mola
ENSFDAG00000017068	POP1	100	66.892	ENSMODG00000006561	POP1	100	67.471	Monodelphis_domestica
ENSFDAG00000017068	POP1	93	50.683	ENSMALG00000012621	POP1	100	46.402	Monopterus_albus
ENSFDAG00000017068	POP1	100	76.200	MGP_CAROLIEiJ_G0019726	Pop1	100	76.200	Mus_caroli
ENSFDAG00000017068	POP1	100	76.298	ENSMUSG00000022325	Pop1	100	76.298	Mus_musculus
ENSFDAG00000017068	POP1	100	76.983	MGP_PahariEiJ_G0019735	Pop1	100	76.983	Mus_pahari
ENSFDAG00000017068	POP1	100	76.102	MGP_SPRETEiJ_G0020622	Pop1	100	76.102	Mus_spretus
ENSFDAG00000017068	POP1	100	78.794	ENSMPUG00000015250	POP1	100	78.794	Mustela_putorius_furo
ENSFDAG00000017068	POP1	100	74.366	ENSMLUG00000010204	POP1	100	74.366	Myotis_lucifugus
ENSFDAG00000017068	POP1	100	80.547	ENSNGAG00000001582	Pop1	100	80.547	Nannospalax_galili
ENSFDAG00000017068	POP1	89	47.335	ENSNBRG00000002356	pop1	94	47.418	Neolamprologus_brichardi
ENSFDAG00000017068	POP1	100	82.031	ENSNLEG00000002541	POP1	100	82.031	Nomascus_leucogenys
ENSFDAG00000017068	POP1	95	59.507	ENSMEUG00000003118	POP1	99	59.507	Notamacropus_eugenii
ENSFDAG00000017068	POP1	100	76.885	ENSOPRG00000007667	POP1	100	76.885	Ochotona_princeps
ENSFDAG00000017068	POP1	100	84.390	ENSODEG00000003984	POP1	100	84.390	Octodon_degus
ENSFDAG00000017068	POP1	100	47.760	ENSONIG00000016445	pop1	100	47.020	Oreochromis_niloticus
ENSFDAG00000017068	POP1	59	70.732	ENSOANG00000001278	-	94	70.732	Ornithorhynchus_anatinus
ENSFDAG00000017068	POP1	100	79.397	ENSOCUG00000017400	POP1	100	79.397	Oryctolagus_cuniculus
ENSFDAG00000017068	POP1	92	49.269	ENSORLG00000002839	pop1	100	47.358	Oryzias_latipes
ENSFDAG00000017068	POP1	90	48.936	ENSORLG00020022450	POP1	96	48.988	Oryzias_latipes_hni
ENSFDAG00000017068	POP1	100	47.505	ENSORLG00015012746	POP1	100	47.092	Oryzias_latipes_hsok
ENSFDAG00000017068	POP1	100	47.379	ENSOMEG00000006915	pop1	99	47.282	Oryzias_melastigma
ENSFDAG00000017068	POP1	100	79.590	ENSOGAG00000001466	POP1	100	79.590	Otolemur_garnettii
ENSFDAG00000017068	POP1	100	82.520	ENSPPAG00000018410	POP1	100	82.520	Pan_paniscus
ENSFDAG00000017068	POP1	100	79.630	ENSPPRG00000005002	POP1	100	79.630	Panthera_pardus
ENSFDAG00000017068	POP1	100	79.922	ENSPTIG00000016527	POP1	100	79.922	Panthera_tigris_altaica
ENSFDAG00000017068	POP1	100	82.715	ENSPTRG00000020458	POP1	100	82.715	Pan_troglodytes
ENSFDAG00000017068	POP1	100	82.324	ENSPANG00000009704	POP1	100	82.324	Papio_anubis
ENSFDAG00000017068	POP1	100	48.944	ENSPKIG00000016325	POP1	100	48.944	Paramormyrops_kingsleyae
ENSFDAG00000017068	POP1	100	62.293	ENSPSIG00000012343	POP1	100	62.112	Pelodiscus_sinensis
ENSFDAG00000017068	POP1	90	48.934	ENSPMGG00000022253	POP1	95	48.323	Periophthalmus_magnuspinnatus
ENSFDAG00000017068	POP1	99	75.048	ENSPEMG00000023633	Pop1	100	75.048	Peromyscus_maniculatus_bairdii
ENSFDAG00000017068	POP1	90	44.726	ENSPMAG00000003209	POP1	100	44.995	Petromyzon_marinus
ENSFDAG00000017068	POP1	100	66.056	ENSPCIG00000012216	POP1	100	66.345	Phascolarctos_cinereus
ENSFDAG00000017068	POP1	100	46.923	ENSPFOG00000012490	POP1	100	46.731	Poecilia_formosa
ENSFDAG00000017068	POP1	100	46.968	ENSPLAG00000004646	POP1	100	46.776	Poecilia_latipinna
ENSFDAG00000017068	POP1	100	47.308	ENSPMEG00000019592	POP1	100	47.115	Poecilia_mexicana
ENSFDAG00000017068	POP1	100	46.667	ENSPREG00000020951	POP1	100	46.667	Poecilia_reticulata
ENSFDAG00000017068	POP1	100	82.812	ENSPPYG00000018777	POP1	100	82.812	Pongo_abelii
ENSFDAG00000017068	POP1	100	73.386	ENSPCAG00000016662	POP1	100	73.386	Procavia_capensis
ENSFDAG00000017068	POP1	100	83.496	ENSPCOG00000019420	POP1	100	83.496	Propithecus_coquereli
ENSFDAG00000017068	POP1	100	78.927	ENSPVAG00000014468	POP1	100	78.927	Pteropus_vampyrus
ENSFDAG00000017068	POP1	89	47.957	ENSPNYG00000004476	pop1	99	46.239	Pundamilia_nyererei
ENSFDAG00000017068	POP1	100	45.018	ENSPNAG00000000265	pop1	100	42.557	Pygocentrus_nattereri
ENSFDAG00000017068	POP1	100	76.690	ENSRNOG00000005243	Pop1	100	76.690	Rattus_norvegicus
ENSFDAG00000017068	POP1	100	82.324	ENSRBIG00000007996	POP1	100	82.324	Rhinopithecus_bieti
ENSFDAG00000017068	POP1	100	82.422	ENSRROG00000012334	POP1	100	82.422	Rhinopithecus_roxellana
ENSFDAG00000017068	POP1	99	82.115	ENSSBOG00000020830	POP1	100	82.115	Saimiri_boliviensis_boliviensis
ENSFDAG00000017068	POP1	100	66.699	ENSSHAG00000000296	POP1	100	66.699	Sarcophilus_harrisii
ENSFDAG00000017068	POP1	100	48.396	ENSSFOG00015007429	pop1	99	48.155	Scleropages_formosus
ENSFDAG00000017068	POP1	86	51.455	ENSSMAG00000010467	POP1	98	46.591	Scophthalmus_maximus
ENSFDAG00000017068	POP1	100	46.698	ENSSDUG00000007817	POP1	100	46.604	Seriola_dumerili
ENSFDAG00000017068	POP1	100	46.887	ENSSLDG00000012565	POP1	100	46.887	Seriola_lalandi_dorsalis
ENSFDAG00000017068	POP1	100	57.838	ENSSPUG00000003550	-	100	58.212	Sphenodon_punctatus
ENSFDAG00000017068	POP1	90	48.927	ENSSPAG00000014955	pop1	94	48.870	Stegastes_partitus
ENSFDAG00000017068	POP1	100	77.669	ENSSSCG00000006078	POP1	100	77.669	Sus_scrofa
ENSFDAG00000017068	POP1	92	55.660	ENSTGUG00000012011	-	100	55.660	Taeniopygia_guttata
ENSFDAG00000017068	POP1	91	47.992	ENSTRUG00000010856	pop1	94	47.684	Takifugu_rubripes
ENSFDAG00000017068	POP1	92	49.059	ENSTNIG00000013297	pop1	99	48.854	Tetraodon_nigroviridis
ENSFDAG00000017068	POP1	95	77.892	ENSTBEG00000014214	POP1	100	77.892	Tupaia_belangeri
ENSFDAG00000017068	POP1	100	77.832	ENSTTRG00000016071	POP1	100	77.832	Tursiops_truncatus
ENSFDAG00000017068	POP1	99	75.814	ENSUAMG00000017309	POP1	100	75.814	Ursus_americanus
ENSFDAG00000017068	POP1	91	87.045	ENSUMAG00000016952	POP1	100	87.045	Ursus_maritimus
ENSFDAG00000017068	POP1	82	88.686	ENSVPAG00000008278	POP1	82	88.686	Vicugna_pacos
ENSFDAG00000017068	POP1	100	78.906	ENSVVUG00000010994	POP1	100	78.906	Vulpes_vulpes
ENSFDAG00000017068	POP1	100	42.131	ENSXCOG00000017043	POP1	100	41.682	Xiphophorus_couchianus
ENSFDAG00000017068	POP1	100	45.910	ENSXMAG00000002472	POP1	100	45.480	Xiphophorus_maculatus