EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000017216 (Gene tree)
Gene ID: -
Gene Symbol: VARS2
Alias: DKFZP434L1435|G7a|KIAA1885|VARS2L|VARSL
Full Name: valine--tRNA ligase%2C mitochondrial
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 14326 bases
Position: chrKN123415.1:718510-732835
Accession: 104875752
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000009160	tRNA-synt_1g	PF09334.11	4.9e-14	1	1
ENSFDAP00000009160	Anticodon_1	PF08264.13	2.4e-29	1	1
ENSFDAP00000009160	tRNA-synt_1	PF00133.22	3.9e-185	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000022158	VARS2-201	3192	XM_010643470	ENSFDAP00000009160	1063 (aa)	XP_010641772	-

Gene Model

Click here to download ENSFDAG00000017216's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000017216's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000017216	VARS2	79	54.472	ENSFDAG00000011401	VARS	82	54.492

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000017216	VARS2	93	51.610	ENSAPOG00000007396	vars2	99	50.418	Acanthochromis_polyacanthus
ENSFDAG00000017216	VARS2	99	82.703	ENSAMEG00000012997	VARS2	97	82.703	Ailuropoda_melanoleuca
ENSFDAG00000017216	VARS2	98	50.281	ENSACIG00000004344	vars2	99	50.281	Amphilophus_citrinellus
ENSFDAG00000017216	VARS2	98	49.722	ENSAOCG00000000476	vars2	99	50.000	Amphiprion_ocellaris
ENSFDAG00000017216	VARS2	98	49.722	ENSAPEG00000008646	vars2	96	50.000	Amphiprion_percula
ENSFDAG00000017216	VARS2	92	53.023	ENSATEG00000012291	vars2	96	52.505	Anabas_testudineus
ENSFDAG00000017216	VARS2	97	57.400	ENSACAG00000022093	VARS2	97	57.400	Anolis_carolinensis
ENSFDAG00000017216	VARS2	99	84.310	ENSANAG00000038018	VARS2	99	84.310	Aotus_nancymaae
ENSFDAG00000017216	VARS2	98	50.279	ENSACLG00000018673	vars2	99	50.279	Astatotilapia_calliptera
ENSFDAG00000017216	VARS2	95	52.376	ENSAMXG00000017773	vars2	97	53.838	Astyanax_mexicanus
ENSFDAG00000017216	VARS2	99	85.024	ENSBTAG00000010698	VARS2	99	84.877	Bos_taurus
ENSFDAG00000017216	VARS2	99	84.623	ENSCJAG00000019826	VARS2	99	84.623	Callithrix_jacchus
ENSFDAG00000017216	VARS2	99	81.827	ENSCAFG00000000454	VARS2	99	81.827	Canis_familiaris
ENSFDAG00000017216	VARS2	87	82.093	ENSCAFG00020019387	VARS2	95	82.151	Canis_lupus_dingo
ENSFDAG00000017216	VARS2	99	85.038	ENSCHIG00000007847	VARS2	99	85.066	Capra_hircus
ENSFDAG00000017216	VARS2	99	84.811	ENSTSYG00000009904	VARS2	99	84.811	Carlito_syrichta
ENSFDAG00000017216	VARS2	87	88.159	ENSCAPG00000017770	VARS2	99	88.159	Cavia_aperea
ENSFDAG00000017216	VARS2	99	87.453	ENSCPOG00000021834	VARS2	99	87.453	Cavia_porcellus
ENSFDAG00000017216	VARS2	99	84.972	ENSCCAG00000037907	VARS2	99	84.972	Cebus_capucinus
ENSFDAG00000017216	VARS2	99	85.808	ENSCATG00000032554	VARS2	99	85.808	Cercocebus_atys
ENSFDAG00000017216	VARS2	100	87.770	ENSCLAG00000002889	VARS2	100	87.770	Chinchilla_lanigera
ENSFDAG00000017216	VARS2	99	85.714	ENSCSAG00000008327	VARS2	99	85.714	Chlorocebus_sabaeus
ENSFDAG00000017216	VARS2	90	62.076	ENSCPBG00000021502	VARS2	96	62.076	Chrysemys_picta_bellii
ENSFDAG00000017216	VARS2	99	85.808	ENSCANG00000014991	VARS2	99	85.808	Colobus_angolensis_palliatus
ENSFDAG00000017216	VARS2	98	82.375	ENSCGRG00001021535	Vars2	99	82.231	Cricetulus_griseus_chok1gshd
ENSFDAG00000017216	VARS2	98	82.375	ENSCGRG00000014112	Vars2	99	82.231	Cricetulus_griseus_crigri
ENSFDAG00000017216	VARS2	81	57.110	ENSCSEG00000015432	vars2	85	68.750	Cynoglossus_semilaevis
ENSFDAG00000017216	VARS2	63	53.608	ENSCVAG00000017765	vars2	94	53.608	Cyprinodon_variegatus
ENSFDAG00000017216	VARS2	98	52.133	ENSDARG00000056717	vars2	98	52.133	Danio_rerio
ENSFDAG00000017216	VARS2	79	84.816	ENSDORG00000008516	Vars2	94	84.816	Dipodomys_ordii
ENSFDAG00000017216	VARS2	99	73.062	ENSETEG00000014844	VARS2	99	73.062	Echinops_telfairi
ENSFDAG00000017216	VARS2	99	85.876	ENSEASG00005019997	VARS2	97	85.876	Equus_asinus_asinus
ENSFDAG00000017216	VARS2	99	86.817	ENSECAG00000018202	VARS2	99	86.817	Equus_caballus
ENSFDAG00000017216	VARS2	62	78.641	ENSEEUG00000012591	-	63	78.641	Erinaceus_europaeus
ENSFDAG00000017216	VARS2	93	51.688	ENSELUG00000017824	vars2	96	51.124	Esox_lucius
ENSFDAG00000017216	VARS2	99	82.609	ENSFCAG00000010531	VARS2	99	82.609	Felis_catus
ENSFDAG00000017216	VARS2	91	50.256	ENSFHEG00000013932	vars2	94	50.669	Fundulus_heteroclitus
ENSFDAG00000017216	VARS2	88	54.679	ENSGMOG00000018960	vars2	99	54.679	Gadus_morhua
ENSFDAG00000017216	VARS2	81	50.249	ENSGAFG00000004737	vars2	89	50.249	Gambusia_affinis
ENSFDAG00000017216	VARS2	92	53.550	ENSGACG00000001464	vars2	99	53.550	Gasterosteus_aculeatus
ENSFDAG00000017216	VARS2	91	61.336	ENSGAGG00000011652	VARS2	99	61.336	Gopherus_agassizii
ENSFDAG00000017216	VARS2	99	84.868	ENSGGOG00000014587	VARS2	99	84.868	Gorilla_gorilla
ENSFDAG00000017216	VARS2	90	51.368	ENSHBUG00000002448	vars2	95	51.368	Haplochromis_burtoni
ENSFDAG00000017216	VARS2	100	89.087	ENSHGLG00000012886	VARS2	96	89.087	Heterocephalus_glaber_female
ENSFDAG00000017216	VARS2	100	88.899	ENSHGLG00100016535	VARS2	100	88.899	Heterocephalus_glaber_male
ENSFDAG00000017216	VARS2	68	48.853	ENSHCOG00000017907	vars2	94	50.845	Hippocampus_comes
ENSFDAG00000017216	VARS2	89	55.983	ENSIPUG00000015573	Vars2	93	54.734	Ictalurus_punctatus
ENSFDAG00000017216	VARS2	99	85.917	ENSSTOG00000009924	VARS2	99	85.917	Ictidomys_tridecemlineatus
ENSFDAG00000017216	VARS2	99	81.733	ENSJJAG00000011144	Vars2	99	81.733	Jaculus_jaculus
ENSFDAG00000017216	VARS2	93	52.012	ENSKMAG00000001393	vars2	96	51.429	Kryptolebias_marmoratus
ENSFDAG00000017216	VARS2	94	51.304	ENSLBEG00000011949	vars2	97	50.801	Labrus_bergylta
ENSFDAG00000017216	VARS2	52	62.703	ENSLBEG00000005480	-	81	62.613	Labrus_bergylta
ENSFDAG00000017216	VARS2	95	51.834	ENSLACG00000001576	-	99	51.834	Latimeria_chalumnae
ENSFDAG00000017216	VARS2	99	83.160	ENSLAFG00000015183	VARS2	99	83.160	Loxodonta_africana
ENSFDAG00000017216	VARS2	99	85.150	ENSMFAG00000042367	VARS2	99	85.150	Macaca_fascicularis
ENSFDAG00000017216	VARS2	99	85.150	ENSMMUG00000018609	VARS2	99	85.150	Macaca_mulatta
ENSFDAG00000017216	VARS2	99	85.338	ENSMNEG00000043163	VARS2	99	85.338	Macaca_nemestrina
ENSFDAG00000017216	VARS2	99	85.714	ENSMLEG00000041728	VARS2	97	85.714	Mandrillus_leucophaeus
ENSFDAG00000017216	VARS2	95	49.952	ENSMAMG00000020339	vars2	97	49.811	Mastacembelus_armatus
ENSFDAG00000017216	VARS2	98	50.186	ENSMZEG00005017669	vars2	99	50.186	Maylandia_zebra
ENSFDAG00000017216	VARS2	99	82.342	ENSMAUG00000018946	Vars2	99	82.342	Mesocricetus_auratus
ENSFDAG00000017216	VARS2	84	86.114	ENSMICG00000005365	VARS2	100	86.114	Microcebus_murinus
ENSFDAG00000017216	VARS2	94	84.867	ENSMOCG00000014607	Vars2	99	84.867	Microtus_ochrogaster
ENSFDAG00000017216	VARS2	91	51.923	ENSMMOG00000012122	vars2	97	50.622	Mola_mola
ENSFDAG00000017216	VARS2	99	74.105	ENSMODG00000015848	VARS2	99	74.105	Monodelphis_domestica
ENSFDAG00000017216	VARS2	89	53.438	ENSMALG00000009217	vars2	95	53.438	Monopterus_albus
ENSFDAG00000017216	VARS2	99	82.298	MGP_CAROLIEiJ_G0021529	Vars2	99	82.298	Mus_caroli
ENSFDAG00000017216	VARS2	99	82.109	ENSMUSG00000038838	Vars2	99	82.109	Mus_musculus
ENSFDAG00000017216	VARS2	99	82.580	MGP_PahariEiJ_G0020523	Vars2	99	82.580	Mus_pahari
ENSFDAG00000017216	VARS2	99	82.298	MGP_SPRETEiJ_G0022436	Vars2	99	82.298	Mus_spretus
ENSFDAG00000017216	VARS2	99	83.270	ENSMPUG00000011643	VARS2	99	83.365	Mustela_putorius_furo
ENSFDAG00000017216	VARS2	99	80.993	ENSMLUG00000002356	VARS2	96	80.993	Myotis_lucifugus
ENSFDAG00000017216	VARS2	98	76.835	ENSNGAG00000020607	Vars2	99	76.460	Nannospalax_galili
ENSFDAG00000017216	VARS2	68	49.311	ENSNBRG00000001624	vars2	61	51.240	Neolamprologus_brichardi
ENSFDAG00000017216	VARS2	99	81.861	ENSNLEG00000005625	VARS2	97	81.861	Nomascus_leucogenys
ENSFDAG00000017216	VARS2	78	71.547	ENSMEUG00000014475	VARS2	90	71.547	Notamacropus_eugenii
ENSFDAG00000017216	VARS2	89	81.938	ENSOPRG00000000682	VARS2	90	81.938	Ochotona_princeps
ENSFDAG00000017216	VARS2	99	86.106	ENSODEG00000017965	VARS2	99	86.106	Octodon_degus
ENSFDAG00000017216	VARS2	92	38.035	ENSONIG00000004734	vars2	99	37.938	Oreochromis_niloticus
ENSFDAG00000017216	VARS2	75	85.294	ENSOANG00000000398	-	97	85.294	Ornithorhynchus_anatinus
ENSFDAG00000017216	VARS2	99	78.366	ENSOCUG00000021496	VARS2	64	78.406	Oryctolagus_cuniculus
ENSFDAG00000017216	VARS2	92	52.118	ENSORLG00000010632	vars2	96	50.997	Oryzias_latipes
ENSFDAG00000017216	VARS2	92	52.020	ENSORLG00020018584	vars2	95	51.149	Oryzias_latipes_hni
ENSFDAG00000017216	VARS2	92	51.823	ENSORLG00015010408	vars2	95	50.958	Oryzias_latipes_hsok
ENSFDAG00000017216	VARS2	92	52.616	ENSOMEG00000008360	vars2	96	51.567	Oryzias_melastigma
ENSFDAG00000017216	VARS2	99	84.057	ENSOGAG00000006087	VARS2	97	84.057	Otolemur_garnettii
ENSFDAG00000017216	VARS2	99	84.390	ENSOARG00000010844	VARS2	98	84.419	Ovis_aries
ENSFDAG00000017216	VARS2	99	84.962	ENSPPAG00000041141	VARS2	99	84.962	Pan_paniscus
ENSFDAG00000017216	VARS2	99	82.514	ENSPPRG00000006751	VARS2	97	82.514	Panthera_pardus
ENSFDAG00000017216	VARS2	99	82.514	ENSPTIG00000017799	VARS2	98	83.552	Panthera_tigris_altaica
ENSFDAG00000017216	VARS2	99	84.962	ENSPTRG00000034497	VARS2	99	84.962	Pan_troglodytes
ENSFDAG00000017216	VARS2	99	85.620	ENSPANG00000018481	VARS2	100	85.880	Papio_anubis
ENSFDAG00000017216	VARS2	95	54.990	ENSPKIG00000011372	vars2	96	54.686	Paramormyrops_kingsleyae
ENSFDAG00000017216	VARS2	59	67.035	ENSPSIG00000006206	VARS2	92	66.359	Pelodiscus_sinensis
ENSFDAG00000017216	VARS2	96	52.587	ENSPMGG00000000465	vars2	98	52.587	Periophthalmus_magnuspinnatus
ENSFDAG00000017216	VARS2	99	83.381	ENSPEMG00000014691	Vars2	99	83.381	Peromyscus_maniculatus_bairdii
ENSFDAG00000017216	VARS2	99	75.425	ENSPCIG00000015040	VARS2	99	75.425	Phascolarctos_cinereus
ENSFDAG00000017216	VARS2	93	52.063	ENSPFOG00000017616	vars2	95	51.751	Poecilia_formosa
ENSFDAG00000017216	VARS2	93	51.714	ENSPLAG00000019778	vars2	96	51.406	Poecilia_latipinna
ENSFDAG00000017216	VARS2	93	51.812	ENSPMEG00000011123	vars2	95	51.503	Poecilia_mexicana
ENSFDAG00000017216	VARS2	89	47.942	ENSPREG00000014998	vars2	94	46.766	Poecilia_reticulata
ENSFDAG00000017216	VARS2	99	85.283	ENSPPYG00000016424	VARS2	99	85.283	Pongo_abelii
ENSFDAG00000017216	VARS2	84	78.571	ENSPCAG00000006946	VARS2	84	78.571	Procavia_capensis
ENSFDAG00000017216	VARS2	99	84.369	ENSPCOG00000014839	VARS2	97	84.290	Propithecus_coquereli
ENSFDAG00000017216	VARS2	99	82.519	ENSPVAG00000004197	VARS2	99	82.519	Pteropus_vampyrus
ENSFDAG00000017216	VARS2	79	59.140	ENSPNYG00000010314	vars2	96	59.140	Pundamilia_nyererei
ENSFDAG00000017216	VARS2	94	53.764	ENSPNAG00000026793	vars2	97	53.277	Pygocentrus_nattereri
ENSFDAG00000017216	VARS2	99	82.015	ENSRNOG00000000833	Vars2	99	82.015	Rattus_norvegicus
ENSFDAG00000017216	VARS2	99	85.661	ENSRBIG00000032725	VARS2	99	85.661	Rhinopithecus_bieti
ENSFDAG00000017216	VARS2	99	85.567	ENSRROG00000043847	VARS2	99	85.567	Rhinopithecus_roxellana
ENSFDAG00000017216	VARS2	99	83.148	ENSSBOG00000033240	VARS2	97	83.148	Saimiri_boliviensis_boliviensis
ENSFDAG00000017216	VARS2	99	74.197	ENSSHAG00000009307	VARS2	99	74.197	Sarcophilus_harrisii
ENSFDAG00000017216	VARS2	98	52.676	ENSSFOG00015016187	vars2	98	52.676	Scleropages_formosus
ENSFDAG00000017216	VARS2	92	53.266	ENSSMAG00000020842	vars2	94	53.346	Scophthalmus_maximus
ENSFDAG00000017216	VARS2	93	51.562	ENSSDUG00000011598	vars2	98	51.080	Seriola_dumerili
ENSFDAG00000017216	VARS2	90	52.152	ENSSLDG00000015492	vars2	97	50.427	Seriola_lalandi_dorsalis
ENSFDAG00000017216	VARS2	57	85.401	ENSSARG00000003786	-	70	85.401	Sorex_araneus
ENSFDAG00000017216	VARS2	88	58.422	ENSSPUG00000014700	VARS2	94	58.422	Sphenodon_punctatus
ENSFDAG00000017216	VARS2	89	51.197	ENSSPAG00000004654	vars2	95	49.562	Stegastes_partitus
ENSFDAG00000017216	VARS2	99	84.557	ENSSSCG00000001384	VARS2	99	84.864	Sus_scrofa
ENSFDAG00000017216	VARS2	91	53.830	ENSTRUG00000005264	vars2	96	52.376	Takifugu_rubripes
ENSFDAG00000017216	VARS2	96	52.073	ENSTNIG00000005916	vars2	99	51.676	Tetraodon_nigroviridis
ENSFDAG00000017216	VARS2	52	89.552	ENSTBEG00000007976	-	53	90.909	Tupaia_belangeri
ENSFDAG00000017216	VARS2	93	86.996	ENSTTRG00000012243	VARS2	93	86.996	Tursiops_truncatus
ENSFDAG00000017216	VARS2	99	82.247	ENSUAMG00000026124	VARS2	99	84.188	Ursus_americanus
ENSFDAG00000017216	VARS2	99	83.081	ENSUMAG00000019894	VARS2	99	83.081	Ursus_maritimus
ENSFDAG00000017216	VARS2	99	82.059	ENSVVUG00000010754	VARS2	94	82.059	Vulpes_vulpes
ENSFDAG00000017216	VARS2	89	54.725	ENSXETG00000003036	vars2	99	54.725	Xenopus_tropicalis
ENSFDAG00000017216	VARS2	89	53.623	ENSXCOG00000003455	vars2	98	51.250	Xiphophorus_couchianus
ENSFDAG00000017216	VARS2	93	50.925	ENSXMAG00000013523	vars2	99	49.173	Xiphophorus_maculatus