EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000017235 (Gene tree)
Gene ID: 104848366
Gene Symbol: SFSWAP
Alias: SFRS8|SWAP
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 61667 bases
Position: chrKN123762.1:4622917-4684583
Accession: 104848366
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000009167	DRY_EERY	PF09750.9	5.4e-33	1	1
ENSFDAP00000009167	Surp	PF01805.20	1e-26	1	2
ENSFDAP00000009167	Surp	PF01805.20	1e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000022185	SFSWAP-201	6695	XM_010604262	ENSFDAP00000009167	952 (aa)	XP_010602564	UPI00053F81A5

Gene Model

Click here to download ENSFDAG00000017235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000017235's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000017235	SFSWAP	100	88.901	ENSG00000061936	SFSWAP	100	88.901	Homo_sapiens
ENSFDAG00000017235	SFSWAP	73	58.815	ENSAPOG00000005784	sfswap	89	78.571	Acanthochromis_polyacanthus
ENSFDAG00000017235	SFSWAP	100	85.189	ENSAMEG00000013818	SFSWAP	100	84.034	Ailuropoda_melanoleuca
ENSFDAG00000017235	SFSWAP	71	59.486	ENSAOCG00000016469	sfswap	89	68.464	Amphiprion_ocellaris
ENSFDAG00000017235	SFSWAP	71	60.606	ENSAPEG00000004965	sfswap	89	68.464	Amphiprion_percula
ENSFDAG00000017235	SFSWAP	74	59.864	ENSATEG00000021053	sfswap	92	64.179	Anabas_testudineus
ENSFDAG00000017235	SFSWAP	100	76.146	ENSAPLG00000013808	SFSWAP	97	77.312	Anas_platyrhynchos
ENSFDAG00000017235	SFSWAP	93	73.111	ENSACAG00000007220	SFSWAP	100	72.303	Anolis_carolinensis
ENSFDAG00000017235	SFSWAP	100	91.176	ENSANAG00000001518	SFSWAP	100	90.966	Aotus_nancymaae
ENSFDAG00000017235	SFSWAP	73	58.807	ENSACLG00000020159	sfswap	99	51.032	Astatotilapia_calliptera
ENSFDAG00000017235	SFSWAP	100	89.076	ENSBTAG00000000439	SFSWAP	100	87.920	Bos_taurus
ENSFDAG00000017235	SFSWAP	100	90.861	ENSCJAG00000003613	SFSWAP	100	90.651	Callithrix_jacchus
ENSFDAG00000017235	SFSWAP	100	87.710	ENSCAFG00000006625	SFSWAP	100	87.605	Canis_familiaris
ENSFDAG00000017235	SFSWAP	87	80.485	ENSCAFG00020011254	SFSWAP	99	80.488	Canis_lupus_dingo
ENSFDAG00000017235	SFSWAP	100	88.445	ENSCHIG00000008838	SFSWAP	100	87.605	Capra_hircus
ENSFDAG00000017235	SFSWAP	100	90.441	ENSTSYG00000010303	SFSWAP	100	90.651	Carlito_syrichta
ENSFDAG00000017235	SFSWAP	92	93.636	ENSCAPG00000004394	SFSWAP	96	94.545	Cavia_aperea
ENSFDAG00000017235	SFSWAP	100	94.433	ENSCPOG00000005280	SFSWAP	100	95.273	Cavia_porcellus
ENSFDAG00000017235	SFSWAP	100	90.336	ENSCCAG00000037255	SFSWAP	100	90.441	Cebus_capucinus
ENSFDAG00000017235	SFSWAP	100	91.387	ENSCATG00000031094	SFSWAP	100	91.702	Cercocebus_atys
ENSFDAG00000017235	SFSWAP	100	96.008	ENSCLAG00000008380	SFSWAP	100	96.008	Chinchilla_lanigera
ENSFDAG00000017235	SFSWAP	100	91.387	ENSCSAG00000001884	SFSWAP	100	91.702	Chlorocebus_sabaeus
ENSFDAG00000017235	SFSWAP	92	73.923	ENSCHOG00000003578	SFSWAP	100	72.222	Choloepus_hoffmanni
ENSFDAG00000017235	SFSWAP	100	72.128	ENSCPBG00000024757	SFSWAP	98	73.374	Chrysemys_picta_bellii
ENSFDAG00000017235	SFSWAP	100	91.282	ENSCANG00000036501	SFSWAP	100	91.597	Colobus_angolensis_palliatus
ENSFDAG00000017235	SFSWAP	100	90.231	ENSCGRG00001011284	Sfswap	100	90.441	Cricetulus_griseus_chok1gshd
ENSFDAG00000017235	SFSWAP	100	90.231	ENSCGRG00000017417	Sfswap	100	90.441	Cricetulus_griseus_crigri
ENSFDAG00000017235	SFSWAP	53	52.392	ENSCVAG00000001205	-	97	47.117	Cyprinodon_variegatus
ENSFDAG00000017235	SFSWAP	99	54.257	ENSDARG00000005980	sfswap	99	56.238	Danio_rerio
ENSFDAG00000017235	SFSWAP	85	87.113	ENSDNOG00000018742	SFSWAP	100	87.114	Dasypus_novemcinctus
ENSFDAG00000017235	SFSWAP	97	84.039	ENSDORG00000010352	Sfswap	99	84.039	Dipodomys_ordii
ENSFDAG00000017235	SFSWAP	50	47.034	FBgn0003638	su(w[a])	56	55.556	Drosophila_melanogaster
ENSFDAG00000017235	SFSWAP	86	69.697	ENSETEG00000016657	-	91	70.370	Echinops_telfairi
ENSFDAG00000017235	SFSWAP	84	39.032	ENSEBUG00000016748	SFSWAP	99	37.671	Eptatretus_burgeri
ENSFDAG00000017235	SFSWAP	100	89.391	ENSEASG00005016502	SFSWAP	100	88.235	Equus_asinus_asinus
ENSFDAG00000017235	SFSWAP	98	89.151	ENSECAG00000007657	SFSWAP	99	87.970	Equus_caballus
ENSFDAG00000017235	SFSWAP	86	71.290	ENSEEUG00000001713	SFSWAP	99	71.951	Erinaceus_europaeus
ENSFDAG00000017235	SFSWAP	100	53.155	ENSELUG00000010942	sfswap	100	53.212	Esox_lucius
ENSFDAG00000017235	SFSWAP	100	88.130	ENSFCAG00000010778	SFSWAP	100	88.025	Felis_catus
ENSFDAG00000017235	SFSWAP	97	77.014	ENSFALG00000009577	SFSWAP	96	76.584	Ficedula_albicollis
ENSFDAG00000017235	SFSWAP	97	77.219	ENSGALG00000002487	SFSWAP	97	76.981	Gallus_gallus
ENSFDAG00000017235	SFSWAP	75	70.588	ENSGACG00000017647	sfswap	99	54.797	Gasterosteus_aculeatus
ENSFDAG00000017235	SFSWAP	100	72.472	ENSGAGG00000002611	SFSWAP	98	73.577	Gopherus_agassizii
ENSFDAG00000017235	SFSWAP	100	90.576	ENSGGOG00000014877	SFSWAP	100	90.052	Gorilla_gorilla
ENSFDAG00000017235	SFSWAP	100	97.164	ENSHGLG00000019216	SFSWAP	100	97.164	Heterocephalus_glaber_female
ENSFDAG00000017235	SFSWAP	100	96.744	ENSHGLG00100019350	SFSWAP	100	96.744	Heterocephalus_glaber_male
ENSFDAG00000017235	SFSWAP	71	58.464	ENSHCOG00000009475	sfswap	97	52.503	Hippocampus_comes
ENSFDAG00000017235	SFSWAP	98	55.397	ENSIPUG00000010598	sfswap	99	51.662	Ictalurus_punctatus
ENSFDAG00000017235	SFSWAP	100	90.871	ENSSTOG00000000773	SFSWAP	100	90.031	Ictidomys_tridecemlineatus
ENSFDAG00000017235	SFSWAP	100	90.231	ENSJJAG00000006609	Sfswap	100	88.866	Jaculus_jaculus
ENSFDAG00000017235	SFSWAP	75	57.775	ENSKMAG00000013168	sfswap	72	57.645	Kryptolebias_marmoratus
ENSFDAG00000017235	SFSWAP	70	61.054	ENSLBEG00000010239	sfswap	71	60.704	Labrus_bergylta
ENSFDAG00000017235	SFSWAP	100	63.897	ENSLACG00000018678	SFSWAP	96	65.139	Latimeria_chalumnae
ENSFDAG00000017235	SFSWAP	92	84.807	ENSLAFG00000014462	SFSWAP	100	84.127	Loxodonta_africana
ENSFDAG00000017235	SFSWAP	98	90.977	ENSMFAG00000037352	SFSWAP	85	91.300	Macaca_fascicularis
ENSFDAG00000017235	SFSWAP	100	90.441	ENSMMUG00000020343	SFSWAP	100	91.597	Macaca_mulatta
ENSFDAG00000017235	SFSWAP	100	90.441	ENSMNEG00000041002	SFSWAP	100	91.597	Macaca_nemestrina
ENSFDAG00000017235	SFSWAP	100	89.391	ENSMLEG00000035728	SFSWAP	100	89.496	Mandrillus_leucophaeus
ENSFDAG00000017235	SFSWAP	73	58.807	ENSMZEG00005017834	SFSWAP	98	50.449	Maylandia_zebra
ENSFDAG00000017235	SFSWAP	97	67.919	ENSMGAG00000002191	SFSWAP	97	69.028	Meleagris_gallopavo
ENSFDAG00000017235	SFSWAP	100	90.031	ENSMICG00000004465	SFSWAP	100	90.031	Microcebus_murinus
ENSFDAG00000017235	SFSWAP	100	89.496	ENSMOCG00000014390	Sfswap	100	89.706	Microtus_ochrogaster
ENSFDAG00000017235	SFSWAP	99	74.348	ENSMODG00000015581	SFSWAP	99	73.554	Monodelphis_domestica
ENSFDAG00000017235	SFSWAP	71	60.143	ENSMALG00000012603	sfswap	99	48.204	Monopterus_albus
ENSFDAG00000017235	SFSWAP	100	89.391	MGP_CAROLIEiJ_G0027780	Sfswap	94	96.491	Mus_caroli
ENSFDAG00000017235	SFSWAP	100	89.496	ENSMUSG00000029439	Sfswap	94	96.491	Mus_musculus
ENSFDAG00000017235	SFSWAP	100	89.110	MGP_PahariEiJ_G0024360	Sfswap	94	97.368	Mus_pahari
ENSFDAG00000017235	SFSWAP	100	89.286	MGP_SPRETEiJ_G0028779	Sfswap	94	96.491	Mus_spretus
ENSFDAG00000017235	SFSWAP	100	87.395	ENSMPUG00000002218	SFSWAP	100	87.395	Mustela_putorius_furo
ENSFDAG00000017235	SFSWAP	89	80.044	ENSMLUG00000011296	SFSWAP	100	78.936	Myotis_lucifugus
ENSFDAG00000017235	SFSWAP	100	89.286	ENSNGAG00000018167	Sfswap	100	90.966	Nannospalax_galili
ENSFDAG00000017235	SFSWAP	100	89.181	ENSNLEG00000008386	SFSWAP	100	88.130	Nomascus_leucogenys
ENSFDAG00000017235	SFSWAP	71	87.319	ENSMEUG00000009556	-	81	87.319	Notamacropus_eugenii
ENSFDAG00000017235	SFSWAP	100	73.508	ENSOPRG00000006983	-	100	72.461	Ochotona_princeps
ENSFDAG00000017235	SFSWAP	100	93.908	ENSODEG00000008020	SFSWAP	100	94.958	Octodon_degus
ENSFDAG00000017235	SFSWAP	96	52.510	ENSONIG00000003757	sfswap	97	63.772	Oreochromis_niloticus
ENSFDAG00000017235	SFSWAP	51	80.777	ENSOANG00000013861	SFSWAP	100	82.880	Ornithorhynchus_anatinus
ENSFDAG00000017235	SFSWAP	100	87.190	ENSOCUG00000002165	SFSWAP	100	86.777	Oryctolagus_cuniculus
ENSFDAG00000017235	SFSWAP	89	89.777	ENSOGAG00000016724	SFSWAP	99	89.659	Otolemur_garnettii
ENSFDAG00000017235	SFSWAP	100	87.945	ENSOARG00000014314	SFSWAP	100	87.107	Ovis_aries
ENSFDAG00000017235	SFSWAP	100	90.681	ENSPPAG00000036706	SFSWAP	100	90.157	Pan_paniscus
ENSFDAG00000017235	SFSWAP	100	80.000	ENSPPRG00000017318	SFSWAP	100	79.400	Panthera_pardus
ENSFDAG00000017235	SFSWAP	99	76.784	ENSPTIG00000004304	SFSWAP	99	75.719	Panthera_tigris_altaica
ENSFDAG00000017235	SFSWAP	100	90.681	ENSPTRG00000005640	SFSWAP	100	90.157	Pan_troglodytes
ENSFDAG00000017235	SFSWAP	100	91.387	ENSPANG00000019737	SFSWAP	100	91.702	Papio_anubis
ENSFDAG00000017235	SFSWAP	72	62.500	ENSPKIG00000008327	sfswap	100	56.080	Paramormyrops_kingsleyae
ENSFDAG00000017235	SFSWAP	61	60.063	ENSPSIG00000017807	SFSWAP	100	66.094	Pelodiscus_sinensis
ENSFDAG00000017235	SFSWAP	100	89.192	ENSPEMG00000001237	Sfswap	100	89.402	Peromyscus_maniculatus_bairdii
ENSFDAG00000017235	SFSWAP	97	80.238	ENSPCIG00000006062	SFSWAP	99	77.835	Phascolarctos_cinereus
ENSFDAG00000017235	SFSWAP	75	58.856	ENSPLAG00000008513	sfswap	99	53.280	Poecilia_latipinna
ENSFDAG00000017235	SFSWAP	75	58.311	ENSPREG00000006692	sfswap	99	52.789	Poecilia_reticulata
ENSFDAG00000017235	SFSWAP	98	90.181	ENSPPYG00000005129	SFSWAP	100	89.541	Pongo_abelii
ENSFDAG00000017235	SFSWAP	58	87.500	ENSPCAG00000004977	-	65	87.500	Procavia_capensis
ENSFDAG00000017235	SFSWAP	51	91.189	ENSPCOG00000023786	SFSWAP	100	91.492	Propithecus_coquereli
ENSFDAG00000017235	SFSWAP	92	87.002	ENSPVAG00000014918	SFSWAP	92	85.859	Pteropus_vampyrus
ENSFDAG00000017235	SFSWAP	73	58.114	ENSPNYG00000012660	sfswap	88	56.456	Pundamilia_nyererei
ENSFDAG00000017235	SFSWAP	100	86.975	ENSRNOG00000000931	Sfswap	100	87.290	Rattus_norvegicus
ENSFDAG00000017235	SFSWAP	100	84.769	ENSRBIG00000036330	SFSWAP	100	84.769	Rhinopithecus_bieti
ENSFDAG00000017235	SFSWAP	100	90.861	ENSRROG00000032001	SFSWAP	100	91.176	Rhinopithecus_roxellana
ENSFDAG00000017235	SFSWAP	100	90.021	ENSSBOG00000026217	SFSWAP	100	90.126	Saimiri_boliviensis_boliviensis
ENSFDAG00000017235	SFSWAP	92	82.002	ENSSHAG00000014232	SFSWAP	100	82.002	Sarcophilus_harrisii
ENSFDAG00000017235	SFSWAP	96	57.878	ENSSFOG00015000766	sfswap	97	59.688	Scleropages_formosus
ENSFDAG00000017235	SFSWAP	71	59.091	ENSSMAG00000018718	sfswap	97	50.749	Scophthalmus_maximus
ENSFDAG00000017235	SFSWAP	71	60.226	ENSSDUG00000021680	sfswap	67	56.328	Seriola_dumerili
ENSFDAG00000017235	SFSWAP	71	61.898	ENSSLDG00000010835	sfswap	85	56.606	Seriola_lalandi_dorsalis
ENSFDAG00000017235	SFSWAP	79	85.437	ENSSARG00000000424	SFSWAP	85	85.437	Sorex_araneus
ENSFDAG00000017235	SFSWAP	87	73.540	ENSSPUG00000010272	SFSWAP	99	75.300	Sphenodon_punctatus
ENSFDAG00000017235	SFSWAP	71	61.351	ENSSPAG00000014310	sfswap	86	55.899	Stegastes_partitus
ENSFDAG00000017235	SFSWAP	100	88.679	ENSSSCG00000009744	SFSWAP	100	87.317	Sus_scrofa
ENSFDAG00000017235	SFSWAP	97	76.293	ENSTGUG00000004623	SFSWAP	99	76.293	Taeniopygia_guttata
ENSFDAG00000017235	SFSWAP	54	93.750	ENSTBEG00000004983	-	67	93.750	Tupaia_belangeri
ENSFDAG00000017235	SFSWAP	100	79.581	ENSTTRG00000013478	SFSWAP	93	91.627	Tursiops_truncatus
ENSFDAG00000017235	SFSWAP	100	85.714	ENSUAMG00000016807	SFSWAP	100	86.555	Ursus_americanus
ENSFDAG00000017235	SFSWAP	90	81.818	ENSUMAG00000002957	SFSWAP	91	82.994	Ursus_maritimus
ENSFDAG00000017235	SFSWAP	57	92.248	ENSVPAG00000010479	-	74	91.870	Vicugna_pacos
ENSFDAG00000017235	SFSWAP	100	87.815	ENSVVUG00000010753	SFSWAP	100	85.819	Vulpes_vulpes
ENSFDAG00000017235	SFSWAP	97	59.859	ENSXETG00000009350	sfswap	94	65.342	Xenopus_tropicalis