EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000017258 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 717 bases
Position: chrKN122139.1:656911-657627
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000009218	RRM_1	PF00076.22	3.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000022228	-	693	-	ENSFDAP00000009218	230 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000017258's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000017258's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000017258	-	52	86.667	ENSFDAG00000016030	-	100	79.832

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000017258	-	52	86.667	ENSG00000115875	SRSF7	100	78.992	Homo_sapiens
ENSFDAG00000017258	-	57	63.359	ENSACIG00000004885	srsf7a	78	66.116	Amphilophus_citrinellus
ENSFDAG00000017258	-	52	80.000	ENSACIG00000009890	srsf7b	92	79.832	Amphilophus_citrinellus
ENSFDAG00000017258	-	51	62.602	ENSAOCG00000021499	srsf7b	78	63.063	Amphiprion_ocellaris
ENSFDAG00000017258	-	51	62.602	ENSAPEG00000018802	srsf7b	78	63.063	Amphiprion_percula
ENSFDAG00000017258	-	52	85.833	ENSACAG00000006082	SRSF7	51	85.714	Anolis_carolinensis
ENSFDAG00000017258	-	100	66.524	ENSANAG00000019399	SRSF7	87	86.555	Aotus_nancymaae
ENSFDAG00000017258	-	52	80.833	ENSAMXG00000007005	srsf7b	56	80.672	Astyanax_mexicanus
ENSFDAG00000017258	-	52	86.667	ENSBTAG00000014891	SRSF7	87	86.555	Bos_taurus
ENSFDAG00000017258	-	52	86.667	ENSCJAG00000015185	SRSF7	100	78.992	Callithrix_jacchus
ENSFDAG00000017258	-	52	86.667	ENSCAFG00000029620	SRSF7	100	79.412	Canis_familiaris
ENSFDAG00000017258	-	52	66.116	ENSCAFG00020013547	-	69	66.667	Canis_lupus_dingo
ENSFDAG00000017258	-	52	86.667	ENSCAFG00020022807	SRSF7	100	79.412	Canis_lupus_dingo
ENSFDAG00000017258	-	52	86.667	ENSCHIG00000019180	SRSF7	100	79.412	Capra_hircus
ENSFDAG00000017258	-	52	86.667	ENSTSYG00000012273	SRSF7	100	79.574	Carlito_syrichta
ENSFDAG00000017258	-	52	86.667	ENSCPOG00000033318	SRSF7	100	79.832	Cavia_porcellus
ENSFDAG00000017258	-	52	86.667	ENSCATG00000031728	SRSF7	100	78.992	Cercocebus_atys
ENSFDAG00000017258	-	52	86.667	ENSCLAG00000005235	SRSF7	100	79.832	Chinchilla_lanigera
ENSFDAG00000017258	-	52	86.667	ENSCSAG00000012296	SRSF7	50	86.555	Chlorocebus_sabaeus
ENSFDAG00000017258	-	52	79.167	ENSCHOG00000002390	-	100	75.630	Choloepus_hoffmanni
ENSFDAG00000017258	-	52	85.833	ENSCPBG00000018247	-	87	85.714	Chrysemys_picta_bellii
ENSFDAG00000017258	-	52	84.167	ENSCPBG00000018252	-	87	84.034	Chrysemys_picta_bellii
ENSFDAG00000017258	-	50	53.125	ENSCING00000023459	-	54	54.032	Ciona_intestinalis
ENSFDAG00000017258	-	52	86.667	ENSCANG00000040757	SRSF7	100	78.992	Colobus_angolensis_palliatus
ENSFDAG00000017258	-	52	86.667	ENSCGRG00001018245	Srsf7	100	79.412	Cricetulus_griseus_chok1gshd
ENSFDAG00000017258	-	53	66.667	ENSCSEG00000006378	srsf7a	76	70.370	Cynoglossus_semilaevis
ENSFDAG00000017258	-	52	80.000	ENSDARG00000101057	srsf7b	78	79.832	Danio_rerio
ENSFDAG00000017258	-	52	86.667	ENSDNOG00000007821	SRSF7	100	78.992	Dasypus_novemcinctus
ENSFDAG00000017258	-	52	86.667	ENSDORG00000008616	Srsf7	100	79.832	Dipodomys_ordii
ENSFDAG00000017258	-	52	86.667	ENSEASG00005005547	SRSF7	100	79.412	Equus_asinus_asinus
ENSFDAG00000017258	-	52	86.667	ENSECAG00000008664	SRSF7	100	79.412	Equus_caballus
ENSFDAG00000017258	-	52	86.667	ENSEEUG00000014487	SRSF7	50	86.555	Erinaceus_europaeus
ENSFDAG00000017258	-	55	66.667	ENSELUG00000016922	srsf7a	80	68.103	Esox_lucius
ENSFDAG00000017258	-	50	78.070	ENSELUG00000018155	srsf7b	80	77.477	Esox_lucius
ENSFDAG00000017258	-	50	56.780	ENSFCAG00000028644	-	78	56.410	Felis_catus
ENSFDAG00000017258	-	100	86.957	ENSFCAG00000031143	SRSF7	100	86.957	Felis_catus
ENSFDAG00000017258	-	53	78.689	ENSFHEG00000023046	srsf7b	52	78.151	Fundulus_heteroclitus
ENSFDAG00000017258	-	53	69.421	ENSFHEG00000007159	srsf7a	58	71.296	Fundulus_heteroclitus
ENSFDAG00000017258	-	52	83.333	ENSGALG00000033120	SRSF7	87	83.193	Gallus_gallus
ENSFDAG00000017258	-	52	78.333	ENSGAFG00000008856	srsf7b	79	79.091	Gambusia_affinis
ENSFDAG00000017258	-	52	81.667	ENSGAGG00000016294	-	87	81.513	Gopherus_agassizii
ENSFDAG00000017258	-	52	84.167	ENSGAGG00000003553	SRSF7	87	84.034	Gopherus_agassizii
ENSFDAG00000017258	-	52	86.667	ENSGGOG00000014620	SRSF7	100	78.992	Gorilla_gorilla
ENSFDAG00000017258	-	51	65.574	ENSHGLG00000005295	-	87	63.710	Heterocephalus_glaber_female
ENSFDAG00000017258	-	52	86.667	ENSHGLG00000013954	-	100	79.832	Heterocephalus_glaber_female
ENSFDAG00000017258	-	51	65.574	ENSHGLG00100014570	-	87	63.710	Heterocephalus_glaber_male
ENSFDAG00000017258	-	52	86.667	ENSHGLG00100006124	-	100	79.832	Heterocephalus_glaber_male
ENSFDAG00000017258	-	52	82.500	ENSIPUG00000011708	srsf7	68	82.353	Ictalurus_punctatus
ENSFDAG00000017258	-	52	86.667	ENSSTOG00000004389	SRSF7	100	79.832	Ictidomys_tridecemlineatus
ENSFDAG00000017258	-	63	59.864	ENSJJAG00000020230	-	71	65.000	Jaculus_jaculus
ENSFDAG00000017258	-	52	86.667	ENSJJAG00000023079	Srsf7	100	79.832	Jaculus_jaculus
ENSFDAG00000017258	-	52	85.714	ENSLOCG00000015778	srsf7b	50	85.714	Lepisosteus_oculatus
ENSFDAG00000017258	-	52	86.667	ENSLAFG00000005666	SRSF7	100	76.860	Loxodonta_africana
ENSFDAG00000017258	-	52	86.667	ENSMFAG00000001980	SRSF7	100	78.992	Macaca_fascicularis
ENSFDAG00000017258	-	52	86.555	ENSMMUG00000011025	SRSF7	99	74.672	Macaca_mulatta
ENSFDAG00000017258	-	52	86.555	ENSMNEG00000036669	SRSF7	100	78.992	Macaca_nemestrina
ENSFDAG00000017258	-	52	86.667	ENSMLEG00000038852	SRSF7	100	78.992	Mandrillus_leucophaeus
ENSFDAG00000017258	-	52	81.667	ENSMAMG00000017138	srsf7b	52	81.513	Mastacembelus_armatus
ENSFDAG00000017258	-	69	45.963	ENSMAUG00000011430	-	61	52.174	Mesocricetus_auratus
ENSFDAG00000017258	-	52	86.667	ENSMAUG00000017430	Srsf7	100	79.412	Mesocricetus_auratus
ENSFDAG00000017258	-	51	87.179	ENSMICG00000005046	SRSF7	100	79.747	Microcebus_murinus
ENSFDAG00000017258	-	55	81.890	ENSMOCG00000022763	-	51	84.034	Microtus_ochrogaster
ENSFDAG00000017258	-	52	60.000	ENSMOCG00000012617	-	100	70.168	Microtus_ochrogaster
ENSFDAG00000017258	-	52	85.833	ENSMODG00000008669	-	100	72.996	Monodelphis_domestica
ENSFDAG00000017258	-	52	84.874	ENSMODG00000023693	-	51	84.874	Monodelphis_domestica
ENSFDAG00000017258	-	52	86.667	MGP_CAROLIEiJ_G0021902	Srsf7	100	78.992	Mus_caroli
ENSFDAG00000017258	-	52	86.667	ENSMUSG00000024097	Srsf7	100	78.992	Mus_musculus
ENSFDAG00000017258	-	52	85.833	MGP_PahariEiJ_G0020891	Srsf7	100	78.571	Mus_pahari
ENSFDAG00000017258	-	52	86.667	MGP_SPRETEiJ_G0022817	Srsf7	100	78.992	Mus_spretus
ENSFDAG00000017258	-	52	85.833	ENSMLUG00000009536	SRSF7	100	78.571	Myotis_lucifugus
ENSFDAG00000017258	-	52	79.167	ENSMLUG00000015692	-	53	78.992	Myotis_lucifugus
ENSFDAG00000017258	-	52	86.667	ENSNGAG00000014431	Srsf7	100	79.832	Nannospalax_galili
ENSFDAG00000017258	-	57	63.359	ENSNBRG00000006601	srsf7a	78	66.116	Neolamprologus_brichardi
ENSFDAG00000017258	-	52	86.667	ENSNLEG00000016349	SRSF7	100	78.992	Nomascus_leucogenys
ENSFDAG00000017258	-	52	85.833	ENSMEUG00000016459	-	50	85.714	Notamacropus_eugenii
ENSFDAG00000017258	-	100	86.957	ENSOPRG00000010234	SRSF7	100	86.957	Ochotona_princeps
ENSFDAG00000017258	-	52	86.667	ENSODEG00000010029	-	100	79.832	Octodon_degus
ENSFDAG00000017258	-	52	86.667	ENSOCUG00000004087	SRSF7	100	79.832	Oryctolagus_cuniculus
ENSFDAG00000017258	-	52	86.667	ENSOGAG00000010169	SRSF7	100	76.860	Otolemur_garnettii
ENSFDAG00000017258	-	56	85.938	ENSOARG00000008771	SRSF7	100	75.934	Ovis_aries
ENSFDAG00000017258	-	52	86.555	ENSPPAG00000017907	SRSF7	100	78.992	Pan_paniscus
ENSFDAG00000017258	-	100	86.957	ENSPPRG00000003682	SRSF7	100	86.957	Panthera_pardus
ENSFDAG00000017258	-	100	86.957	ENSPTIG00000006350	SRSF7	100	86.957	Panthera_tigris_altaica
ENSFDAG00000017258	-	52	86.555	ENSPTRG00000011851	SRSF7	100	78.992	Pan_troglodytes
ENSFDAG00000017258	-	52	86.555	ENSPANG00000018079	SRSF7	100	78.992	Papio_anubis
ENSFDAG00000017258	-	64	77.703	ENSPKIG00000017425	srsf7b	68	84.034	Paramormyrops_kingsleyae
ENSFDAG00000017258	-	52	84.167	ENSPKIG00000022669	SRSF7	80	84.034	Paramormyrops_kingsleyae
ENSFDAG00000017258	-	52	64.754	ENSPMGG00000021890	srsf7a	77	68.519	Periophthalmus_magnuspinnatus
ENSFDAG00000017258	-	52	86.667	ENSPEMG00000015449	Srsf7	100	79.412	Peromyscus_maniculatus_bairdii
ENSFDAG00000017258	-	50	67.241	ENSPMAG00000004472	srsf7a	53	69.524	Petromyzon_marinus
ENSFDAG00000017258	-	52	85.833	ENSPCIG00000020694	-	100	72.996	Phascolarctos_cinereus
ENSFDAG00000017258	-	52	85.000	ENSPCIG00000020726	-	88	84.874	Phascolarctos_cinereus
ENSFDAG00000017258	-	53	78.689	ENSPFOG00000008820	srsf7b	52	78.151	Poecilia_formosa
ENSFDAG00000017258	-	53	78.689	ENSPLAG00000023806	srsf7b	52	78.151	Poecilia_latipinna
ENSFDAG00000017258	-	51	69.492	ENSPREG00000020685	srsf7a	83	71.296	Poecilia_reticulata
ENSFDAG00000017258	-	53	78.689	ENSPREG00000006149	srsf7b	54	78.151	Poecilia_reticulata
ENSFDAG00000017258	-	52	86.555	ENSPPYG00000012480	SRSF7	100	78.992	Pongo_abelii
ENSFDAG00000017258	-	100	82.174	ENSPCAG00000011348	SRSF7	100	76.087	Procavia_capensis
ENSFDAG00000017258	-	52	67.500	ENSPCOG00000025051	-	100	70.168	Propithecus_coquereli
ENSFDAG00000017258	-	53	74.590	ENSPCOG00000023721	-	91	76.496	Propithecus_coquereli
ENSFDAG00000017258	-	52	86.555	ENSPCOG00000019422	-	55	86.555	Propithecus_coquereli
ENSFDAG00000017258	-	99	86.784	ENSPVAG00000012076	SRSF7	99	86.463	Pteropus_vampyrus
ENSFDAG00000017258	-	52	82.500	ENSPNAG00000012546	srsf7b	50	82.353	Pygocentrus_nattereri
ENSFDAG00000017258	-	53	77.049	ENSRNOG00000008398	AABR07055789.1	72	77.311	Rattus_norvegicus
ENSFDAG00000017258	-	52	86.667	ENSRNOG00000027360	Srsf7	100	78.992	Rattus_norvegicus
ENSFDAG00000017258	-	50	85.217	ENSRBIG00000024695	SRSF7	100	74.561	Rhinopithecus_bieti
ENSFDAG00000017258	-	52	86.667	ENSRROG00000005080	SRSF7	100	78.992	Rhinopithecus_roxellana
ENSFDAG00000017258	-	52	86.667	ENSSBOG00000025074	SRSF7	100	78.992	Saimiri_boliviensis_boliviensis
ENSFDAG00000017258	-	52	84.874	ENSSHAG00000004597	-	51	84.874	Sarcophilus_harrisii
ENSFDAG00000017258	-	52	83.333	ENSSFOG00015007348	SRSF7	50	83.193	Scleropages_formosus
ENSFDAG00000017258	-	98	58.667	ENSSDUG00000021338	srsf7b	83	78.992	Seriola_dumerili
ENSFDAG00000017258	-	53	80.488	ENSSLDG00000021463	srsf7b	67	80.672	Seriola_lalandi_dorsalis
ENSFDAG00000017258	-	53	81.148	ENSSPAG00000017204	srsf7b	84	80.672	Stegastes_partitus
ENSFDAG00000017258	-	51	68.908	ENSSPAG00000022192	srsf7a	85	69.444	Stegastes_partitus
ENSFDAG00000017258	-	52	86.667	ENSSSCG00000008484	SRSF7	100	79.412	Sus_scrofa
ENSFDAG00000017258	-	52	85.000	ENSTGUG00000002080	-	50	84.874	Taeniopygia_guttata
ENSFDAG00000017258	-	96	85.000	ENSTTRG00000014324	SRSF7	100	85.000	Tursiops_truncatus
ENSFDAG00000017258	-	52	86.667	ENSUAMG00000025051	-	87	86.555	Ursus_americanus
ENSFDAG00000017258	-	52	86.667	ENSUMAG00000013534	SRSF7	100	79.412	Ursus_maritimus
ENSFDAG00000017258	-	57	66.412	ENSUMAG00000023107	-	60	77.586	Ursus_maritimus
ENSFDAG00000017258	-	52	86.667	ENSVVUG00000018767	-	87	86.555	Vulpes_vulpes
ENSFDAG00000017258	-	61	60.690	ENSVVUG00000006092	-	69	69.444	Vulpes_vulpes
ENSFDAG00000017258	-	52	83.333	ENSXETG00000025300	srsf7	51	84.034	Xenopus_tropicalis
ENSFDAG00000017258	-	54	77.600	ENSXCOG00000010843	srsf7b	81	78.151	Xiphophorus_couchianus
ENSFDAG00000017258	-	53	68.595	ENSXCOG00000009381	srsf7a	83	70.370	Xiphophorus_couchianus