EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000017311 (Gene tree)
Gene ID: 104873431
Gene Symbol: PRDM10
Alias: KIAA1231|MGC131802|PFM7
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 56557 bases
Position: chrKN123169.1:1031944-1088500
Accession: 104873431
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000009268	zf-C2H2	PF00096.26	3.3e-33	1	5
ENSFDAP00000009268	zf-C2H2	PF00096.26	3.3e-33	2	5
ENSFDAP00000009268	zf-C2H2	PF00096.26	3.3e-33	3	5
ENSFDAP00000009268	zf-C2H2	PF00096.26	3.3e-33	4	5
ENSFDAP00000009268	zf-C2H2	PF00096.26	3.3e-33	5	5
ENSFDAP00000009249	zf-C2H2	PF00096.26	2.8e-27	1	4
ENSFDAP00000009249	zf-C2H2	PF00096.26	2.8e-27	2	4
ENSFDAP00000009249	zf-C2H2	PF00096.26	2.8e-27	3	4
ENSFDAP00000009249	zf-C2H2	PF00096.26	2.8e-27	4	4
ENSFDAP00000009249	zf-met	PF12874.7	3.4e-09	1	2
ENSFDAP00000009249	zf-met	PF12874.7	3.4e-09	2	2
ENSFDAP00000009268	zf-met	PF12874.7	5.1e-06	1	2
ENSFDAP00000009268	zf-met	PF12874.7	5.1e-06	2	2
ENSFDAP00000009268	zf-C2H2_jaz	PF12171.8	5.6e-17	1	1
ENSFDAP00000009249	zf-C2H2_jaz	PF12171.8	1.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000022260	PRDM10-202	951	-	ENSFDAP00000009260	317 (aa)	-	-
ENSFDAT00000022277	PRDM10-203	7092	XM_010640101	ENSFDAP00000009268	1174 (aa)	XP_010638403	UPI00053FE956
ENSFDAT00000022259	PRDM10-201	3360	-	ENSFDAP00000009249	1119 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000017311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000017311's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000017311	PRDM10	53	36.111	ENSFDAG00000009594	-	74	36.111
ENSFDAG00000017311	PRDM10	50	31.892	ENSFDAG00000021361	PRDM5	98	36.264

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000017311	PRDM10	100	91.794	ENSG00000170325	PRDM10	100	93.799	Homo_sapiens
ENSFDAG00000017311	PRDM10	97	94.737	ENSAMEG00000002425	PRDM10	100	87.418	Ailuropoda_melanoleuca
ENSFDAG00000017311	PRDM10	100	81.818	ENSAPLG00000004858	PRDM10	100	81.902	Anas_platyrhynchos
ENSFDAG00000017311	PRDM10	97	93.671	ENSANAG00000022064	PRDM10	100	77.468	Aotus_nancymaae
ENSFDAG00000017311	PRDM10	97	92.405	ENSBTAG00000019001	PRDM10	100	89.627	Bos_taurus
ENSFDAG00000017311	PRDM10	100	91.540	ENSCJAG00000009235	PRDM10	100	91.709	Callithrix_jacchus
ENSFDAG00000017311	PRDM10	97	94.872	ENSCAFG00000010164	PRDM10	100	90.545	Canis_familiaris
ENSFDAG00000017311	PRDM10	97	93.750	ENSCAFG00020010152	PRDM10	96	97.333	Canis_lupus_dingo
ENSFDAG00000017311	PRDM10	100	89.594	ENSCHIG00000026530	PRDM10	100	89.340	Capra_hircus
ENSFDAG00000017311	PRDM10	100	92.555	ENSTSYG00000000544	PRDM10	100	92.809	Carlito_syrichta
ENSFDAG00000017311	PRDM10	100	85.762	ENSCAPG00000017296	PRDM10	100	86.436	Cavia_aperea
ENSFDAG00000017311	PRDM10	99	86.625	ENSCPOG00000000389	PRDM10	98	86.625	Cavia_porcellus
ENSFDAG00000017311	PRDM10	100	91.624	ENSCCAG00000024567	PRDM10	100	91.878	Cebus_capucinus
ENSFDAG00000017311	PRDM10	100	91.963	ENSCATG00000040031	PRDM10	100	92.217	Cercocebus_atys
ENSFDAG00000017311	PRDM10	100	95.741	ENSCLAG00000014605	PRDM10	100	95.741	Chinchilla_lanigera
ENSFDAG00000017311	PRDM10	100	92.047	ENSCSAG00000002202	PRDM10	100	92.301	Chlorocebus_sabaeus
ENSFDAG00000017311	PRDM10	97	85.526	ENSCPBG00000026880	PRDM10	96	82.891	Chrysemys_picta_bellii
ENSFDAG00000017311	PRDM10	100	91.794	ENSCANG00000032669	PRDM10	100	92.047	Colobus_angolensis_palliatus
ENSFDAG00000017311	PRDM10	100	91.652	ENSCGRG00001021647	Prdm10	98	96.154	Cricetulus_griseus_chok1gshd
ENSFDAG00000017311	PRDM10	100	91.652	ENSCGRG00000006562	Prdm10	98	96.154	Cricetulus_griseus_crigri
ENSFDAG00000017311	PRDM10	80	92.017	ENSDNOG00000001366	PRDM10	95	92.017	Dasypus_novemcinctus
ENSFDAG00000017311	PRDM10	100	91.482	ENSDORG00000014292	Prdm10	100	91.567	Dipodomys_ordii
ENSFDAG00000017311	PRDM10	96	98.529	ENSEASG00005022914	PRDM10	100	91.201	Equus_asinus_asinus
ENSFDAG00000017311	PRDM10	96	98.529	ENSECAG00000011499	PRDM10	98	94.872	Equus_caballus
ENSFDAG00000017311	PRDM10	98	92.771	ENSFCAG00000004111	PRDM10	96	90.431	Felis_catus
ENSFDAG00000017311	PRDM10	97	82.840	ENSFALG00000004873	PRDM10	100	79.038	Ficedula_albicollis
ENSFDAG00000017311	PRDM10	97	83.186	ENSGALG00000033660	PRDM10	99	82.327	Gallus_gallus
ENSFDAG00000017311	PRDM10	99	64.435	ENSGACG00000012293	prdm10	99	67.949	Gasterosteus_aculeatus
ENSFDAG00000017311	PRDM10	100	80.469	ENSGAGG00000012523	PRDM10	99	80.469	Gopherus_agassizii
ENSFDAG00000017311	PRDM10	100	92.217	ENSGGOG00000015359	PRDM10	100	92.470	Gorilla_gorilla
ENSFDAG00000017311	PRDM10	100	97.956	ENSHGLG00000001106	PRDM10	100	97.956	Heterocephalus_glaber_female
ENSFDAG00000017311	PRDM10	100	97.274	ENSHGLG00100002350	PRDM10	100	97.274	Heterocephalus_glaber_male
ENSFDAG00000017311	PRDM10	97	96.203	ENSSTOG00000002015	PRDM10	100	92.893	Ictidomys_tridecemlineatus
ENSFDAG00000017311	PRDM10	87	95.000	ENSJJAG00000021493	Prdm10	90	92.149	Jaculus_jaculus
ENSFDAG00000017311	PRDM10	97	93.671	ENSLAFG00000031867	PRDM10	100	89.123	Loxodonta_africana
ENSFDAG00000017311	PRDM10	100	92.047	ENSMFAG00000031008	PRDM10	100	92.301	Macaca_fascicularis
ENSFDAG00000017311	PRDM10	100	92.047	ENSMMUG00000017555	PRDM10	100	92.301	Macaca_mulatta
ENSFDAG00000017311	PRDM10	100	91.963	ENSMNEG00000036493	PRDM10	100	92.217	Macaca_nemestrina
ENSFDAG00000017311	PRDM10	92	100.000	ENSMLEG00000042028	PRDM10	91	100.000	Mandrillus_leucophaeus
ENSFDAG00000017311	PRDM10	97	82.895	ENSMGAG00000001112	PRDM10	100	79.184	Meleagris_gallopavo
ENSFDAG00000017311	PRDM10	100	91.963	ENSMICG00000013888	PRDM10	100	92.217	Microcebus_murinus
ENSFDAG00000017311	PRDM10	100	89.833	ENSMOCG00000021853	Prdm10	99	93.506	Microtus_ochrogaster
ENSFDAG00000017311	PRDM10	81	83.023	ENSMODG00000004979	PRDM10	99	85.210	Monodelphis_domestica
ENSFDAG00000017311	PRDM10	100	90.034	ENSMUSG00000042496	Prdm10	96	96.104	Mus_musculus
ENSFDAG00000017311	PRDM10	100	91.426	MGP_SPRETEiJ_G0033061	-	96	96.104	Mus_spretus
ENSFDAG00000017311	PRDM10	97	94.937	ENSMPUG00000008711	PRDM10	99	90.609	Mustela_putorius_furo
ENSFDAG00000017311	PRDM10	97	92.405	ENSMLUG00000013051	PRDM10	100	89.292	Myotis_lucifugus
ENSFDAG00000017311	PRDM10	100	91.993	ENSNGAG00000000580	Prdm10	100	92.078	Nannospalax_galili
ENSFDAG00000017311	PRDM10	100	91.878	ENSNLEG00000007488	PRDM10	100	92.132	Nomascus_leucogenys
ENSFDAG00000017311	PRDM10	100	90.735	ENSODEG00000005309	PRDM10	100	90.985	Octodon_degus
ENSFDAG00000017311	PRDM10	100	77.352	ENSOANG00000000577	-	100	76.520	Ornithorhynchus_anatinus
ENSFDAG00000017311	PRDM10	100	89.509	ENSOCUG00000003736	PRDM10	100	89.763	Oryctolagus_cuniculus
ENSFDAG00000017311	PRDM10	100	90.388	ENSOGAG00000010723	PRDM10	100	90.388	Otolemur_garnettii
ENSFDAG00000017311	PRDM10	100	89.509	ENSOARG00000014507	PRDM10	100	89.255	Ovis_aries
ENSFDAG00000017311	PRDM10	100	92.047	ENSPPAG00000042881	PRDM10	100	92.301	Pan_paniscus
ENSFDAG00000017311	PRDM10	97	93.671	ENSPPRG00000007002	PRDM10	100	90.102	Panthera_pardus
ENSFDAG00000017311	PRDM10	97	93.671	ENSPTIG00000013331	PRDM10	100	90.017	Panthera_tigris_altaica
ENSFDAG00000017311	PRDM10	100	92.047	ENSPTRG00000004477	PRDM10	100	92.301	Pan_troglodytes
ENSFDAG00000017311	PRDM10	100	91.963	ENSPANG00000017470	PRDM10	100	92.217	Papio_anubis
ENSFDAG00000017311	PRDM10	100	90.863	ENSPEMG00000014985	Prdm10	100	90.780	Peromyscus_maniculatus_bairdii
ENSFDAG00000017311	PRDM10	100	92.047	ENSPPYG00000004061	PRDM10	100	92.301	Pongo_abelii
ENSFDAG00000017311	PRDM10	89	96.364	ENSPCAG00000014514	PRDM10	92	96.364	Procavia_capensis
ENSFDAG00000017311	PRDM10	97	94.937	ENSPCOG00000023406	PRDM10	100	78.481	Propithecus_coquereli
ENSFDAG00000017311	PRDM10	100	90.725	ENSPVAG00000012764	PRDM10	100	90.725	Pteropus_vampyrus
ENSFDAG00000017311	PRDM10	100	91.908	ENSRNOG00000007853	Prdm10	100	92.078	Rattus_norvegicus
ENSFDAG00000017311	PRDM10	100	91.963	ENSRBIG00000030924	PRDM10	100	92.217	Rhinopithecus_bieti
ENSFDAG00000017311	PRDM10	100	91.963	ENSRROG00000034334	PRDM10	100	92.217	Rhinopithecus_roxellana
ENSFDAG00000017311	PRDM10	100	91.624	ENSSBOG00000008773	PRDM10	100	91.878	Saimiri_boliviensis_boliviensis
ENSFDAG00000017311	PRDM10	97	88.608	ENSSHAG00000004503	PRDM10	99	84.609	Sarcophilus_harrisii
ENSFDAG00000017311	PRDM10	68	100.000	ENSSARG00000013953	-	68	100.000	Sorex_araneus
ENSFDAG00000017311	PRDM10	100	79.661	ENSSPUG00000001178	PRDM10	97	81.902	Sphenodon_punctatus
ENSFDAG00000017311	PRDM10	100	90.948	ENSSSCG00000015243	PRDM10	100	93.880	Sus_scrofa
ENSFDAG00000017311	PRDM10	100	80.940	ENSTGUG00000000530	PRDM10	100	81.024	Taeniopygia_guttata
ENSFDAG00000017311	PRDM10	86	98.913	ENSTBEG00000007221	PRDM10	94	89.912	Tupaia_belangeri
ENSFDAG00000017311	PRDM10	100	88.533	ENSTTRG00000009189	PRDM10	100	88.280	Tursiops_truncatus
ENSFDAG00000017311	PRDM10	91	90.672	ENSUAMG00000018832	PRDM10	92	94.805	Ursus_americanus
ENSFDAG00000017311	PRDM10	100	88.861	ENSUMAG00000003167	PRDM10	97	93.506	Ursus_maritimus
ENSFDAG00000017311	PRDM10	97	94.937	ENSVVUG00000019878	PRDM10	100	90.271	Vulpes_vulpes
ENSFDAG00000017311	PRDM10	96	71.667	ENSXETG00000032173	PRDM10	100	66.069	Xenopus_tropicalis