EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000017373 (Gene tree)
Gene ID: 104862252
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 24999 bases
Position: chrKN122104.1:3658099-3683097
Accession: 104862252
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000009345	MMR_HSR1	PF01926.23	1.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000022339	LSG1-201	4164	XM_010624062	ENSFDAP00000009345	642 (aa)	XP_010622364	UPI00053FBB63

Gene Model

Click here to download ENSFDAG00000017373's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000017373's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000017373	LSG1	66	30.635	ENSFDAG00000000584	GNL1	59	40.571

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000017373	LSG1	100	78.756	ENSG00000041802	LSG1	98	87.356	Homo_sapiens
ENSFDAG00000017373	LSG1	99	66.304	ENSAPOG00000009694	lsg1	99	65.586	Acanthochromis_polyacanthus
ENSFDAG00000017373	LSG1	99	77.293	ENSAMEG00000009343	LSG1	99	77.293	Ailuropoda_melanoleuca
ENSFDAG00000017373	LSG1	98	64.873	ENSACIG00000012406	lsg1	99	64.341	Amphilophus_citrinellus
ENSFDAG00000017373	LSG1	99	64.877	ENSAOCG00000016066	lsg1	99	65.528	Amphiprion_ocellaris
ENSFDAG00000017373	LSG1	99	64.877	ENSAPEG00000003252	lsg1	99	64.969	Amphiprion_percula
ENSFDAG00000017373	LSG1	98	65.079	ENSATEG00000011794	lsg1	99	64.852	Anabas_testudineus
ENSFDAG00000017373	LSG1	95	65.016	ENSACAG00000004222	LSG1	99	64.706	Anolis_carolinensis
ENSFDAG00000017373	LSG1	100	78.756	ENSANAG00000021153	LSG1	100	78.419	Aotus_nancymaae
ENSFDAG00000017373	LSG1	99	64.482	ENSACLG00000000520	lsg1	99	62.538	Astatotilapia_calliptera
ENSFDAG00000017373	LSG1	99	63.166	ENSAMXG00000008271	lsg1	99	62.557	Astyanax_mexicanus
ENSFDAG00000017373	LSG1	100	77.914	ENSBTAG00000008461	LSG1	100	77.914	Bos_taurus
ENSFDAG00000017373	LSG1	65	49.296	WBGene00016907	C53H9.2	75	64.646	Caenorhabditis_elegans
ENSFDAG00000017373	LSG1	100	78.604	ENSCJAG00000013962	LSG1	100	78.604	Callithrix_jacchus
ENSFDAG00000017373	LSG1	95	77.280	ENSCAFG00000013445	LSG1	99	76.825	Canis_familiaris
ENSFDAG00000017373	LSG1	99	76.399	ENSCAFG00020002216	LSG1	99	77.047	Canis_lupus_dingo
ENSFDAG00000017373	LSG1	99	77.054	ENSCHIG00000015769	LSG1	99	77.984	Capra_hircus
ENSFDAG00000017373	LSG1	100	77.845	ENSTSYG00000001447	LSG1	100	78.604	Carlito_syrichta
ENSFDAG00000017373	LSG1	95	81.138	ENSCAPG00000009856	LSG1	100	80.844	Cavia_aperea
ENSFDAG00000017373	LSG1	100	77.376	ENSCCAG00000035744	LSG1	100	77.376	Cebus_capucinus
ENSFDAG00000017373	LSG1	100	79.211	ENSCATG00000042060	LSG1	100	77.376	Cercocebus_atys
ENSFDAG00000017373	LSG1	100	79.363	ENSCSAG00000008796	LSG1	92	79.363	Chlorocebus_sabaeus
ENSFDAG00000017373	LSG1	99	67.372	ENSCPBG00000015941	LSG1	83	66.617	Chrysemys_picta_bellii
ENSFDAG00000017373	LSG1	68	62.051	ENSCING00000007079	-	87	69.880	Ciona_intestinalis
ENSFDAG00000017373	LSG1	64	69.461	ENSCSAVG00000002514	-	83	69.461	Ciona_savignyi
ENSFDAG00000017373	LSG1	100	79.211	ENSCANG00000030709	LSG1	100	78.875	Colobus_angolensis_palliatus
ENSFDAG00000017373	LSG1	100	79.300	ENSCGRG00001019846	Lsg1	100	79.661	Cricetulus_griseus_chok1gshd
ENSFDAG00000017373	LSG1	100	79.300	ENSCGRG00000014617	Lsg1	100	79.452	Cricetulus_griseus_crigri
ENSFDAG00000017373	LSG1	98	62.346	ENSCSEG00000008522	lsg1	99	61.725	Cynoglossus_semilaevis
ENSFDAG00000017373	LSG1	97	65.600	ENSCVAG00000002484	lsg1	99	64.651	Cyprinodon_variegatus
ENSFDAG00000017373	LSG1	99	65.794	ENSDARG00000015352	lsg1	99	65.480	Danio_rerio
ENSFDAG00000017373	LSG1	100	77.017	ENSDNOG00000006224	LSG1	100	76.712	Dasypus_novemcinctus
ENSFDAG00000017373	LSG1	99	48.223	FBgn0266284	Ns3	99	48.302	Drosophila_melanogaster
ENSFDAG00000017373	LSG1	88	89.333	ENSETEG00000003888	LSG1	89	89.333	Echinops_telfairi
ENSFDAG00000017373	LSG1	88	56.559	ENSEBUG00000003119	lsg1	85	56.633	Eptatretus_burgeri
ENSFDAG00000017373	LSG1	100	78.614	ENSEASG00005000678	LSG1	100	78.614	Equus_asinus_asinus
ENSFDAG00000017373	LSG1	100	78.765	ENSECAG00000017659	LSG1	100	78.765	Equus_caballus
ENSFDAG00000017373	LSG1	86	78.448	ENSEEUG00000015217	LSG1	87	78.448	Erinaceus_europaeus
ENSFDAG00000017373	LSG1	99	61.883	ENSELUG00000023973	lsg1	99	60.823	Esox_lucius
ENSFDAG00000017373	LSG1	99	77.677	ENSFCAG00000024957	LSG1	99	77.677	Felis_catus
ENSFDAG00000017373	LSG1	92	64.274	ENSFALG00000007210	LSG1	94	64.495	Ficedula_albicollis
ENSFDAG00000017373	LSG1	97	63.333	ENSFHEG00000003680	lsg1	99	62.809	Fundulus_heteroclitus
ENSFDAG00000017373	LSG1	83	70.213	ENSGMOG00000015834	lsg1	86	68.273	Gadus_morhua
ENSFDAG00000017373	LSG1	99	62.312	ENSGALG00000007058	LSG1	87	63.389	Gallus_gallus
ENSFDAG00000017373	LSG1	97	65.600	ENSGAFG00000015831	lsg1	99	64.806	Gambusia_affinis
ENSFDAG00000017373	LSG1	98	63.150	ENSGACG00000009323	lsg1	99	62.423	Gasterosteus_aculeatus
ENSFDAG00000017373	LSG1	100	79.211	ENSGGOG00000000520	LSG1	100	78.875	Gorilla_gorilla
ENSFDAG00000017373	LSG1	99	64.679	ENSHBUG00000005659	lsg1	99	62.844	Haplochromis_burtoni
ENSFDAG00000017373	LSG1	100	86.265	ENSHGLG00000017390	LSG1	100	86.728	Heterocephalus_glaber_female
ENSFDAG00000017373	LSG1	100	85.957	ENSHGLG00100018587	LSG1	100	86.420	Heterocephalus_glaber_male
ENSFDAG00000017373	LSG1	97	64.139	ENSHCOG00000016848	lsg1	99	63.158	Hippocampus_comes
ENSFDAG00000017373	LSG1	99	64.596	ENSIPUG00000008631	lsg1	99	64.596	Ictalurus_punctatus
ENSFDAG00000017373	LSG1	81	78.788	ENSSTOG00000010234	LSG1	99	78.788	Ictidomys_tridecemlineatus
ENSFDAG00000017373	LSG1	100	77.538	ENSJJAG00000015513	Lsg1	100	77.538	Jaculus_jaculus
ENSFDAG00000017373	LSG1	98	62.798	ENSKMAG00000009681	lsg1	99	62.617	Kryptolebias_marmoratus
ENSFDAG00000017373	LSG1	98	62.739	ENSLBEG00000024261	lsg1	99	61.934	Labrus_bergylta
ENSFDAG00000017373	LSG1	99	65.813	ENSLACG00000013399	LSG1	99	65.465	Latimeria_chalumnae
ENSFDAG00000017373	LSG1	98	65.109	ENSLOCG00000004918	lsg1	99	64.977	Lepisosteus_oculatus
ENSFDAG00000017373	LSG1	100	78.483	ENSLAFG00000012919	-	100	78.483	Loxodonta_africana
ENSFDAG00000017373	LSG1	100	79.211	ENSMFAG00000039903	LSG1	100	77.376	Macaca_fascicularis
ENSFDAG00000017373	LSG1	100	79.363	ENSMMUG00000010708	LSG1	100	79.363	Macaca_mulatta
ENSFDAG00000017373	LSG1	100	79.363	ENSMNEG00000031538	LSG1	100	77.376	Macaca_nemestrina
ENSFDAG00000017373	LSG1	100	79.514	ENSMLEG00000041184	LSG1	100	79.514	Mandrillus_leucophaeus
ENSFDAG00000017373	LSG1	99	63.060	ENSMAMG00000000470	lsg1	99	62.346	Mastacembelus_armatus
ENSFDAG00000017373	LSG1	99	64.985	ENSMZEG00005017865	lsg1	99	62.997	Maylandia_zebra
ENSFDAG00000017373	LSG1	88	63.682	ENSMGAG00000007050	LSG1	99	64.395	Meleagris_gallopavo
ENSFDAG00000017373	LSG1	91	77.172	ENSMAUG00000016976	Lsg1	93	78.024	Mesocricetus_auratus
ENSFDAG00000017373	LSG1	100	78.201	ENSMICG00000049087	LSG1	100	78.201	Microcebus_murinus
ENSFDAG00000017373	LSG1	100	77.710	ENSMOCG00000022136	Lsg1	100	78.015	Microtus_ochrogaster
ENSFDAG00000017373	LSG1	84	73.043	ENSMMOG00000008884	lsg1	96	71.605	Mola_mola
ENSFDAG00000017373	LSG1	99	58.869	ENSMODG00000019828	LSG1	99	58.563	Monodelphis_domestica
ENSFDAG00000017373	LSG1	100	79.070	MGP_CAROLIEiJ_G0020648	Lsg1	100	79.070	Mus_caroli
ENSFDAG00000017373	LSG1	100	79.070	ENSMUSG00000022538	Lsg1	100	79.070	Mus_musculus
ENSFDAG00000017373	LSG1	98	79.563	MGP_PahariEiJ_G0016352	Lsg1	100	79.601	Mus_pahari
ENSFDAG00000017373	LSG1	100	79.444	MGP_SPRETEiJ_G0021544	Lsg1	100	79.444	Mus_spretus
ENSFDAG00000017373	LSG1	99	77.560	ENSMPUG00000003734	LSG1	99	77.560	Mustela_putorius_furo
ENSFDAG00000017373	LSG1	99	78.387	ENSMLUG00000012548	LSG1	99	78.387	Myotis_lucifugus
ENSFDAG00000017373	LSG1	100	77.914	ENSNGAG00000021872	Lsg1	100	77.914	Nannospalax_galili
ENSFDAG00000017373	LSG1	100	78.431	ENSNLEG00000008293	LSG1	100	78.431	Nomascus_leucogenys
ENSFDAG00000017373	LSG1	69	70.103	ENSMEUG00000009041	-	81	70.103	Notamacropus_eugenii
ENSFDAG00000017373	LSG1	99	64.242	ENSONIG00000002635	lsg1	99	63.939	Oreochromis_niloticus
ENSFDAG00000017373	LSG1	95	70.645	ENSOANG00000012742	LSG1	99	68.998	Ornithorhynchus_anatinus
ENSFDAG00000017373	LSG1	100	80.422	ENSOCUG00000004817	LSG1	100	79.669	Oryctolagus_cuniculus
ENSFDAG00000017373	LSG1	98	63.593	ENSORLG00000007695	lsg1	99	63.339	Oryzias_latipes
ENSFDAG00000017373	LSG1	98	62.739	ENSORLG00020016286	lsg1	99	62.715	Oryzias_latipes_hni
ENSFDAG00000017373	LSG1	98	62.898	ENSORLG00015012025	lsg1	99	62.559	Oryzias_latipes_hsok
ENSFDAG00000017373	LSG1	98	62.798	ENSOMEG00000022379	lsg1	99	61.838	Oryzias_melastigma
ENSFDAG00000017373	LSG1	100	77.677	ENSOGAG00000003475	LSG1	100	78.733	Otolemur_garnettii
ENSFDAG00000017373	LSG1	99	77.147	ENSOARG00000020403	LSG1	99	77.147	Ovis_aries
ENSFDAG00000017373	LSG1	100	78.875	ENSPPAG00000029271	LSG1	100	78.875	Pan_paniscus
ENSFDAG00000017373	LSG1	99	76.866	ENSPPRG00000010281	LSG1	99	76.866	Panthera_pardus
ENSFDAG00000017373	LSG1	99	77.828	ENSPTIG00000010789	LSG1	99	77.828	Panthera_tigris_altaica
ENSFDAG00000017373	LSG1	100	79.059	ENSPTRG00000015760	LSG1	100	78.723	Pan_troglodytes
ENSFDAG00000017373	LSG1	100	79.970	ENSPANG00000018249	LSG1	100	78.130	Papio_anubis
ENSFDAG00000017373	LSG1	98	64.038	ENSPKIG00000002895	lsg1	100	64.087	Paramormyrops_kingsleyae
ENSFDAG00000017373	LSG1	96	63.495	ENSPSIG00000009821	LSG1	99	63.453	Pelodiscus_sinensis
ENSFDAG00000017373	LSG1	95	64.935	ENSPMGG00000000931	lsg1	99	64.553	Periophthalmus_magnuspinnatus
ENSFDAG00000017373	LSG1	100	78.931	ENSPEMG00000012082	-	100	78.626	Peromyscus_maniculatus_bairdii
ENSFDAG00000017373	LSG1	99	59.762	ENSPMAG00000007451	lsg1	99	59.248	Petromyzon_marinus
ENSFDAG00000017373	LSG1	99	67.188	ENSPCIG00000013890	LSG1	82	67.188	Phascolarctos_cinereus
ENSFDAG00000017373	LSG1	97	66.086	ENSPFOG00000021882	lsg1	99	64.472	Poecilia_formosa
ENSFDAG00000017373	LSG1	97	65.293	ENSPLAG00000019536	lsg1	99	63.706	Poecilia_latipinna
ENSFDAG00000017373	LSG1	97	65.245	ENSPMEG00000017281	lsg1	99	63.664	Poecilia_mexicana
ENSFDAG00000017373	LSG1	97	55.988	ENSPREG00000006048	lsg1	99	55.251	Poecilia_reticulata
ENSFDAG00000017373	LSG1	92	77.100	ENSPPYG00000014425	LSG1	100	76.403	Pongo_abelii
ENSFDAG00000017373	LSG1	90	86.667	ENSPCAG00000005511	LSG1	90	86.667	Procavia_capensis
ENSFDAG00000017373	LSG1	100	77.727	ENSPCOG00000012360	LSG1	100	77.997	Propithecus_coquereli
ENSFDAG00000017373	LSG1	99	64.329	ENSPNYG00000021994	lsg1	99	62.387	Pundamilia_nyererei
ENSFDAG00000017373	LSG1	99	65.644	ENSPNAG00000015533	lsg1	99	65.284	Pygocentrus_nattereri
ENSFDAG00000017373	LSG1	100	78.811	ENSRNOG00000001727	Lsg1	100	78.811	Rattus_norvegicus
ENSFDAG00000017373	LSG1	100	78.571	ENSRBIG00000029053	LSG1	100	78.539	Rhinopithecus_bieti
ENSFDAG00000017373	LSG1	100	78.571	ENSRROG00000037702	LSG1	100	78.539	Rhinopithecus_roxellana
ENSFDAG00000017373	LSG1	63	56.886	YGL099W	LSG1	65	56.886	Saccharomyces_cerevisiae
ENSFDAG00000017373	LSG1	100	78.604	ENSSBOG00000034938	LSG1	100	78.267	Saimiri_boliviensis_boliviensis
ENSFDAG00000017373	LSG1	77	64.368	ENSSHAG00000003487	LSG1	99	64.368	Sarcophilus_harrisii
ENSFDAG00000017373	LSG1	98	64.038	ENSSFOG00015008955	lsg1	99	63.945	Scleropages_formosus
ENSFDAG00000017373	LSG1	98	64.780	ENSSDUG00000004622	lsg1	99	64.407	Seriola_dumerili
ENSFDAG00000017373	LSG1	98	65.127	ENSSLDG00000010869	lsg1	99	64.286	Seriola_lalandi_dorsalis
ENSFDAG00000017373	LSG1	82	78.235	ENSSARG00000012981	LSG1	81	78.171	Sorex_araneus
ENSFDAG00000017373	LSG1	99	67.580	ENSSPUG00000016347	LSG1	99	66.159	Sphenodon_punctatus
ENSFDAG00000017373	LSG1	99	63.566	ENSSPAG00000005508	lsg1	99	62.809	Stegastes_partitus
ENSFDAG00000017373	LSG1	99	77.484	ENSSSCG00000011827	LSG1	99	77.484	Sus_scrofa
ENSFDAG00000017373	LSG1	88	63.193	ENSTGUG00000009068	LSG1	99	62.689	Taeniopygia_guttata
ENSFDAG00000017373	LSG1	97	60.218	ENSTRUG00000017380	lsg1	99	61.154	Takifugu_rubripes
ENSFDAG00000017373	LSG1	97	64.669	ENSTNIG00000015570	lsg1	99	63.581	Tetraodon_nigroviridis
ENSFDAG00000017373	LSG1	99	71.057	ENSTTRG00000000559	LSG1	99	70.245	Tursiops_truncatus
ENSFDAG00000017373	LSG1	99	78.030	ENSUAMG00000012454	LSG1	99	78.163	Ursus_americanus
ENSFDAG00000017373	LSG1	99	78.030	ENSUMAG00000000855	LSG1	99	78.163	Ursus_maritimus
ENSFDAG00000017373	LSG1	95	72.800	ENSVPAG00000012400	LSG1	99	71.955	Vicugna_pacos
ENSFDAG00000017373	LSG1	95	76.960	ENSVVUG00000008956	LSG1	97	76.508	Vulpes_vulpes
ENSFDAG00000017373	LSG1	99	64.977	ENSXETG00000003451	lsg1	99	64.142	Xenopus_tropicalis
ENSFDAG00000017373	LSG1	97	64.715	ENSXCOG00000003239	lsg1	99	64.396	Xiphophorus_couchianus
ENSFDAG00000017373	LSG1	97	64.241	ENSXMAG00000005536	lsg1	99	63.897	Xiphophorus_maculatus