EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000017683 (Gene tree)
Gene ID: 104871411
Gene Symbol: -
Alias: -
Full Name: survival of motor neuron 1%2C telomeric
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 13602 bases
Position: chrKN122864.1:7564036-7577637
Accession: 104871411
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000009762	SMN	PF06003.12	3.8e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000022706	-	891	XM_010637315	ENSFDAP00000009762	296 (aa)	XP_010635617	UPI00053F6360

Gene Model

Click here to download ENSFDAG00000017683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000017683's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000017683	-	99	79.798	ENSG00000205571	SMN2	87	95.000	Homo_sapiens
ENSFDAG00000017683	-	99	79.798	ENSG00000172062	SMN1	99	78.788	Homo_sapiens
ENSFDAG00000017683	-	92	51.613	ENSAPOG00000011324	smn1	94	48.929	Acanthochromis_polyacanthus
ENSFDAG00000017683	-	96	82.517	ENSAMEG00000003316	-	96	81.481	Ailuropoda_melanoleuca
ENSFDAG00000017683	-	53	51.899	ENSACIG00000007598	smn1	77	57.246	Amphilophus_citrinellus
ENSFDAG00000017683	-	88	44.280	ENSACIG00000019772	-	97	46.442	Amphilophus_citrinellus
ENSFDAG00000017683	-	92	52.313	ENSAOCG00000024444	smn1	94	49.286	Amphiprion_ocellaris
ENSFDAG00000017683	-	92	49.320	ENSAPEG00000016504	smn1	94	49.286	Amphiprion_percula
ENSFDAG00000017683	-	89	51.460	ENSATEG00000002182	smn1	79	49.817	Anabas_testudineus
ENSFDAG00000017683	-	67	54.000	ENSAPLG00000010912	-	97	54.315	Anas_platyrhynchos
ENSFDAG00000017683	-	93	56.940	ENSACAG00000010017	-	95	57.544	Anolis_carolinensis
ENSFDAG00000017683	-	99	76.589	ENSANAG00000032133	-	99	75.585	Aotus_nancymaae
ENSFDAG00000017683	-	92	46.429	ENSACLG00000007308	smn1	88	50.187	Astatotilapia_calliptera
ENSFDAG00000017683	-	96	78.397	ENSBTAG00000005743	SMN2	99	78.082	Bos_taurus
ENSFDAG00000017683	-	99	79.195	ENSCJAG00000016290	-	99	78.188	Callithrix_jacchus
ENSFDAG00000017683	-	96	82.517	ENSCAFG00000007812	SMN	100	81.481	Canis_familiaris
ENSFDAG00000017683	-	96	82.456	ENSCAFG00020019229	-	93	81.419	Canis_lupus_dingo
ENSFDAG00000017683	-	96	78.547	ENSCHIG00000015559	-	99	77.333	Capra_hircus
ENSFDAG00000017683	-	99	81.695	ENSTSYG00000012058	-	99	80.678	Carlito_syrichta
ENSFDAG00000017683	-	76	74.667	ENSCAPG00000011021	-	100	76.106	Cavia_aperea
ENSFDAG00000017683	-	100	84.564	ENSCPOG00000036973	-	100	84.564	Cavia_porcellus
ENSFDAG00000017683	-	99	86.824	ENSCPOG00000012328	-	100	86.824	Cavia_porcellus
ENSFDAG00000017683	-	99	78.716	ENSCCAG00000018127	-	99	77.703	Cebus_capucinus
ENSFDAG00000017683	-	99	80.135	ENSCATG00000037002	-	99	79.125	Cercocebus_atys
ENSFDAG00000017683	-	100	84.797	ENSCLAG00000000284	-	100	84.797	Chinchilla_lanigera
ENSFDAG00000017683	-	99	80.471	ENSCSAG00000015688	-	99	79.461	Chlorocebus_sabaeus
ENSFDAG00000017683	-	86	70.428	ENSCHOG00000007346	-	100	67.416	Choloepus_hoffmanni
ENSFDAG00000017683	-	93	60.870	ENSCPBG00000010968	-	96	59.245	Chrysemys_picta_bellii
ENSFDAG00000017683	-	99	81.017	ENSCANG00000038242	-	100	79.433	Colobus_angolensis_palliatus
ENSFDAG00000017683	-	95	73.776	ENSCANG00000033324	-	95	73.427	Colobus_angolensis_palliatus
ENSFDAG00000017683	-	100	77.181	ENSCGRG00001017959	-	100	77.181	Cricetulus_griseus_chok1gshd
ENSFDAG00000017683	-	100	61.149	ENSCGRG00001016998	-	100	61.486	Cricetulus_griseus_chok1gshd
ENSFDAG00000017683	-	100	77.181	ENSCGRG00000007698	Smn1	100	77.181	Cricetulus_griseus_crigri
ENSFDAG00000017683	-	92	45.361	ENSCSEG00000015227	smn1	97	45.035	Cynoglossus_semilaevis
ENSFDAG00000017683	-	92	48.084	ENSCVAG00000007498	smn1	95	48.936	Cyprinodon_variegatus
ENSFDAG00000017683	-	94	49.485	ENSDARG00000018494	smn1	96	48.621	Danio_rerio
ENSFDAG00000017683	-	83	80.000	ENSDNOG00000007283	-	100	80.000	Dasypus_novemcinctus
ENSFDAG00000017683	-	77	66.667	ENSDNOG00000045949	-	95	64.912	Dasypus_novemcinctus
ENSFDAG00000017683	-	100	73.401	ENSDORG00000007082	Smn1	99	72.054	Dipodomys_ordii
ENSFDAG00000017683	-	73	65.581	ENSETEG00000001406	-	100	61.860	Echinops_telfairi
ENSFDAG00000017683	-	94	38.339	ENSEBUG00000011902	smn1	98	38.926	Eptatretus_burgeri
ENSFDAG00000017683	-	89	73.507	ENSEASG00005018000	-	89	75.290	Equus_asinus_asinus
ENSFDAG00000017683	-	96	81.185	ENSECAG00000015215	-	100	80.268	Equus_caballus
ENSFDAG00000017683	-	86	73.622	ENSEEUG00000015777	-	100	73.622	Erinaceus_europaeus
ENSFDAG00000017683	-	92	52.465	ENSELUG00000018067	smn1	94	48.929	Esox_lucius
ENSFDAG00000017683	-	100	79.530	ENSFCAG00000028292	SMN	100	79.530	Felis_catus
ENSFDAG00000017683	-	91	56.410	ENSFALG00000012320	-	94	57.509	Ficedula_albicollis
ENSFDAG00000017683	-	91	43.206	ENSFHEG00000018508	smn1	97	45.775	Fundulus_heteroclitus
ENSFDAG00000017683	-	95	49.117	ENSGMOG00000017279	smn1	95	43.463	Gadus_morhua
ENSFDAG00000017683	-	92	58.759	ENSGALG00000002430	SMN	95	56.934	Gallus_gallus
ENSFDAG00000017683	-	92	49.306	ENSGAFG00000009501	smn1	94	46.809	Gambusia_affinis
ENSFDAG00000017683	-	92	47.080	ENSGACG00000010584	smn1	91	45.956	Gasterosteus_aculeatus
ENSFDAG00000017683	-	96	58.741	ENSGAGG00000011374	-	94	60.870	Gopherus_agassizii
ENSFDAG00000017683	-	92	39.500	ENSGAGG00000013639	-	93	38.889	Gopherus_agassizii
ENSFDAG00000017683	-	98	69.416	ENSGGOG00000003872	-	100	69.751	Gorilla_gorilla
ENSFDAG00000017683	-	68	77.500	ENSGGOG00000026704	-	99	75.229	Gorilla_gorilla
ENSFDAG00000017683	-	92	45.018	ENSHBUG00000013987	smn1	94	50.000	Haplochromis_burtoni
ENSFDAG00000017683	-	100	86.486	ENSHGLG00000001905	-	100	86.486	Heterocephalus_glaber_female
ENSFDAG00000017683	-	100	90.203	ENSHGLG00000001018	-	100	90.203	Heterocephalus_glaber_female
ENSFDAG00000017683	-	100	90.203	ENSHGLG00100011252	-	100	90.203	Heterocephalus_glaber_male
ENSFDAG00000017683	-	96	85.915	ENSHGLG00100018676	-	100	85.915	Heterocephalus_glaber_male
ENSFDAG00000017683	-	89	49.270	ENSHCOG00000017136	smn1	87	46.269	Hippocampus_comes
ENSFDAG00000017683	-	94	48.789	ENSIPUG00000012580	smn1	86	45.051	Ictalurus_punctatus
ENSFDAG00000017683	-	95	81.560	ENSSTOG00000012288	-	100	81.560	Ictidomys_tridecemlineatus
ENSFDAG00000017683	-	60	61.453	ENSJJAG00000014853	-	100	61.735	Jaculus_jaculus
ENSFDAG00000017683	-	92	47.735	ENSKMAG00000007239	smn1	96	47.619	Kryptolebias_marmoratus
ENSFDAG00000017683	-	92	49.310	ENSLBEG00000022550	smn1	94	48.872	Labrus_bergylta
ENSFDAG00000017683	-	94	37.113	ENSLACG00000009808	-	97	36.634	Latimeria_chalumnae
ENSFDAG00000017683	-	92	50.923	ENSLOCG00000011339	smn1	94	51.636	Lepisosteus_oculatus
ENSFDAG00000017683	-	100	79.333	ENSLAFG00000003425	-	97	79.333	Loxodonta_africana
ENSFDAG00000017683	-	99	80.808	ENSMFAG00000031523	SMN1	99	79.798	Macaca_fascicularis
ENSFDAG00000017683	-	99	76.094	ENSMFAG00000008812	-	99	75.084	Macaca_fascicularis
ENSFDAG00000017683	-	99	75.084	ENSMMUG00000030594	-	99	74.411	Macaca_mulatta
ENSFDAG00000017683	-	99	80.808	ENSMMUG00000020214	SMN1	99	79.798	Macaca_mulatta
ENSFDAG00000017683	-	74	68.326	ENSMNEG00000036423	-	86	66.516	Macaca_nemestrina
ENSFDAG00000017683	-	99	80.471	ENSMNEG00000035094	-	99	80.208	Macaca_nemestrina
ENSFDAG00000017683	-	99	80.808	ENSMLEG00000041902	-	99	79.798	Mandrillus_leucophaeus
ENSFDAG00000017683	-	92	50.538	ENSMAMG00000011034	smn1	94	45.652	Mastacembelus_armatus
ENSFDAG00000017683	-	92	45.018	ENSMZEG00005013634	smn1	94	50.000	Maylandia_zebra
ENSFDAG00000017683	-	66	56.633	ENSMGAG00000008889	-	95	50.000	Meleagris_gallopavo
ENSFDAG00000017683	-	100	76.510	ENSMAUG00000010262	Smn1	100	76.510	Mesocricetus_auratus
ENSFDAG00000017683	-	100	69.333	ENSMICG00000034708	-	100	78.125	Microcebus_murinus
ENSFDAG00000017683	-	100	75.839	ENSMOCG00000017833	Smn1	100	75.839	Microtus_ochrogaster
ENSFDAG00000017683	-	90	47.601	ENSMMOG00000005504	smn1	93	46.792	Mola_mola
ENSFDAG00000017683	-	97	67.241	ENSMODG00000001436	-	97	67.698	Monodelphis_domestica
ENSFDAG00000017683	-	92	46.403	ENSMALG00000008025	smn1	94	46.975	Monopterus_albus
ENSFDAG00000017683	-	100	76.589	MGP_CAROLIEiJ_G0018836	Smn1	100	76.589	Mus_caroli
ENSFDAG00000017683	-	100	75.585	ENSMUSG00000021645	Smn1	100	76.254	Mus_musculus
ENSFDAG00000017683	-	100	74.074	MGP_PahariEiJ_G0015911	Smn1	100	74.411	Mus_pahari
ENSFDAG00000017683	-	100	75.585	MGP_SPRETEiJ_G0019718	Smn1	100	76.254	Mus_spretus
ENSFDAG00000017683	-	95	81.979	ENSMPUG00000014470	-	98	80.565	Mustela_putorius_furo
ENSFDAG00000017683	-	96	79.252	ENSMLUG00000010603	-	96	78.689	Myotis_lucifugus
ENSFDAG00000017683	-	100	77.517	ENSNGAG00000019833	Smn1	100	77.517	Nannospalax_galili
ENSFDAG00000017683	-	92	44.599	ENSNBRG00000023000	smn1	94	50.362	Neolamprologus_brichardi
ENSFDAG00000017683	-	99	79.125	ENSNLEG00000004454	-	95	82.278	Nomascus_leucogenys
ENSFDAG00000017683	-	77	63.636	ENSMEUG00000011393	-	99	64.655	Notamacropus_eugenii
ENSFDAG00000017683	-	86	79.070	ENSOPRG00000002015	-	100	81.008	Ochotona_princeps
ENSFDAG00000017683	-	95	87.279	ENSODEG00000015976	-	97	87.279	Octodon_degus
ENSFDAG00000017683	-	92	46.014	ENSONIG00000011799	smn1	95	50.000	Oreochromis_niloticus
ENSFDAG00000017683	-	94	63.214	ENSOANG00000001626	-	96	63.082	Ornithorhynchus_anatinus
ENSFDAG00000017683	-	99	72.093	ENSOCUG00000025183	-	100	72.185	Oryctolagus_cuniculus
ENSFDAG00000017683	-	99	77.000	ENSOCUG00000026649	-	99	77.333	Oryctolagus_cuniculus
ENSFDAG00000017683	-	100	79.730	ENSOCUG00000017097	-	99	79.730	Oryctolagus_cuniculus
ENSFDAG00000017683	-	54	56.442	ENSORLG00000010552	smn1	94	48.000	Oryzias_latipes
ENSFDAG00000017683	-	92	50.362	ENSORLG00020007936	smn1	94	49.091	Oryzias_latipes_hni
ENSFDAG00000017683	-	54	56.442	ENSORLG00015022425	smn1	94	48.175	Oryzias_latipes_hsok
ENSFDAG00000017683	-	55	53.086	ENSOMEG00000007824	smn1	94	49.270	Oryzias_melastigma
ENSFDAG00000017683	-	92	71.731	ENSOGAG00000031414	-	100	69.565	Otolemur_garnettii
ENSFDAG00000017683	-	94	76.429	ENSOARG00000005425	-	100	76.429	Ovis_aries
ENSFDAG00000017683	-	99	79.461	ENSPPAG00000036640	-	99	78.451	Pan_paniscus
ENSFDAG00000017683	-	100	79.866	ENSPPRG00000005575	-	100	79.866	Panthera_pardus
ENSFDAG00000017683	-	100	79.599	ENSPTIG00000007745	-	100	79.599	Panthera_tigris_altaica
ENSFDAG00000017683	-	99	79.000	ENSPTRG00000016955	-	95	82.278	Pan_troglodytes
ENSFDAG00000017683	-	99	80.808	ENSPANG00000013601	-	99	79.798	Papio_anubis
ENSFDAG00000017683	-	98	76.190	ENSPANG00000000253	-	98	75.510	Papio_anubis
ENSFDAG00000017683	-	92	49.821	ENSPKIG00000011096	smn1	94	48.188	Paramormyrops_kingsleyae
ENSFDAG00000017683	-	91	58.929	ENSPSIG00000014787	-	87	56.989	Pelodiscus_sinensis
ENSFDAG00000017683	-	92	46.619	ENSPMGG00000012285	smn1	94	46.388	Periophthalmus_magnuspinnatus
ENSFDAG00000017683	-	98	40.803	ENSPMAG00000005004	smn1	99	39.465	Petromyzon_marinus
ENSFDAG00000017683	-	97	68.276	ENSPCIG00000025764	-	99	68.729	Phascolarctos_cinereus
ENSFDAG00000017683	-	92	51.237	ENSPFOG00000007786	smn1	94	47.163	Poecilia_formosa
ENSFDAG00000017683	-	92	51.590	ENSPLAG00000012071	smn1	94	47.518	Poecilia_latipinna
ENSFDAG00000017683	-	92	51.237	ENSPMEG00000017085	smn1	94	47.163	Poecilia_mexicana
ENSFDAG00000017683	-	92	50.000	ENSPREG00000005824	smn1	94	47.872	Poecilia_reticulata
ENSFDAG00000017683	-	91	78.309	ENSPPYG00000015533	-	96	77.206	Pongo_abelii
ENSFDAG00000017683	-	85	50.198	ENSPPYG00000019189	-	96	72.917	Pongo_abelii
ENSFDAG00000017683	-	91	75.912	ENSPCAG00000004187	-	100	75.547	Procavia_capensis
ENSFDAG00000017683	-	89	63.704	ENSPCOG00000022307	-	100	65.926	Propithecus_coquereli
ENSFDAG00000017683	-	100	82.155	ENSPVAG00000005977	-	100	82.155	Pteropus_vampyrus
ENSFDAG00000017683	-	92	44.599	ENSPNYG00000014148	smn1	94	50.362	Pundamilia_nyererei
ENSFDAG00000017683	-	93	47.703	ENSPNAG00000014007	smn1	83	49.648	Pygocentrus_nattereri
ENSFDAG00000017683	-	100	74.916	ENSRNOG00000018067	Smn1	100	74.916	Rattus_norvegicus
ENSFDAG00000017683	-	95	66.784	ENSRBIG00000036775	-	95	66.784	Rhinopithecus_bieti
ENSFDAG00000017683	-	99	80.471	ENSRBIG00000037052	-	99	79.461	Rhinopithecus_bieti
ENSFDAG00000017683	-	99	65.772	ENSRROG00000031088	-	99	65.772	Rhinopithecus_roxellana
ENSFDAG00000017683	-	99	80.471	ENSRROG00000039399	-	99	79.461	Rhinopithecus_roxellana
ENSFDAG00000017683	-	83	71.484	ENSSBOG00000020112	-	87	70.312	Saimiri_boliviensis_boliviensis
ENSFDAG00000017683	-	99	79.932	ENSSBOG00000011665	-	99	78.571	Saimiri_boliviensis_boliviensis
ENSFDAG00000017683	-	97	68.621	ENSSHAG00000001499	-	100	66.548	Sarcophilus_harrisii
ENSFDAG00000017683	-	92	50.182	ENSSFOG00015015507	smn1	94	51.071	Scleropages_formosus
ENSFDAG00000017683	-	92	46.643	ENSSMAG00000007922	smn1	94	43.750	Scophthalmus_maximus
ENSFDAG00000017683	-	92	47.887	ENSSDUG00000018533	smn1	94	46.975	Seriola_dumerili
ENSFDAG00000017683	-	92	48.239	ENSSLDG00000021135	smn1	94	47.331	Seriola_lalandi_dorsalis
ENSFDAG00000017683	-	92	63.504	ENSSPUG00000000373	-	93	63.504	Sphenodon_punctatus
ENSFDAG00000017683	-	92	50.178	ENSSPAG00000004345	smn1	94	48.014	Stegastes_partitus
ENSFDAG00000017683	-	96	62.456	ENSSSCG00000029127	-	97	60.137	Sus_scrofa
ENSFDAG00000017683	-	100	81.208	ENSSSCG00000016970	-	100	81.208	Sus_scrofa
ENSFDAG00000017683	-	72	58.019	ENSSSCG00000033865	-	91	58.333	Sus_scrofa
ENSFDAG00000017683	-	92	57.706	ENSTGUG00000001548	-	99	54.355	Taeniopygia_guttata
ENSFDAG00000017683	-	92	46.367	ENSTRUG00000000736	smn	96	44.681	Takifugu_rubripes
ENSFDAG00000017683	-	93	45.763	ENSTNIG00000009892	smn1	95	43.643	Tetraodon_nigroviridis
ENSFDAG00000017683	-	64	80.423	ENSTBEG00000002399	-	100	79.535	Tupaia_belangeri
ENSFDAG00000017683	-	96	76.842	ENSTTRG00000005080	-	100	76.846	Tursiops_truncatus
ENSFDAG00000017683	-	64	79.365	ENSUAMG00000024947	-	77	77.523	Ursus_americanus
ENSFDAG00000017683	-	96	83.217	ENSUMAG00000007842	-	74	82.155	Ursus_maritimus
ENSFDAG00000017683	-	91	70.111	ENSVPAG00000009887	-	100	69.611	Vicugna_pacos
ENSFDAG00000017683	-	96	82.517	ENSVVUG00000006934	-	100	81.481	Vulpes_vulpes
ENSFDAG00000017683	-	91	35.315	ENSXETG00000004912	-	75	68.966	Xenopus_tropicalis
ENSFDAG00000017683	-	93	54.286	ENSXETG00000018189	smn2	95	53.819	Xenopus_tropicalis
ENSFDAG00000017683	-	93	49.655	ENSXMAG00000001521	smn1	95	47.703	Xiphophorus_maculatus