EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000017723 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: splicing factor proline and glutamine rich
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 6012 bases
Position: chrKN123614.1:1889730-1895741
Accession: 104877009
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000009808	RRM_1	PF00076.22	2.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000022768	-	1017	XM_010645286	ENSFDAP00000009808	338 (aa)	XP_010643588	-

Gene Model

Click here to download ENSFDAG00000017723's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000017723's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000017723	-	79	57.746	ENSFDAG00000002617	PSPC1	75	48.338

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000017723	-	100	90.935	ENSG00000116560	SFPQ	91	98.750	Homo_sapiens
ENSFDAG00000017723	-	100	90.935	ENSAMEG00000000815	SFPQ	80	90.598	Ailuropoda_melanoleuca
ENSFDAG00000017723	-	100	63.739	ENSACIG00000000905	sfpq	55	62.323	Amphilophus_citrinellus
ENSFDAG00000017723	-	100	67.139	ENSATEG00000002981	sfpq	53	66.006	Anabas_testudineus
ENSFDAG00000017723	-	100	82.436	ENSANAG00000027438	-	57	84.503	Aotus_nancymaae
ENSFDAG00000017723	-	100	77.811	ENSANAG00000021268	-	100	76.923	Aotus_nancymaae
ENSFDAG00000017723	-	99	72.700	ENSANAG00000037798	-	99	72.700	Aotus_nancymaae
ENSFDAG00000017723	-	100	64.589	ENSACLG00000022332	sfpq	50	62.890	Astatotilapia_calliptera
ENSFDAG00000017723	-	100	62.890	ENSAMXG00000011538	sfpq	52	62.606	Astyanax_mexicanus
ENSFDAG00000017723	-	100	90.935	ENSBTAG00000016328	SFPQ	50	90.598	Bos_taurus
ENSFDAG00000017723	-	100	90.935	ENSCJAG00000001431	SFPQ	50	90.598	Callithrix_jacchus
ENSFDAG00000017723	-	100	84.703	ENSCAFG00000018271	-	53	83.761	Canis_familiaris
ENSFDAG00000017723	-	100	90.935	ENSCAFG00000003595	-	53	90.598	Canis_familiaris
ENSFDAG00000017723	-	100	84.091	ENSCAFG00000017608	-	52	84.571	Canis_familiaris
ENSFDAG00000017723	-	100	84.703	ENSCAFG00020004881	-	53	83.761	Canis_lupus_dingo
ENSFDAG00000017723	-	100	87.906	ENSCAFG00020010702	-	100	86.982	Canis_lupus_dingo
ENSFDAG00000017723	-	99	77.714	ENSTSYG00000035106	-	98	77.233	Carlito_syrichta
ENSFDAG00000017723	-	100	90.935	ENSTSYG00000037120	-	100	90.598	Carlito_syrichta
ENSFDAG00000017723	-	100	95.627	ENSCPOG00000015018	-	100	95.627	Cavia_porcellus
ENSFDAG00000017723	-	100	90.935	ENSCCAG00000029361	-	50	90.598	Cebus_capucinus
ENSFDAG00000017723	-	100	90.935	ENSCLAG00000009583	-	100	90.598	Chinchilla_lanigera
ENSFDAG00000017723	-	100	90.935	ENSCSAG00000001082	SFPQ	50	90.598	Chlorocebus_sabaeus
ENSFDAG00000017723	-	100	85.836	ENSCHOG00000009131	SFPQ	92	85.470	Choloepus_hoffmanni
ENSFDAG00000017723	-	100	84.594	ENSCPBG00000018674	SFPQ	55	84.225	Chrysemys_picta_bellii
ENSFDAG00000017723	-	100	90.935	ENSCANG00000028087	-	100	90.598	Colobus_angolensis_palliatus
ENSFDAG00000017723	-	100	90.652	ENSCGRG00001011698	Sfpq	50	90.313	Cricetulus_griseus_chok1gshd
ENSFDAG00000017723	-	100	90.652	ENSCGRG00000010128	Sfpq	78	89.459	Cricetulus_griseus_crigri
ENSFDAG00000017723	-	100	65.254	ENSCSEG00000007852	sfpq	53	62.500	Cynoglossus_semilaevis
ENSFDAG00000017723	-	100	62.040	ENSCVAG00000019538	sfpq	52	53.951	Cyprinodon_variegatus
ENSFDAG00000017723	-	100	61.190	ENSDARG00000011564	sfpq	100	83.478	Danio_rerio
ENSFDAG00000017723	-	100	90.935	ENSDNOG00000049454	SFPQ	50	90.598	Dasypus_novemcinctus
ENSFDAG00000017723	-	100	90.935	ENSDORG00000008109	Sfpq	50	90.598	Dipodomys_ordii
ENSFDAG00000017723	-	100	90.313	ENSETEG00000001095	SFPQ	50	90.313	Echinops_telfairi
ENSFDAG00000017723	-	100	90.935	ENSEASG00005012012	SFPQ	50	90.598	Equus_asinus_asinus
ENSFDAG00000017723	-	100	90.935	ENSECAG00000000642	SFPQ	50	90.598	Equus_caballus
ENSFDAG00000017723	-	100	64.972	ENSELUG00000023145	sfpq	53	61.473	Esox_lucius
ENSFDAG00000017723	-	100	90.935	ENSFCAG00000042862	SFPQ	50	90.598	Felis_catus
ENSFDAG00000017723	-	100	85.836	ENSFALG00000000731	SFPQ	100	85.470	Ficedula_albicollis
ENSFDAG00000017723	-	100	65.156	ENSGMOG00000011957	sfpq	53	64.023	Gadus_morhua
ENSFDAG00000017723	-	100	66.384	ENSGMOG00000011950	SFPQ	60	65.254	Gadus_morhua
ENSFDAG00000017723	-	100	85.836	ENSGALG00000002514	SFPQ	54	85.470	Gallus_gallus
ENSFDAG00000017723	-	100	59.605	ENSGAFG00000014571	sfpq	50	57.003	Gambusia_affinis
ENSFDAG00000017723	-	100	65.909	ENSGACG00000002034	sfpq	55	64.489	Gasterosteus_aculeatus
ENSFDAG00000017723	-	100	90.935	ENSGGOG00000026354	SFPQ	100	90.598	Gorilla_gorilla
ENSFDAG00000017723	-	100	64.589	ENSHBUG00000016818	sfpq	50	62.890	Haplochromis_burtoni
ENSFDAG00000017723	-	100	90.169	ENSHGLG00000012001	SFPQ	51	89.831	Heterocephalus_glaber_female
ENSFDAG00000017723	-	100	90.935	ENSHGLG00100004136	-	100	90.598	Heterocephalus_glaber_male
ENSFDAG00000017723	-	100	65.915	ENSHCOG00000008612	sfpq	55	57.386	Hippocampus_comes
ENSFDAG00000017723	-	100	63.739	ENSIPUG00000013076	SFPQ	58	62.890	Ictalurus_punctatus
ENSFDAG00000017723	-	100	90.935	ENSSTOG00000014004	-	100	90.598	Ictidomys_tridecemlineatus
ENSFDAG00000017723	-	100	90.652	ENSJJAG00000015633	Sfpq	50	90.313	Jaculus_jaculus
ENSFDAG00000017723	-	100	69.382	ENSLACG00000014728	SFPQ	57	69.748	Latimeria_chalumnae
ENSFDAG00000017723	-	100	70.538	ENSLOCG00000001067	sfpq	54	70.740	Lepisosteus_oculatus
ENSFDAG00000017723	-	100	90.652	ENSLAFG00000015951	SFPQ	56	89.459	Loxodonta_africana
ENSFDAG00000017723	-	100	90.935	ENSMFAG00000000797	SFPQ	50	90.598	Macaca_fascicularis
ENSFDAG00000017723	-	100	90.935	ENSMMUG00000019154	SFPQ	50	90.598	Macaca_mulatta
ENSFDAG00000017723	-	100	90.935	ENSMNEG00000038895	SFPQ	50	90.598	Macaca_nemestrina
ENSFDAG00000017723	-	93	87.267	ENSMLEG00000035352	-	99	88.328	Mandrillus_leucophaeus
ENSFDAG00000017723	-	100	87.819	ENSMLEG00000010643	-	100	87.464	Mandrillus_leucophaeus
ENSFDAG00000017723	-	100	67.705	ENSMAMG00000007875	sfpq	53	66.572	Mastacembelus_armatus
ENSFDAG00000017723	-	100	64.306	ENSMZEG00005026091	sfpq	50	62.890	Maylandia_zebra
ENSFDAG00000017723	-	100	80.548	ENSMGAG00000004237	SFPQ	93	80.663	Meleagris_gallopavo
ENSFDAG00000017723	-	100	91.977	ENSMAUG00000006402	Sfpq	50	89.235	Mesocricetus_auratus
ENSFDAG00000017723	-	100	90.935	ENSMICG00000027265	SFPQ	50	90.598	Microcebus_murinus
ENSFDAG00000017723	-	100	85.836	ENSMOCG00000019075	Sfpq	72	85.470	Microtus_ochrogaster
ENSFDAG00000017723	-	100	64.306	ENSMMOG00000001074	sfpq	53	63.068	Mola_mola
ENSFDAG00000017723	-	100	87.819	ENSMODG00000017937	SFPQ	52	87.464	Monodelphis_domestica
ENSFDAG00000017723	-	100	64.489	ENSMALG00000010381	sfpq	52	62.784	Monopterus_albus
ENSFDAG00000017723	-	100	90.652	MGP_CAROLIEiJ_G0026487	Sfpq	50	90.313	Mus_caroli
ENSFDAG00000017723	-	100	90.652	ENSMUSG00000028820	Sfpq	50	90.313	Mus_musculus
ENSFDAG00000017723	-	100	90.652	MGP_PahariEiJ_G0028818	Sfpq	50	90.313	Mus_pahari
ENSFDAG00000017723	-	100	90.652	MGP_SPRETEiJ_G0027466	Sfpq	50	90.313	Mus_spretus
ENSFDAG00000017723	-	87	89.286	ENSMPUG00000014931	-	98	87.908	Mustela_putorius_furo
ENSFDAG00000017723	-	100	90.652	ENSMLUG00000027090	SFPQ	79	89.459	Myotis_lucifugus
ENSFDAG00000017723	-	100	90.935	ENSNGAG00000000888	Sfpq	50	90.598	Nannospalax_galili
ENSFDAG00000017723	-	100	64.873	ENSNBRG00000017479	sfpq	50	63.173	Neolamprologus_brichardi
ENSFDAG00000017723	-	100	90.935	ENSNLEG00000035521	-	100	90.598	Nomascus_leucogenys
ENSFDAG00000017723	-	100	87.252	ENSMEUG00000014082	SFPQ	50	85.470	Notamacropus_eugenii
ENSFDAG00000017723	-	100	90.935	ENSOPRG00000013696	SFPQ	50	90.598	Ochotona_princeps
ENSFDAG00000017723	-	96	81.173	ENSODEG00000005485	SFPQ	59	77.469	Octodon_degus
ENSFDAG00000017723	-	100	65.439	ENSONIG00000017737	sfpq	50	63.739	Oreochromis_niloticus
ENSFDAG00000017723	-	100	88.669	ENSOANG00000008789	-	100	88.319	Ornithorhynchus_anatinus
ENSFDAG00000017723	-	100	90.935	ENSOCUG00000001877	SFPQ	69	90.598	Oryctolagus_cuniculus
ENSFDAG00000017723	-	100	90.652	ENSOGAG00000027710	SFPQ	66	90.313	Otolemur_garnettii
ENSFDAG00000017723	-	100	90.935	ENSOARG00000019439	SFPQ	54	89.744	Ovis_aries
ENSFDAG00000017723	-	100	90.935	ENSPPAG00000030078	SFPQ	50	90.598	Pan_paniscus
ENSFDAG00000017723	-	100	90.678	ENSPPRG00000015478	-	100	90.341	Panthera_pardus
ENSFDAG00000017723	-	100	90.935	ENSPTIG00000007710	-	100	90.598	Panthera_tigris_altaica
ENSFDAG00000017723	-	100	90.935	ENSPANG00000005380	SFPQ	52	89.744	Papio_anubis
ENSFDAG00000017723	-	100	68.839	ENSPKIG00000023035	sfpq	59	69.101	Paramormyrops_kingsleyae
ENSFDAG00000017723	-	100	85.552	ENSPSIG00000011494	SFPQ	81	84.330	Pelodiscus_sinensis
ENSFDAG00000017723	-	100	90.652	ENSPEMG00000009794	Sfpq	72	90.313	Peromyscus_maniculatus_bairdii
ENSFDAG00000017723	-	53	75.978	ENSPMAG00000005583	sfpq	51	66.390	Petromyzon_marinus
ENSFDAG00000017723	-	100	87.535	ENSPCIG00000000923	SFPQ	50	86.610	Phascolarctos_cinereus
ENSFDAG00000017723	-	100	59.322	ENSPFOG00000003127	sfpq	57	57.865	Poecilia_formosa
ENSFDAG00000017723	-	100	90.935	ENSPPYG00000001560	SFPQ	50	90.598	Pongo_abelii
ENSFDAG00000017723	-	100	90.935	ENSPCOG00000027127	SFPQ	50	90.598	Propithecus_coquereli
ENSFDAG00000017723	-	100	88.952	ENSPVAG00000001865	SFPQ	50	88.604	Pteropus_vampyrus
ENSFDAG00000017723	-	100	63.380	ENSPNAG00000002128	sfpq	57	63.099	Pygocentrus_nattereri
ENSFDAG00000017723	-	100	90.652	ENSRNOG00000058461	Sfpq	50	90.313	Rattus_norvegicus
ENSFDAG00000017723	-	100	90.935	ENSRBIG00000035286	SFPQ	100	90.598	Rhinopithecus_bieti
ENSFDAG00000017723	-	100	90.935	ENSRROG00000040992	SFPQ	100	90.598	Rhinopithecus_roxellana
ENSFDAG00000017723	-	100	90.935	ENSSBOG00000024972	-	100	90.598	Saimiri_boliviensis_boliviensis
ENSFDAG00000017723	-	97	71.212	ENSSBOG00000033925	-	99	70.213	Saimiri_boliviensis_boliviensis
ENSFDAG00000017723	-	100	84.615	ENSSHAG00000012312	-	100	82.808	Sarcophilus_harrisii
ENSFDAG00000017723	-	100	81.671	ENSSHAG00000016107	-	79	79.675	Sarcophilus_harrisii
ENSFDAG00000017723	-	100	69.122	ENSSFOG00015009289	sfpq	63	69.122	Scleropages_formosus
ENSFDAG00000017723	-	100	67.422	ENSSMAG00000018201	sfpq	52	63.764	Scophthalmus_maximus
ENSFDAG00000017723	-	100	65.909	ENSSDUG00000008402	sfpq	52	67.705	Seriola_dumerili
ENSFDAG00000017723	-	100	65.909	ENSSLDG00000018917	sfpq	52	67.705	Seriola_lalandi_dorsalis
ENSFDAG00000017723	-	100	90.935	ENSSARG00000006409	SFPQ	95	90.598	Sorex_araneus
ENSFDAG00000017723	-	100	67.139	ENSSPAG00000016550	sfpq	50	65.439	Stegastes_partitus
ENSFDAG00000017723	-	100	90.935	ENSSSCG00000035690	SFPQ	50	90.598	Sus_scrofa
ENSFDAG00000017723	-	100	85.836	ENSTGUG00000001722	SFPQ	81	84.615	Taeniopygia_guttata
ENSFDAG00000017723	-	100	68.182	ENSTRUG00000003783	sfpq	50	66.006	Takifugu_rubripes
ENSFDAG00000017723	-	100	66.856	ENSTNIG00000011331	sfpq	57	65.722	Tetraodon_nigroviridis
ENSFDAG00000017723	-	100	86.119	ENSTTRG00000013930	SFPQ	50	85.755	Tursiops_truncatus
ENSFDAG00000017723	-	65	99.160	ENSUAMG00000026758	SFPQ	53	99.160	Ursus_americanus
ENSFDAG00000017723	-	100	88.102	ENSUMAG00000008056	-	100	87.749	Ursus_maritimus
ENSFDAG00000017723	-	100	79.887	ENSVVUG00000000874	-	100	79.487	Vulpes_vulpes
ENSFDAG00000017723	-	100	74.095	ENSXETG00000009682	sfpq	95	74.510	Xenopus_tropicalis