EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000017780 (Gene tree)
Gene ID: 104851440
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 35249 bases
Position: chrKN124353.1:10028951-10064199
Accession: 104851440
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000009860	RRM_1	PF00076.22	2.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000022801	SCAF4-201	3432	XM_010608621	ENSFDAP00000009860	1143 (aa)	XP_010606923	-

Gene Model

Click here to download ENSFDAG00000017780's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000017780's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000017780	SCAF4	100	89.569	ENSG00000156304	SCAF4	99	89.741	Homo_sapiens
ENSFDAG00000017780	SCAF4	74	89.647	ENSAMEG00000014987	SCAF4	97	90.728	Ailuropoda_melanoleuca
ENSFDAG00000017780	SCAF4	100	72.938	ENSAPLG00000002509	SCAF4	62	78.541	Anas_platyrhynchos
ENSFDAG00000017780	SCAF4	95	65.786	ENSACAG00000002569	SCAF4	50	82.456	Anolis_carolinensis
ENSFDAG00000017780	SCAF4	100	89.492	ENSANAG00000037494	SCAF4	99	89.147	Aotus_nancymaae
ENSFDAG00000017780	SCAF4	93	47.869	ENSAMXG00000008585	scaf4a	60	58.746	Astyanax_mexicanus
ENSFDAG00000017780	SCAF4	100	87.651	ENSBTAG00000018855	SCAF4	99	88.083	Bos_taurus
ENSFDAG00000017780	SCAF4	100	89.510	ENSCJAG00000008993	SCAF4	99	89.252	Callithrix_jacchus
ENSFDAG00000017780	SCAF4	100	89.542	ENSCAFG00000008863	SCAF4	99	89.369	Canis_familiaris
ENSFDAG00000017780	SCAF4	100	87.381	ENSCAFG00020026019	SCAF4	100	88.150	Canis_lupus_dingo
ENSFDAG00000017780	SCAF4	100	87.166	ENSCHIG00000008385	SCAF4	99	87.414	Capra_hircus
ENSFDAG00000017780	SCAF4	92	89.712	ENSTSYG00000011344	SCAF4	98	89.605	Carlito_syrichta
ENSFDAG00000017780	SCAF4	100	90.941	ENSCPOG00000012443	SCAF4	99	90.854	Cavia_porcellus
ENSFDAG00000017780	SCAF4	100	89.560	ENSCCAG00000033727	SCAF4	99	89.646	Cebus_capucinus
ENSFDAG00000017780	SCAF4	100	88.498	ENSCATG00000030379	SCAF4	100	88.927	Cercocebus_atys
ENSFDAG00000017780	SCAF4	100	90.034	ENSCLAG00000006298	SCAF4	100	90.034	Chinchilla_lanigera
ENSFDAG00000017780	SCAF4	100	89.080	ENSCSAG00000009438	SCAF4	99	89.338	Chlorocebus_sabaeus
ENSFDAG00000017780	SCAF4	100	89.129	ENSCANG00000029847	SCAF4	99	89.387	Colobus_angolensis_palliatus
ENSFDAG00000017780	SCAF4	100	83.572	ENSCGRG00001020821	Scaf4	99	83.909	Cricetulus_griseus_chok1gshd
ENSFDAG00000017780	SCAF4	100	82.096	ENSCGRG00000014360	Scaf4	100	82.426	Cricetulus_griseus_crigri
ENSFDAG00000017780	SCAF4	55	57.422	ENSCSEG00000012808	-	56	64.641	Cynoglossus_semilaevis
ENSFDAG00000017780	SCAF4	100	85.986	ENSDNOG00000019014	SCAF4	93	85.900	Dasypus_novemcinctus
ENSFDAG00000017780	SCAF4	91	86.517	ENSETEG00000000583	SCAF4	99	75.336	Echinops_telfairi
ENSFDAG00000017780	SCAF4	100	89.888	ENSEASG00005007756	SCAF4	99	89.888	Equus_asinus_asinus
ENSFDAG00000017780	SCAF4	100	89.888	ENSECAG00000014248	SCAF4	99	89.974	Equus_caballus
ENSFDAG00000017780	SCAF4	57	50.526	ENSELUG00000002779	SCAF8	59	68.841	Esox_lucius
ENSFDAG00000017780	SCAF4	100	88.870	ENSFCAG00000002228	SCAF4	99	89.042	Felis_catus
ENSFDAG00000017780	SCAF4	100	73.797	ENSGALG00000033965	SCAF4	62	78.121	Gallus_gallus
ENSFDAG00000017780	SCAF4	91	85.804	ENSGGOG00000015557	SCAF4	99	87.370	Gorilla_gorilla
ENSFDAG00000017780	SCAF4	100	92.028	ENSHGLG00000010582	SCAF4	99	92.114	Heterocephalus_glaber_female
ENSFDAG00000017780	SCAF4	100	91.003	ENSHGLG00100009441	SCAF4	100	91.088	Heterocephalus_glaber_male
ENSFDAG00000017780	SCAF4	100	85.527	ENSSTOG00000004450	SCAF4	100	85.702	Ictidomys_tridecemlineatus
ENSFDAG00000017780	SCAF4	100	87.651	ENSJJAG00000019447	Scaf4	99	87.824	Jaculus_jaculus
ENSFDAG00000017780	SCAF4	98	59.538	ENSLACG00000013913	SCAF4	59	65.522	Latimeria_chalumnae
ENSFDAG00000017780	SCAF4	95	54.506	ENSLOCG00000009162	scaf4a	58	64.254	Lepisosteus_oculatus
ENSFDAG00000017780	SCAF4	100	93.597	ENSLAFG00000010710	SCAF4	94	93.597	Loxodonta_africana
ENSFDAG00000017780	SCAF4	100	88.699	ENSMFAG00000037668	SCAF4	99	88.442	Macaca_fascicularis
ENSFDAG00000017780	SCAF4	100	88.613	ENSMMUG00000001712	SCAF4	99	88.356	Macaca_mulatta
ENSFDAG00000017780	SCAF4	100	88.879	ENSMNEG00000032966	SCAF4	99	88.281	Macaca_nemestrina
ENSFDAG00000017780	SCAF4	100	89.022	ENSMLEG00000039674	SCAF4	99	88.937	Mandrillus_leucophaeus
ENSFDAG00000017780	SCAF4	100	73.883	ENSMGAG00000014515	SCAF4	62	78.431	Meleagris_gallopavo
ENSFDAG00000017780	SCAF4	100	85.566	ENSMAUG00000013307	Scaf4	100	85.480	Mesocricetus_auratus
ENSFDAG00000017780	SCAF4	100	89.888	ENSMICG00000005256	SCAF4	99	89.974	Microcebus_murinus
ENSFDAG00000017780	SCAF4	98	92.063	ENSMOCG00000012087	Scaf4	99	84.706	Microtus_ochrogaster
ENSFDAG00000017780	SCAF4	100	80.345	ENSMODG00000021040	SCAF4	99	79.741	Monodelphis_domestica
ENSFDAG00000017780	SCAF4	100	89.859	MGP_CAROLIEiJ_G0020944	Scaf4	99	83.347	Mus_caroli
ENSFDAG00000017780	SCAF4	100	90.194	ENSMUSG00000022983	Scaf4	99	83.876	Mus_musculus
ENSFDAG00000017780	SCAF4	100	82.382	MGP_PahariEiJ_G0016649	Scaf4	99	82.864	Mus_pahari
ENSFDAG00000017780	SCAF4	100	83.005	MGP_SPRETEiJ_G0021850	Scaf4	99	84.171	Mus_spretus
ENSFDAG00000017780	SCAF4	100	88.402	ENSMPUG00000001078	SCAF4	99	88.230	Mustela_putorius_furo
ENSFDAG00000017780	SCAF4	99	74.792	ENSMLUG00000011472	SCAF4	77	80.173	Myotis_lucifugus
ENSFDAG00000017780	SCAF4	100	88.725	ENSNGAG00000005214	Scaf4	99	88.725	Nannospalax_galili
ENSFDAG00000017780	SCAF4	100	89.655	ENSNLEG00000003569	SCAF4	99	89.828	Nomascus_leucogenys
ENSFDAG00000017780	SCAF4	79	90.761	ENSOPRG00000007016	SCAF4	77	90.761	Ochotona_princeps
ENSFDAG00000017780	SCAF4	100	92.261	ENSODEG00000002718	SCAF4	99	92.261	Octodon_degus
ENSFDAG00000017780	SCAF4	100	85.150	ENSOCUG00000008336	SCAF4	99	85.322	Oryctolagus_cuniculus
ENSFDAG00000017780	SCAF4	100	82.548	ENSOGAG00000014653	SCAF4	99	82.878	Otolemur_garnettii
ENSFDAG00000017780	SCAF4	100	87.091	ENSOARG00000013894	SCAF4	98	87.425	Ovis_aries
ENSFDAG00000017780	SCAF4	100	89.569	ENSPPAG00000028535	SCAF4	99	89.741	Pan_paniscus
ENSFDAG00000017780	SCAF4	100	89.369	ENSPPRG00000000635	SCAF4	99	89.455	Panthera_pardus
ENSFDAG00000017780	SCAF4	100	86.690	ENSPTIG00000021578	SCAF4	99	84.668	Panthera_tigris_altaica
ENSFDAG00000017780	SCAF4	100	89.569	ENSPTRG00000013848	SCAF4	99	89.741	Pan_troglodytes
ENSFDAG00000017780	SCAF4	100	88.784	ENSPANG00000017332	SCAF4	99	88.870	Papio_anubis
ENSFDAG00000017780	SCAF4	64	59.274	ENSPKIG00000022408	scaf4a	88	61.877	Paramormyrops_kingsleyae
ENSFDAG00000017780	SCAF4	100	74.052	ENSPSIG00000014242	SCAF4	61	78.903	Pelodiscus_sinensis
ENSFDAG00000017780	SCAF4	62	80.919	ENSPCIG00000028183	SCAF4	91	77.941	Phascolarctos_cinereus
ENSFDAG00000017780	SCAF4	100	89.406	ENSPPYG00000011355	SCAF4	100	89.578	Pongo_abelii
ENSFDAG00000017780	SCAF4	100	89.252	ENSPCOG00000018710	SCAF4	99	89.166	Propithecus_coquereli
ENSFDAG00000017780	SCAF4	100	87.727	ENSPVAG00000005220	SCAF4	99	87.727	Pteropus_vampyrus
ENSFDAG00000017780	SCAF4	76	54.961	ENSPNAG00000016892	scaf4a	59	59.677	Pygocentrus_nattereri
ENSFDAG00000017780	SCAF4	98	80.800	ENSRNOG00000002104	Scaf4	99	78.978	Rattus_norvegicus
ENSFDAG00000017780	SCAF4	100	87.522	ENSRBIG00000040007	SCAF4	61	94.064	Rhinopithecus_bieti
ENSFDAG00000017780	SCAF4	100	89.896	ENSRROG00000029488	SCAF4	99	89.896	Rhinopithecus_roxellana
ENSFDAG00000017780	SCAF4	100	80.311	ENSSHAG00000001581	SCAF4	99	79.620	Sarcophilus_harrisii
ENSFDAG00000017780	SCAF4	67	50.918	ENSSFOG00015006338	scaf4a	54	53.345	Scleropages_formosus
ENSFDAG00000017780	SCAF4	63	59.363	ENSSMAG00000003738	scaf4b	52	71.429	Scophthalmus_maximus
ENSFDAG00000017780	SCAF4	61	61.961	ENSSDUG00000012380	scaf4b	50	78.417	Seriola_dumerili
ENSFDAG00000017780	SCAF4	61	61.961	ENSSLDG00000023152	-	50	78.417	Seriola_lalandi_dorsalis
ENSFDAG00000017780	SCAF4	100	85.090	ENSSARG00000009994	SCAF4	99	84.833	Sorex_araneus
ENSFDAG00000017780	SCAF4	100	85.274	ENSSSCG00000021023	SCAF4	99	85.360	Sus_scrofa
ENSFDAG00000017780	SCAF4	75	73.123	ENSTGUG00000013464	SCAF4	65	74.040	Taeniopygia_guttata
ENSFDAG00000017780	SCAF4	100	87.900	ENSTTRG00000010963	SCAF4	99	87.900	Tursiops_truncatus
ENSFDAG00000017780	SCAF4	100	87.035	ENSUAMG00000008860	SCAF4	99	86.776	Ursus_americanus
ENSFDAG00000017780	SCAF4	100	86.517	ENSUMAG00000016962	SCAF4	100	87.381	Ursus_maritimus
ENSFDAG00000017780	SCAF4	100	89.542	ENSVVUG00000002953	SCAF4	100	89.369	Vulpes_vulpes
ENSFDAG00000017780	SCAF4	99	55.008	ENSXETG00000007351	scaf4	62	62.500	Xenopus_tropicalis