EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000017844 (Gene tree)
Gene ID: 104871387
Gene Symbol: SREK1
Alias: DKFZp564B176|SFRS12|SRrp508|SRrp86
Full Name: splicing regulatory glutamic acid and lysine rich protein 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 36544 bases
Position: chrKN122864.1:4142187-4178730
Accession: 104871387
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000009960	RRM_1	PF00076.22	2.8e-22	1	2
ENSFDAP00000009960	RRM_1	PF00076.22	2.8e-22	2	2
ENSFDAP00000009948	RRM_1	PF00076.22	2.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000022874	SREK1-201	2477	XM_010637260	ENSFDAP00000009948	512 (aa)	XP_019064997	-
ENSFDAT00000022893	SREK1-202	1854	XM_010637265	ENSFDAP00000009960	617 (aa)	XP_010635567	-

Gene Model

Click here to download ENSFDAG00000017844's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000017844's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000017844	SREK1	100	95.117	ENSG00000153914	SREK1	100	100.000	Homo_sapiens
ENSFDAG00000017844	SREK1	100	93.359	ENSAMEG00000011327	SREK1	98	93.019	Ailuropoda_melanoleuca
ENSFDAG00000017844	SREK1	51	66.409	ENSATEG00000009450	srek1	50	75.743	Anabas_testudineus
ENSFDAG00000017844	SREK1	58	89.859	ENSAPLG00000003948	-	84	90.616	Anas_platyrhynchos
ENSFDAG00000017844	SREK1	100	95.720	ENSANAG00000031358	SREK1	98	96.939	Aotus_nancymaae
ENSFDAG00000017844	SREK1	100	92.636	ENSBTAG00000007321	SREK1	98	97.959	Bos_taurus
ENSFDAG00000017844	SREK1	100	96.109	ENSCJAG00000015950	SREK1	100	96.109	Callithrix_jacchus
ENSFDAG00000017844	SREK1	100	95.703	ENSCAFG00000007560	SREK1	100	95.508	Canis_familiaris
ENSFDAG00000017844	SREK1	100	95.331	ENSTSYG00000036957	SREK1	98	100.000	Carlito_syrichta
ENSFDAG00000017844	SREK1	100	95.914	ENSCCAG00000020591	SREK1	100	95.914	Cebus_capucinus
ENSFDAG00000017844	SREK1	100	94.942	ENSCATG00000031482	SREK1	98	98.980	Cercocebus_atys
ENSFDAG00000017844	SREK1	100	97.070	ENSCLAG00000005024	SREK1	100	97.070	Chinchilla_lanigera
ENSFDAG00000017844	SREK1	65	89.286	ENSCHOG00000004956	SREK1	60	88.673	Choloepus_hoffmanni
ENSFDAG00000017844	SREK1	50	92.557	ENSCPBG00000026866	SREK1	87	94.198	Chrysemys_picta_bellii
ENSFDAG00000017844	SREK1	100	94.747	ENSCANG00000030421	SREK1	98	98.980	Colobus_angolensis_palliatus
ENSFDAG00000017844	SREK1	97	89.867	ENSCGRG00001015222	-	97	90.033	Cricetulus_griseus_chok1gshd
ENSFDAG00000017844	SREK1	97	89.867	ENSCGRG00000002130	-	97	90.033	Cricetulus_griseus_crigri
ENSFDAG00000017844	SREK1	100	93.945	ENSDNOG00000010327	SREK1	98	92.997	Dasypus_novemcinctus
ENSFDAG00000017844	SREK1	67	96.047	ENSETEG00000012977	SREK1	77	85.979	Echinops_telfairi
ENSFDAG00000017844	SREK1	100	95.703	ENSFCAG00000040658	-	100	95.508	Felis_catus
ENSFDAG00000017844	SREK1	71	91.444	ENSGAGG00000006087	SREK1	96	93.255	Gopherus_agassizii
ENSFDAG00000017844	SREK1	100	94.553	ENSGGOG00000004737	SREK1	98	98.980	Gorilla_gorilla
ENSFDAG00000017844	SREK1	100	97.852	ENSHGLG00000001181	SREK1	100	97.852	Heterocephalus_glaber_female
ENSFDAG00000017844	SREK1	100	95.117	ENSHGLG00100003207	SREK1	100	95.898	Heterocephalus_glaber_male
ENSFDAG00000017844	SREK1	94	51.884	ENSIPUG00000016851	srek1	54	79.715	Ictalurus_punctatus
ENSFDAG00000017844	SREK1	100	97.407	ENSSTOG00000008850	SREK1	100	97.407	Ictidomys_tridecemlineatus
ENSFDAG00000017844	SREK1	98	94.518	ENSLAFG00000013853	SREK1	98	93.355	Loxodonta_africana
ENSFDAG00000017844	SREK1	100	94.942	ENSMFAG00000039823	SREK1	98	98.980	Macaca_fascicularis
ENSFDAG00000017844	SREK1	100	94.942	ENSMMUG00000014586	SREK1	100	93.164	Macaca_mulatta
ENSFDAG00000017844	SREK1	100	94.942	ENSMNEG00000030723	SREK1	98	98.980	Macaca_nemestrina
ENSFDAG00000017844	SREK1	100	94.747	ENSMLEG00000039078	SREK1	98	98.980	Mandrillus_leucophaeus
ENSFDAG00000017844	SREK1	97	89.867	ENSMAUG00000010066	-	97	90.033	Mesocricetus_auratus
ENSFDAG00000017844	SREK1	100	96.304	ENSMICG00000034959	SREK1	98	98.980	Microcebus_murinus
ENSFDAG00000017844	SREK1	96	90.909	ENSMOCG00000001536	-	97	89.562	Microtus_ochrogaster
ENSFDAG00000017844	SREK1	97	82.862	ENSMODG00000019665	SREK1	98	82.645	Monodelphis_domestica
ENSFDAG00000017844	SREK1	71	59.649	ENSMALG00000017086	srek1	91	88.889	Monopterus_albus
ENSFDAG00000017844	SREK1	100	95.117	ENSMPUG00000014736	SREK1	98	92.671	Mustela_putorius_furo
ENSFDAG00000017844	SREK1	100	93.217	ENSMLUG00000014801	SREK1	100	93.411	Myotis_lucifugus
ENSFDAG00000017844	SREK1	100	95.331	ENSNLEG00000003827	SREK1	98	98.980	Nomascus_leucogenys
ENSFDAG00000017844	SREK1	88	89.319	ENSOPRG00000012111	SREK1	96	88.376	Ochotona_princeps
ENSFDAG00000017844	SREK1	97	95.010	ENSODEG00000016450	SREK1	100	95.010	Octodon_degus
ENSFDAG00000017844	SREK1	75	83.298	ENSOANG00000005029	SREK1	90	84.870	Ornithorhynchus_anatinus
ENSFDAG00000017844	SREK1	98	92.447	ENSOCUG00000001319	SREK1	97	92.599	Oryctolagus_cuniculus
ENSFDAG00000017844	SREK1	100	93.555	ENSOGAG00000016463	SREK1	100	93.359	Otolemur_garnettii
ENSFDAG00000017844	SREK1	100	91.473	ENSOARG00000006005	SREK1	98	91.613	Ovis_aries
ENSFDAG00000017844	SREK1	100	86.381	ENSPPAG00000031605	SREK1	92	100.000	Pan_paniscus
ENSFDAG00000017844	SREK1	100	92.773	ENSPPRG00000024617	SREK1	100	92.773	Panthera_pardus
ENSFDAG00000017844	SREK1	100	95.117	ENSPTIG00000006608	SREK1	98	93.648	Panthera_tigris_altaica
ENSFDAG00000017844	SREK1	100	94.747	ENSPTRG00000016936	SREK1	98	98.980	Pan_troglodytes
ENSFDAG00000017844	SREK1	100	94.942	ENSPANG00000008953	SREK1	98	98.980	Papio_anubis
ENSFDAG00000017844	SREK1	97	87.542	ENSPEMG00000024051	-	97	89.369	Peromyscus_maniculatus_bairdii
ENSFDAG00000017844	SREK1	100	95.331	ENSPPYG00000015515	SREK1	98	92.834	Pongo_abelii
ENSFDAG00000017844	SREK1	96	89.613	ENSPCAG00000004955	SREK1	100	86.135	Procavia_capensis
ENSFDAG00000017844	SREK1	100	95.720	ENSPCOG00000026230	SREK1	98	100.000	Propithecus_coquereli
ENSFDAG00000017844	SREK1	100	94.358	ENSPVAG00000009763	SREK1	98	90.615	Pteropus_vampyrus
ENSFDAG00000017844	SREK1	76	58.990	ENSPNAG00000004328	srek1	57	82.867	Pygocentrus_nattereri
ENSFDAG00000017844	SREK1	98	89.203	ENSRBIG00000033818	SREK1	98	98.980	Rhinopithecus_bieti
ENSFDAG00000017844	SREK1	100	94.942	ENSRROG00000017210	SREK1	98	98.980	Rhinopithecus_roxellana
ENSFDAG00000017844	SREK1	100	96.304	ENSSBOG00000031230	SREK1	100	96.304	Saimiri_boliviensis_boliviensis
ENSFDAG00000017844	SREK1	100	80.507	ENSSHAG00000003514	SREK1	100	82.341	Sarcophilus_harrisii
ENSFDAG00000017844	SREK1	63	73.232	ENSSFOG00015004995	srek1	67	65.239	Scleropages_formosus
ENSFDAG00000017844	SREK1	71	55.280	ENSSMAG00000011808	srek1	58	80.851	Scophthalmus_maximus
ENSFDAG00000017844	SREK1	76	96.512	ENSSARG00000000795	SREK1	70	96.369	Sorex_araneus
ENSFDAG00000017844	SREK1	100	95.922	ENSSSCG00000032726	SREK1	100	95.922	Sus_scrofa
ENSFDAG00000017844	SREK1	100	70.849	ENSTGUG00000002935	SREK1	54	91.241	Taeniopygia_guttata
ENSFDAG00000017844	SREK1	65	65.432	ENSTNIG00000013463	srek1	68	79.004	Tetraodon_nigroviridis
ENSFDAG00000017844	SREK1	100	95.136	ENSTTRG00000009684	SREK1	100	92.573	Tursiops_truncatus
ENSFDAG00000017844	SREK1	100	92.578	ENSUMAG00000008191	SREK1	98	90.717	Ursus_maritimus
ENSFDAG00000017844	SREK1	100	94.336	ENSVPAG00000008654	SREK1	100	93.391	Vicugna_pacos
ENSFDAG00000017844	SREK1	64	73.253	ENSXETG00000021460	srek1	79	69.393	Xenopus_tropicalis