EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000018412 (Gene tree)
Gene ID: 104866124
Gene Symbol: TRNT1
Alias: CCA1|CGI-47|MtCCA
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 80713 bases
Position: chrKN122379.1:330920-411632
Accession: 104866124
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000010715	PolyA_pol	PF01743.20	4.6e-34	1	1
ENSFDAP00000010724	PolyA_pol	PF01743.20	1.9e-33	1	1
ENSFDAP00000010735	PolyA_pol	PF01743.20	6.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000023580	TRNT1-202	2496	-	ENSFDAP00000010735	134 (aa)	-	-
ENSFDAT00000023570	TRNT1-201	648	-	ENSFDAP00000010715	215 (aa)	-	-
ENSFDAT00000030093	TRNT1-203	2129	XM_010629937	ENSFDAP00000010724	434 (aa)	XP_010628244	A0A091E6R0

Gene Model

Click here to download ENSFDAG00000018412's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000018412's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000018412	TRNT1	99	92.841	ENSG00000072756	TRNT1	99	92.841	Homo_sapiens
ENSFDAG00000018412	TRNT1	82	78.531	ENSAPOG00000013687	trnt1	95	67.160	Acanthochromis_polyacanthus
ENSFDAG00000018412	TRNT1	100	90.299	ENSAMEG00000014520	TRNT1	99	90.575	Ailuropoda_melanoleuca
ENSFDAG00000018412	TRNT1	91	74.490	ENSACIG00000021706	trnt1	99	67.059	Amphilophus_citrinellus
ENSFDAG00000018412	TRNT1	91	73.469	ENSAOCG00000024612	trnt1	99	66.118	Amphiprion_ocellaris
ENSFDAG00000018412	TRNT1	96	59.712	ENSAPEG00000022627	trnt1	97	59.712	Amphiprion_percula
ENSFDAG00000018412	TRNT1	93	70.223	ENSATEG00000008928	trnt1	99	70.223	Anabas_testudineus
ENSFDAG00000018412	TRNT1	89	75.452	ENSAPLG00000004258	TRNT1	96	75.452	Anas_platyrhynchos
ENSFDAG00000018412	TRNT1	99	74.134	ENSACAG00000005657	TRNT1	99	74.134	Anolis_carolinensis
ENSFDAG00000018412	TRNT1	99	91.917	ENSANAG00000024802	TRNT1	99	91.917	Aotus_nancymaae
ENSFDAG00000018412	TRNT1	98	66.588	ENSACLG00000022227	trnt1	99	66.588	Astatotilapia_calliptera
ENSFDAG00000018412	TRNT1	97	67.933	ENSAMXG00000003960	trnt1	97	67.933	Astyanax_mexicanus
ENSFDAG00000018412	TRNT1	99	90.069	ENSBTAG00000019534	TRNT1	99	90.069	Bos_taurus
ENSFDAG00000018412	TRNT1	81	64.205	WBGene00010089	hpo-31	94	44.153	Caenorhabditis_elegans
ENSFDAG00000018412	TRNT1	99	91.917	ENSCJAG00000015466	TRNT1	99	91.917	Callithrix_jacchus
ENSFDAG00000018412	TRNT1	99	89.838	ENSCAFG00000005985	TRNT1	99	89.838	Canis_familiaris
ENSFDAG00000018412	TRNT1	99	89.838	ENSCAFG00020014746	TRNT1	99	89.838	Canis_lupus_dingo
ENSFDAG00000018412	TRNT1	99	90.069	ENSCHIG00000007030	TRNT1	99	90.069	Capra_hircus
ENSFDAG00000018412	TRNT1	99	92.841	ENSTSYG00000013390	TRNT1	99	92.841	Carlito_syrichta
ENSFDAG00000018412	TRNT1	87	76.190	ENSCAPG00000006891	TRNT1	100	76.190	Cavia_aperea
ENSFDAG00000018412	TRNT1	100	93.779	ENSCPOG00000007849	TRNT1	100	93.779	Cavia_porcellus
ENSFDAG00000018412	TRNT1	95	88.916	ENSCCAG00000002919	TRNT1	99	91.000	Cebus_capucinus
ENSFDAG00000018412	TRNT1	100	92.627	ENSCATG00000031985	TRNT1	99	92.627	Cercocebus_atys
ENSFDAG00000018412	TRNT1	100	94.700	ENSCLAG00000005186	TRNT1	100	94.700	Chinchilla_lanigera
ENSFDAG00000018412	TRNT1	99	93.072	ENSCSAG00000011052	TRNT1	99	93.072	Chlorocebus_sabaeus
ENSFDAG00000018412	TRNT1	100	90.299	ENSCHOG00000005712	TRNT1	85	91.584	Choloepus_hoffmanni
ENSFDAG00000018412	TRNT1	94	81.572	ENSCPBG00000017636	TRNT1	93	81.572	Chrysemys_picta_bellii
ENSFDAG00000018412	TRNT1	81	62.069	ENSCING00000007069	-	99	45.255	Ciona_intestinalis
ENSFDAG00000018412	TRNT1	89	58.333	ENSCSAVG00000007494	-	99	44.811	Ciona_savignyi
ENSFDAG00000018412	TRNT1	99	92.610	ENSCANG00000039030	TRNT1	99	92.610	Colobus_angolensis_palliatus
ENSFDAG00000018412	TRNT1	99	91.224	ENSCGRG00001009998	Trnt1	99	91.224	Cricetulus_griseus_chok1gshd
ENSFDAG00000018412	TRNT1	99	91.224	ENSCGRG00000013410	Trnt1	99	91.224	Cricetulus_griseus_crigri
ENSFDAG00000018412	TRNT1	94	68.966	ENSCSEG00000008157	trnt1	95	68.966	Cynoglossus_semilaevis
ENSFDAG00000018412	TRNT1	94	68.227	ENSCVAG00000019770	trnt1	96	68.227	Cyprinodon_variegatus
ENSFDAG00000018412	TRNT1	98	67.599	ENSDARG00000075297	trnt1	99	67.599	Danio_rerio
ENSFDAG00000018412	TRNT1	99	90.762	ENSDNOG00000008837	TRNT1	99	90.762	Dasypus_novemcinctus
ENSFDAG00000018412	TRNT1	99	89.376	ENSDORG00000014035	Trnt1	99	89.376	Dipodomys_ordii
ENSFDAG00000018412	TRNT1	80	67.241	FBgn0037369	CG2100	83	49.010	Drosophila_melanogaster
ENSFDAG00000018412	TRNT1	86	90.270	ENSETEG00000018177	TRNT1	100	88.755	Echinops_telfairi
ENSFDAG00000018412	TRNT1	93	62.035	ENSEBUG00000012779	-	95	62.035	Eptatretus_burgeri
ENSFDAG00000018412	TRNT1	99	91.455	ENSEASG00005003577	TRNT1	99	91.455	Equus_asinus_asinus
ENSFDAG00000018412	TRNT1	99	91.686	ENSECAG00000014420	TRNT1	99	91.686	Equus_caballus
ENSFDAG00000018412	TRNT1	99	88.222	ENSEEUG00000009567	TRNT1	99	88.222	Erinaceus_europaeus
ENSFDAG00000018412	TRNT1	99	68.213	ENSELUG00000003802	trnt1	99	68.213	Esox_lucius
ENSFDAG00000018412	TRNT1	99	90.069	ENSFCAG00000026805	TRNT1	99	90.069	Felis_catus
ENSFDAG00000018412	TRNT1	88	74.479	ENSFALG00000013539	TRNT1	99	74.479	Ficedula_albicollis
ENSFDAG00000018412	TRNT1	87	75.773	ENSFHEG00000019294	trnt1	99	66.667	Fundulus_heteroclitus
ENSFDAG00000018412	TRNT1	93	67.901	ENSGMOG00000007460	trnt1	95	67.901	Gadus_morhua
ENSFDAG00000018412	TRNT1	93	73.333	ENSGALG00000017368	TRNT1	94	73.333	Gallus_gallus
ENSFDAG00000018412	TRNT1	96	66.194	ENSGAFG00000008647	trnt1	99	66.194	Gambusia_affinis
ENSFDAG00000018412	TRNT1	94	67.241	ENSGACG00000011903	trnt1	96	67.801	Gasterosteus_aculeatus
ENSFDAG00000018412	TRNT1	99	78.837	ENSGAGG00000020942	TRNT1	97	78.837	Gopherus_agassizii
ENSFDAG00000018412	TRNT1	99	93.072	ENSGGOG00000015286	TRNT1	99	93.072	Gorilla_gorilla
ENSFDAG00000018412	TRNT1	98	66.588	ENSHBUG00000002797	trnt1	99	66.588	Haplochromis_burtoni
ENSFDAG00000018412	TRNT1	100	89.195	ENSHGLG00000000221	-	100	89.195	Heterocephalus_glaber_female
ENSFDAG00000018412	TRNT1	100	94.700	ENSHGLG00000003649	TRNT1	100	94.700	Heterocephalus_glaber_female
ENSFDAG00000018412	TRNT1	100	93.548	ENSHGLG00100016421	TRNT1	100	93.548	Heterocephalus_glaber_male
ENSFDAG00000018412	TRNT1	82	80.226	ENSHCOG00000010618	trnt1	95	67.734	Hippocampus_comes
ENSFDAG00000018412	TRNT1	99	65.734	ENSIPUG00000000971	trnt1	98	65.734	Ictalurus_punctatus
ENSFDAG00000018412	TRNT1	100	91.791	ENSSTOG00000000150	TRNT1	100	91.304	Ictidomys_tridecemlineatus
ENSFDAG00000018412	TRNT1	100	91.045	ENSJJAG00000018561	Trnt1	99	91.224	Jaculus_jaculus
ENSFDAG00000018412	TRNT1	96	66.745	ENSKMAG00000011307	trnt1	99	66.745	Kryptolebias_marmoratus
ENSFDAG00000018412	TRNT1	91	73.980	ENSLBEG00000019457	trnt1	97	63.415	Labrus_bergylta
ENSFDAG00000018412	TRNT1	99	71.860	ENSLACG00000013227	TRNT1	99	71.860	Latimeria_chalumnae
ENSFDAG00000018412	TRNT1	94	71.253	ENSLOCG00000011105	trnt1	93	71.253	Lepisosteus_oculatus
ENSFDAG00000018412	TRNT1	100	91.791	ENSLAFG00000023191	TRNT1	99	92.610	Loxodonta_africana
ENSFDAG00000018412	TRNT1	100	92.857	ENSMFAG00000045113	TRNT1	99	92.857	Macaca_fascicularis
ENSFDAG00000018412	TRNT1	100	92.857	ENSMMUG00000017983	TRNT1	99	92.857	Macaca_mulatta
ENSFDAG00000018412	TRNT1	100	92.857	ENSMNEG00000037805	TRNT1	99	92.857	Macaca_nemestrina
ENSFDAG00000018412	TRNT1	88	94.241	ENSMLEG00000033671	TRNT1	99	94.241	Mandrillus_leucophaeus
ENSFDAG00000018412	TRNT1	91	75.510	ENSMAMG00000023401	trnt1	99	67.529	Mastacembelus_armatus
ENSFDAG00000018412	TRNT1	98	66.588	ENSMZEG00005009141	trnt1	99	66.588	Maylandia_zebra
ENSFDAG00000018412	TRNT1	74	74.375	ENSMGAG00000009971	TRNT1	99	74.375	Meleagris_gallopavo
ENSFDAG00000018412	TRNT1	99	91.455	ENSMAUG00000020707	Trnt1	99	91.455	Mesocricetus_auratus
ENSFDAG00000018412	TRNT1	99	92.841	ENSMICG00000016615	TRNT1	99	92.841	Microcebus_murinus
ENSFDAG00000018412	TRNT1	99	91.224	ENSMOCG00000004539	Trnt1	99	91.224	Microtus_ochrogaster
ENSFDAG00000018412	TRNT1	94	68.473	ENSMMOG00000010742	trnt1	96	68.473	Mola_mola
ENSFDAG00000018412	TRNT1	100	83.582	ENSMODG00000004368	TRNT1	99	84.065	Monodelphis_domestica
ENSFDAG00000018412	TRNT1	98	65.882	ENSMALG00000008376	trnt1	99	65.882	Monopterus_albus
ENSFDAG00000018412	TRNT1	99	93.240	MGP_CAROLIEiJ_G0028698	Trnt1	99	93.240	Mus_caroli
ENSFDAG00000018412	TRNT1	99	93.240	ENSMUSG00000013736	Trnt1	99	93.240	Mus_musculus
ENSFDAG00000018412	TRNT1	99	91.686	MGP_PahariEiJ_G0022449	Trnt1	100	92.611	Mus_pahari
ENSFDAG00000018412	TRNT1	99	93.240	MGP_SPRETEiJ_G0029726	Trnt1	99	93.240	Mus_spretus
ENSFDAG00000018412	TRNT1	99	91.455	ENSMPUG00000017017	TRNT1	99	91.455	Mustela_putorius_furo
ENSFDAG00000018412	TRNT1	89	87.273	ENSMLUG00000011864	TRNT1	99	87.273	Myotis_lucifugus
ENSFDAG00000018412	TRNT1	100	91.791	ENSNGAG00000000537	Trnt1	99	91.686	Nannospalax_galili
ENSFDAG00000018412	TRNT1	91	73.469	ENSNBRG00000023606	trnt1	99	66.377	Neolamprologus_brichardi
ENSFDAG00000018412	TRNT1	99	93.072	ENSNLEG00000003226	TRNT1	99	93.072	Nomascus_leucogenys
ENSFDAG00000018412	TRNT1	100	82.836	ENSMEUG00000004684	TRNT1	99	83.372	Notamacropus_eugenii
ENSFDAG00000018412	TRNT1	88	79.427	ENSOPRG00000015067	TRNT1	99	79.427	Ochotona_princeps
ENSFDAG00000018412	TRNT1	100	94.700	ENSODEG00000007597	TRNT1	100	94.700	Octodon_degus
ENSFDAG00000018412	TRNT1	98	66.588	ENSONIG00000020273	trnt1	98	66.588	Oreochromis_niloticus
ENSFDAG00000018412	TRNT1	99	74.306	ENSOANG00000007514	TRNT1	99	74.306	Ornithorhynchus_anatinus
ENSFDAG00000018412	TRNT1	100	84.328	ENSOCUG00000008580	TRNT1	99	84.527	Oryctolagus_cuniculus
ENSFDAG00000018412	TRNT1	88	75.263	ENSORLG00000003165	trnt1	99	65.394	Oryzias_latipes
ENSFDAG00000018412	TRNT1	90	71.901	ENSORLG00020022060	trnt1	99	65.632	Oryzias_latipes_hni
ENSFDAG00000018412	TRNT1	96	63.915	ENSORLG00015018915	trnt1	99	63.915	Oryzias_latipes_hsok
ENSFDAG00000018412	TRNT1	85	77.049	ENSOMEG00000003331	trnt1	97	65.049	Oryzias_melastigma
ENSFDAG00000018412	TRNT1	99	89.838	ENSOARG00000008631	TRNT1	99	89.838	Ovis_aries
ENSFDAG00000018412	TRNT1	99	93.072	ENSPPAG00000043566	TRNT1	99	93.072	Pan_paniscus
ENSFDAG00000018412	TRNT1	100	89.552	ENSPPRG00000001327	TRNT1	99	90.531	Panthera_pardus
ENSFDAG00000018412	TRNT1	100	89.552	ENSPTIG00000011448	TRNT1	99	90.531	Panthera_tigris_altaica
ENSFDAG00000018412	TRNT1	99	93.072	ENSPTRG00000014564	TRNT1	99	93.072	Pan_troglodytes
ENSFDAG00000018412	TRNT1	100	92.627	ENSPANG00000025944	TRNT1	99	92.627	Papio_anubis
ENSFDAG00000018412	TRNT1	98	68.531	ENSPKIG00000020015	trnt1	99	68.531	Paramormyrops_kingsleyae
ENSFDAG00000018412	TRNT1	91	79.545	ENSPSIG00000017356	TRNT1	99	81.389	Pelodiscus_sinensis
ENSFDAG00000018412	TRNT1	91	73.980	ENSPMGG00000008888	trnt1	98	66.824	Periophthalmus_magnuspinnatus
ENSFDAG00000018412	TRNT1	99	92.379	ENSPEMG00000019845	Trnt1	99	92.379	Peromyscus_maniculatus_bairdii
ENSFDAG00000018412	TRNT1	100	82.836	ENSPCIG00000030436	TRNT1	99	83.603	Phascolarctos_cinereus
ENSFDAG00000018412	TRNT1	94	67.734	ENSPFOG00000006194	trnt1	95	67.734	Poecilia_formosa
ENSFDAG00000018412	TRNT1	94	67.734	ENSPLAG00000015623	trnt1	99	67.494	Poecilia_latipinna
ENSFDAG00000018412	TRNT1	96	65.957	ENSPMEG00000012216	trnt1	99	67.494	Poecilia_mexicana
ENSFDAG00000018412	TRNT1	96	65.957	ENSPREG00000021470	trnt1	99	65.957	Poecilia_reticulata
ENSFDAG00000018412	TRNT1	99	93.072	ENSPPYG00000013702	TRNT1	99	93.072	Pongo_abelii
ENSFDAG00000018412	TRNT1	88	90.078	ENSPCAG00000001951	TRNT1	100	90.078	Procavia_capensis
ENSFDAG00000018412	TRNT1	100	93.284	ENSPCOG00000022228	TRNT1	99	93.303	Propithecus_coquereli
ENSFDAG00000018412	TRNT1	88	89.817	ENSPVAG00000008784	TRNT1	99	89.817	Pteropus_vampyrus
ENSFDAG00000018412	TRNT1	98	66.588	ENSPNYG00000003120	trnt1	99	66.588	Pundamilia_nyererei
ENSFDAG00000018412	TRNT1	97	67.696	ENSPNAG00000000565	trnt1	97	67.696	Pygocentrus_nattereri
ENSFDAG00000018412	TRNT1	99	92.541	ENSRNOG00000006432	Trnt1	99	92.541	Rattus_norvegicus
ENSFDAG00000018412	TRNT1	100	91.045	ENSRBIG00000042632	TRNT1	99	90.300	Rhinopithecus_bieti
ENSFDAG00000018412	TRNT1	99	92.379	ENSRROG00000036866	TRNT1	99	92.379	Rhinopithecus_roxellana
ENSFDAG00000018412	TRNT1	99	91.917	ENSSBOG00000021208	TRNT1	99	91.917	Saimiri_boliviensis_boliviensis
ENSFDAG00000018412	TRNT1	99	83.141	ENSSHAG00000018861	TRNT1	99	83.141	Sarcophilus_harrisii
ENSFDAG00000018412	TRNT1	93	70.370	ENSSFOG00015020844	trnt1	94	70.370	Scleropages_formosus
ENSFDAG00000018412	TRNT1	98	67.059	ENSSMAG00000015432	trnt1	97	67.059	Scophthalmus_maximus
ENSFDAG00000018412	TRNT1	91	73.469	ENSSDUG00000012320	trnt1	99	66.353	Seriola_dumerili
ENSFDAG00000018412	TRNT1	91	73.469	ENSSLDG00000009325	trnt1	99	66.353	Seriola_lalandi_dorsalis
ENSFDAG00000018412	TRNT1	56	63.900	ENSSLDG00000016463	-	91	64.017	Seriola_lalandi_dorsalis
ENSFDAG00000018412	TRNT1	88	81.201	ENSSPUG00000014153	TRNT1	99	81.201	Sphenodon_punctatus
ENSFDAG00000018412	TRNT1	91	73.980	ENSSPAG00000021005	trnt1	99	66.118	Stegastes_partitus
ENSFDAG00000018412	TRNT1	99	91.455	ENSSSCG00000011529	TRNT1	99	91.455	Sus_scrofa
ENSFDAG00000018412	TRNT1	93	74.321	ENSTGUG00000010192	TRNT1	99	74.321	Taeniopygia_guttata
ENSFDAG00000018412	TRNT1	98	66.824	ENSTRUG00000001088	trnt1	99	66.824	Takifugu_rubripes
ENSFDAG00000018412	TRNT1	94	68.719	ENSTNIG00000007363	trnt1	94	68.719	Tetraodon_nigroviridis
ENSFDAG00000018412	TRNT1	100	88.806	ENSTBEG00000006367	TRNT1	100	76.404	Tupaia_belangeri
ENSFDAG00000018412	TRNT1	99	90.762	ENSTTRG00000007803	TRNT1	99	90.762	Tursiops_truncatus
ENSFDAG00000018412	TRNT1	99	90.069	ENSUAMG00000022574	TRNT1	99	90.069	Ursus_americanus
ENSFDAG00000018412	TRNT1	99	90.531	ENSUMAG00000024092	TRNT1	99	90.531	Ursus_maritimus
ENSFDAG00000018412	TRNT1	99	90.069	ENSVVUG00000012810	TRNT1	99	90.069	Vulpes_vulpes
ENSFDAG00000018412	TRNT1	95	64.663	ENSXETG00000025091	trnt1	99	65.672	Xenopus_tropicalis
ENSFDAG00000018412	TRNT1	96	66.194	ENSXCOG00000010150	trnt1	99	66.194	Xiphophorus_couchianus
ENSFDAG00000018412	TRNT1	96	65.721	ENSXMAG00000002227	trnt1	99	65.721	Xiphophorus_maculatus