EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000018461 (Gene tree)
Gene ID: 104871417
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 26854 bases
Position: chrKN122864.1:8444004-8470857
Accession: 104871417
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000010789	MRP-S27	PF10037.9	4.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000023635	PTCD2-201	2606	XM_010637326	ENSFDAP00000010789	383 (aa)	XP_010635628	UPI000540321E

Gene Model

Click here to download ENSFDAG00000018461's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000018461's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000018461	PTCD2	100	77.807	ENSG00000049883	PTCD2	100	80.296	Homo_sapiens
ENSFDAG00000018461	PTCD2	93	45.352	ENSAPOG00000020682	ptcd2	93	45.352	Acanthochromis_polyacanthus
ENSFDAG00000018461	PTCD2	100	73.629	ENSAMEG00000007194	PTCD2	99	73.629	Ailuropoda_melanoleuca
ENSFDAG00000018461	PTCD2	90	40.974	ENSACIG00000002053	ptcd2	100	40.974	Amphilophus_citrinellus
ENSFDAG00000018461	PTCD2	91	45.115	ENSAOCG00000006616	ptcd2	89	45.115	Amphiprion_ocellaris
ENSFDAG00000018461	PTCD2	91	45.115	ENSAPEG00000022926	ptcd2	89	45.115	Amphiprion_percula
ENSFDAG00000018461	PTCD2	97	56.836	ENSACAG00000009747	PTCD2	94	56.836	Anolis_carolinensis
ENSFDAG00000018461	PTCD2	100	76.501	ENSANAG00000029353	PTCD2	99	76.501	Aotus_nancymaae
ENSFDAG00000018461	PTCD2	96	42.623	ENSACLG00000027742	ptcd2	92	42.623	Astatotilapia_calliptera
ENSFDAG00000018461	PTCD2	89	41.935	ENSAMXG00000029404	ptcd2	91	41.935	Astyanax_mexicanus
ENSFDAG00000018461	PTCD2	100	75.521	ENSBTAG00000014675	PTCD2	100	75.521	Bos_taurus
ENSFDAG00000018461	PTCD2	100	75.457	ENSCJAG00000016364	PTCD2	99	75.457	Callithrix_jacchus
ENSFDAG00000018461	PTCD2	100	71.802	ENSCAFG00000007982	PTCD2	90	71.802	Canis_familiaris
ENSFDAG00000018461	PTCD2	90	74.855	ENSCAFG00020019147	PTCD2	97	74.855	Canis_lupus_dingo
ENSFDAG00000018461	PTCD2	100	76.302	ENSCHIG00000017118	PTCD2	100	76.302	Capra_hircus
ENSFDAG00000018461	PTCD2	100	78.068	ENSCPOG00000040168	PTCD2	100	78.068	Cavia_porcellus
ENSFDAG00000018461	PTCD2	100	75.718	ENSCCAG00000029389	-	99	75.718	Cebus_capucinus
ENSFDAG00000018461	PTCD2	80	74.267	ENSCCAG00000021996	-	95	74.267	Cebus_capucinus
ENSFDAG00000018461	PTCD2	100	77.546	ENSCATG00000019069	PTCD2	100	77.546	Cercocebus_atys
ENSFDAG00000018461	PTCD2	100	80.418	ENSCLAG00000000072	PTCD2	100	80.418	Chinchilla_lanigera
ENSFDAG00000018461	PTCD2	100	78.068	ENSCSAG00000015623	PTCD2	100	78.068	Chlorocebus_sabaeus
ENSFDAG00000018461	PTCD2	90	57.471	ENSCHOG00000010634	PTCD2	100	57.471	Choloepus_hoffmanni
ENSFDAG00000018461	PTCD2	94	54.875	ENSCPBG00000000216	PTCD2	92	54.875	Chrysemys_picta_bellii
ENSFDAG00000018461	PTCD2	100	77.807	ENSCANG00000035636	PTCD2	99	77.807	Colobus_angolensis_palliatus
ENSFDAG00000018461	PTCD2	100	71.279	ENSCGRG00001015289	Ptcd2	84	71.279	Cricetulus_griseus_chok1gshd
ENSFDAG00000018461	PTCD2	100	71.279	ENSCGRG00000006193	Ptcd2	84	71.279	Cricetulus_griseus_crigri
ENSFDAG00000018461	PTCD2	93	43.380	ENSCVAG00000001285	ptcd2	91	43.380	Cyprinodon_variegatus
ENSFDAG00000018461	PTCD2	92	45.480	ENSDARG00000035391	ptcd2	92	45.480	Danio_rerio
ENSFDAG00000018461	PTCD2	98	70.496	ENSDNOG00000008719	PTCD2	100	70.496	Dasypus_novemcinctus
ENSFDAG00000018461	PTCD2	100	74.677	ENSDORG00000004921	Ptcd2	100	74.677	Dipodomys_ordii
ENSFDAG00000018461	PTCD2	100	64.583	ENSETEG00000016542	PTCD2	99	64.583	Echinops_telfairi
ENSFDAG00000018461	PTCD2	100	74.151	ENSEASG00005018038	PTCD2	100	74.151	Equus_asinus_asinus
ENSFDAG00000018461	PTCD2	100	74.935	ENSECAG00000007022	PTCD2	98	74.935	Equus_caballus
ENSFDAG00000018461	PTCD2	100	68.407	ENSEEUG00000014031	PTCD2	99	68.407	Erinaceus_europaeus
ENSFDAG00000018461	PTCD2	92	47.740	ENSELUG00000003584	ptcd2	92	47.740	Esox_lucius
ENSFDAG00000018461	PTCD2	95	69.337	ENSFCAG00000045432	PTCD2	78	69.337	Felis_catus
ENSFDAG00000018461	PTCD2	85	50.153	ENSFALG00000010299	PTCD2	99	50.153	Ficedula_albicollis
ENSFDAG00000018461	PTCD2	91	48.148	ENSGMOG00000003637	ptcd2	91	48.148	Gadus_morhua
ENSFDAG00000018461	PTCD2	92	47.592	ENSGALG00000038260	PTCD2	93	47.592	Gallus_gallus
ENSFDAG00000018461	PTCD2	94	57.939	ENSGAGG00000021952	PTCD2	92	57.939	Gopherus_agassizii
ENSFDAG00000018461	PTCD2	100	77.546	ENSGGOG00000010695	PTCD2	99	77.546	Gorilla_gorilla
ENSFDAG00000018461	PTCD2	96	42.350	ENSHBUG00000009191	ptcd2	92	42.350	Haplochromis_burtoni
ENSFDAG00000018461	PTCD2	100	83.290	ENSHGLG00000001234	PTCD2	100	83.290	Heterocephalus_glaber_female
ENSFDAG00000018461	PTCD2	100	83.290	ENSHGLG00100015419	PTCD2	100	83.290	Heterocephalus_glaber_male
ENSFDAG00000018461	PTCD2	93	46.348	ENSHCOG00000001703	ptcd2	92	46.348	Hippocampus_comes
ENSFDAG00000018461	PTCD2	91	43.840	ENSIPUG00000006080	ptcd2	95	44.110	Ictalurus_punctatus
ENSFDAG00000018461	PTCD2	99	76.440	ENSSTOG00000006596	PTCD2	99	76.440	Ictidomys_tridecemlineatus
ENSFDAG00000018461	PTCD2	100	74.413	ENSJJAG00000024388	Ptcd2	100	74.413	Jaculus_jaculus
ENSFDAG00000018461	PTCD2	91	43.840	ENSKMAG00000009329	ptcd2	91	43.840	Kryptolebias_marmoratus
ENSFDAG00000018461	PTCD2	90	45.087	ENSLBEG00000024871	ptcd2	88	45.087	Labrus_bergylta
ENSFDAG00000018461	PTCD2	92	53.672	ENSLOCG00000011122	ptcd2	92	53.672	Lepisosteus_oculatus
ENSFDAG00000018461	PTCD2	81	74.277	ENSLAFG00000004115	PTCD2	100	74.277	Loxodonta_africana
ENSFDAG00000018461	PTCD2	100	78.590	ENSMFAG00000031516	PTCD2	99	78.590	Macaca_fascicularis
ENSFDAG00000018461	PTCD2	100	78.851	ENSMNEG00000007537	PTCD2	100	78.851	Macaca_nemestrina
ENSFDAG00000018461	PTCD2	100	77.807	ENSMLEG00000031093	PTCD2	99	77.807	Mandrillus_leucophaeus
ENSFDAG00000018461	PTCD2	97	45.946	ENSMAMG00000018529	ptcd2	96	45.946	Mastacembelus_armatus
ENSFDAG00000018461	PTCD2	96	42.623	ENSMZEG00005003625	ptcd2	92	42.623	Maylandia_zebra
ENSFDAG00000018461	PTCD2	91	48.276	ENSMGAG00000005033	PTCD2	100	48.276	Meleagris_gallopavo
ENSFDAG00000018461	PTCD2	100	55.352	ENSMAUG00000020253	Ptcd2	100	55.352	Mesocricetus_auratus
ENSFDAG00000018461	PTCD2	100	75.196	ENSMICG00000004535	PTCD2	99	75.196	Microcebus_murinus
ENSFDAG00000018461	PTCD2	100	72.324	ENSMOCG00000019985	Ptcd2	100	72.324	Microtus_ochrogaster
ENSFDAG00000018461	PTCD2	93	60.563	ENSMODG00000001695	PTCD2	92	60.563	Monodelphis_domestica
ENSFDAG00000018461	PTCD2	94	46.814	ENSMALG00000022372	ptcd2	92	46.814	Monopterus_albus
ENSFDAG00000018461	PTCD2	100	71.540	MGP_CAROLIEiJ_G0018829	Ptcd2	100	71.540	Mus_caroli
ENSFDAG00000018461	PTCD2	100	70.496	ENSMUSG00000021650	Ptcd2	100	70.496	Mus_musculus
ENSFDAG00000018461	PTCD2	100	73.368	MGP_PahariEiJ_G0015904	Ptcd2	100	73.368	Mus_pahari
ENSFDAG00000018461	PTCD2	100	70.757	MGP_SPRETEiJ_G0019711	Ptcd2	100	70.757	Mus_spretus
ENSFDAG00000018461	PTCD2	100	74.674	ENSMPUG00000014401	PTCD2	100	74.674	Mustela_putorius_furo
ENSFDAG00000018461	PTCD2	100	72.324	ENSMLUG00000007374	PTCD2	99	72.324	Myotis_lucifugus
ENSFDAG00000018461	PTCD2	100	70.496	ENSNGAG00000005027	Ptcd2	100	70.496	Nannospalax_galili
ENSFDAG00000018461	PTCD2	96	42.896	ENSNBRG00000008174	ptcd2	94	42.896	Neolamprologus_brichardi
ENSFDAG00000018461	PTCD2	86	43.333	ENSNBRG00000000092	-	100	43.333	Neolamprologus_brichardi
ENSFDAG00000018461	PTCD2	100	77.285	ENSNLEG00000004516	PTCD2	99	77.285	Nomascus_leucogenys
ENSFDAG00000018461	PTCD2	82	52.077	ENSMEUG00000014012	-	82	52.077	Notamacropus_eugenii
ENSFDAG00000018461	PTCD2	100	68.930	ENSOPRG00000007290	PTCD2	99	68.930	Ochotona_princeps
ENSFDAG00000018461	PTCD2	100	79.896	ENSODEG00000016417	PTCD2	100	79.896	Octodon_degus
ENSFDAG00000018461	PTCD2	80	43.322	ENSONIG00000011269	ptcd2	88	43.322	Oreochromis_niloticus
ENSFDAG00000018461	PTCD2	93	76.816	ENSOCUG00000007970	PTCD2	100	73.368	Oryctolagus_cuniculus
ENSFDAG00000018461	PTCD2	90	44.798	ENSORLG00000003851	ptcd2	88	44.798	Oryzias_latipes
ENSFDAG00000018461	PTCD2	90	44.220	ENSORLG00020009823	ptcd2	90	44.220	Oryzias_latipes_hni
ENSFDAG00000018461	PTCD2	90	43.931	ENSORLG00015016777	ptcd2	99	43.931	Oryzias_latipes_hsok
ENSFDAG00000018461	PTCD2	90	43.642	ENSOMEG00000012396	ptcd2	84	43.642	Oryzias_melastigma
ENSFDAG00000018461	PTCD2	100	71.540	ENSOGAG00000008390	PTCD2	99	71.540	Otolemur_garnettii
ENSFDAG00000018461	PTCD2	100	76.042	ENSOARG00000005087	PTCD2	99	76.042	Ovis_aries
ENSFDAG00000018461	PTCD2	100	77.546	ENSPPAG00000028480	PTCD2	99	77.546	Pan_paniscus
ENSFDAG00000018461	PTCD2	100	77.546	ENSPTRG00000016968	PTCD2	99	77.546	Pan_troglodytes
ENSFDAG00000018461	PTCD2	90	82.029	ENSPANG00000006611	PTCD2	89	82.029	Papio_anubis
ENSFDAG00000018461	PTCD2	92	47.740	ENSPKIG00000019896	ptcd2	92	47.740	Paramormyrops_kingsleyae
ENSFDAG00000018461	PTCD2	83	58.675	ENSPSIG00000014559	PTCD2	98	58.675	Pelodiscus_sinensis
ENSFDAG00000018461	PTCD2	100	71.429	ENSPEMG00000000884	Ptcd2	100	71.429	Peromyscus_maniculatus_bairdii
ENSFDAG00000018461	PTCD2	93	61.173	ENSPCIG00000029047	PTCD2	93	61.173	Phascolarctos_cinereus
ENSFDAG00000018461	PTCD2	87	43.713	ENSPLAG00000010456	ptcd2	92	42.936	Poecilia_latipinna
ENSFDAG00000018461	PTCD2	93	42.817	ENSPREG00000021797	ptcd2	90	42.817	Poecilia_reticulata
ENSFDAG00000018461	PTCD2	100	67.102	ENSPPYG00000015543	PTCD2	99	67.102	Pongo_abelii
ENSFDAG00000018461	PTCD2	80	64.013	ENSPCAG00000006806	PTCD2	100	64.013	Procavia_capensis
ENSFDAG00000018461	PTCD2	100	72.846	ENSPVAG00000010935	PTCD2	99	72.846	Pteropus_vampyrus
ENSFDAG00000018461	PTCD2	96	42.623	ENSPNYG00000003122	ptcd2	92	42.623	Pundamilia_nyererei
ENSFDAG00000018461	PTCD2	91	47.429	ENSPNAG00000021490	ptcd2	91	47.429	Pygocentrus_nattereri
ENSFDAG00000018461	PTCD2	100	73.107	ENSRNOG00000028403	Ptcd2	100	73.107	Rattus_norvegicus
ENSFDAG00000018461	PTCD2	100	72.846	ENSRBIG00000032929	PTCD2	99	72.846	Rhinopithecus_bieti
ENSFDAG00000018461	PTCD2	100	77.285	ENSRROG00000000080	PTCD2	100	77.285	Rhinopithecus_roxellana
ENSFDAG00000018461	PTCD2	100	74.151	ENSSBOG00000018911	PTCD2	100	74.151	Saimiri_boliviensis_boliviensis
ENSFDAG00000018461	PTCD2	93	60.615	ENSSHAG00000003833	PTCD2	93	60.615	Sarcophilus_harrisii
ENSFDAG00000018461	PTCD2	93	45.352	ENSSFOG00015015415	ptcd2	92	45.352	Scleropages_formosus
ENSFDAG00000018461	PTCD2	96	43.052	ENSSMAG00000010350	ptcd2	94	43.052	Scophthalmus_maximus
ENSFDAG00000018461	PTCD2	97	45.676	ENSSDUG00000008142	ptcd2	91	45.676	Seriola_dumerili
ENSFDAG00000018461	PTCD2	97	45.946	ENSSLDG00000015284	ptcd2	96	45.946	Seriola_lalandi_dorsalis
ENSFDAG00000018461	PTCD2	81	65.372	ENSSARG00000004983	PTCD2	99	65.372	Sorex_araneus
ENSFDAG00000018461	PTCD2	94	54.039	ENSSPUG00000000176	PTCD2	90	54.039	Sphenodon_punctatus
ENSFDAG00000018461	PTCD2	93	44.789	ENSSPAG00000008591	ptcd2	91	44.789	Stegastes_partitus
ENSFDAG00000018461	PTCD2	100	75.457	ENSSSCG00000016975	PTCD2	90	75.457	Sus_scrofa
ENSFDAG00000018461	PTCD2	90	50.289	ENSTGUG00000005705	PTCD2	100	50.289	Taeniopygia_guttata
ENSFDAG00000018461	PTCD2	100	73.368	ENSTBEG00000016559	PTCD2	99	73.368	Tupaia_belangeri
ENSFDAG00000018461	PTCD2	100	75.065	ENSTTRG00000011851	PTCD2	99	75.065	Tursiops_truncatus
ENSFDAG00000018461	PTCD2	100	73.629	ENSUAMG00000007583	PTCD2	90	73.629	Ursus_americanus
ENSFDAG00000018461	PTCD2	100	73.368	ENSUMAG00000007666	PTCD2	100	73.368	Ursus_maritimus
ENSFDAG00000018461	PTCD2	99	72.751	ENSVPAG00000009597	PTCD2	100	72.751	Vicugna_pacos
ENSFDAG00000018461	PTCD2	100	71.802	ENSVVUG00000007299	-	100	71.802	Vulpes_vulpes
ENSFDAG00000018461	PTCD2	94	53.333	ENSXETG00000031652	PTCD2	94	53.333	Xenopus_tropicalis
ENSFDAG00000018461	PTCD2	86	43.598	ENSXMAG00000005940	ptcd2	84	42.535	Xiphophorus_maculatus