EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000018560 (Gene tree)
Gene ID: 104853285
Gene Symbol: YTHDC1
Alias: KIAA1966|YT521|YT521-B
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 29297 bases
Position: chrKN124734.1:281425-310721
Accession: 104853285
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000010884	YTH	PF04146.15	7.7e-40	1	1
ENSFDAP00000010892	YTH	PF04146.15	8e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000023720	YTHDC1-201	3433	XM_010611192	ENSFDAP00000010892	715 (aa)	XP_010609494	-
ENSFDAT00000030123	YTHDC1-202	2091	-	ENSFDAP00000010884	697 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000018560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000018560's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000018560	YTHDC1	100	97.768	ENSG00000083896	YTHDC1	99	97.768	Homo_sapiens
ENSFDAG00000018560	YTHDC1	58	59.759	ENSAPOG00000013997	ythdc1	57	62.768	Acanthochromis_polyacanthus
ENSFDAG00000018560	YTHDC1	100	96.671	ENSAMEG00000005688	YTHDC1	99	96.671	Ailuropoda_melanoleuca
ENSFDAG00000018560	YTHDC1	65	67.925	ENSACIG00000019728	ythdc1	78	60.048	Amphilophus_citrinellus
ENSFDAG00000018560	YTHDC1	58	61.468	ENSAOCG00000000239	ythdc1	59	67.464	Amphiprion_ocellaris
ENSFDAG00000018560	YTHDC1	50	65.840	ENSAPEG00000000618	ythdc1	53	69.231	Amphiprion_percula
ENSFDAG00000018560	YTHDC1	92	84.894	ENSAPLG00000009921	YTHDC1	92	86.556	Anas_platyrhynchos
ENSFDAG00000018560	YTHDC1	92	84.290	ENSACAG00000009697	YTHDC1	91	84.290	Anolis_carolinensis
ENSFDAG00000018560	YTHDC1	100	97.493	ENSANAG00000001522	YTHDC1	99	97.493	Aotus_nancymaae
ENSFDAG00000018560	YTHDC1	58	59.633	ENSACLG00000019371	ythdc1	59	66.133	Astatotilapia_calliptera
ENSFDAG00000018560	YTHDC1	92	65.060	ENSAMXG00000006978	ythdc1	91	65.685	Astyanax_mexicanus
ENSFDAG00000018560	YTHDC1	100	96.245	ENSBTAG00000015572	YTHDC1	99	96.245	Bos_taurus
ENSFDAG00000018560	YTHDC1	100	97.772	ENSCJAG00000009934	YTHDC1	99	97.772	Callithrix_jacchus
ENSFDAG00000018560	YTHDC1	100	96.394	ENSCAFG00000002821	YTHDC1	99	96.394	Canis_familiaris
ENSFDAG00000018560	YTHDC1	100	96.394	ENSCAFG00020027112	YTHDC1	99	96.394	Canis_lupus_dingo
ENSFDAG00000018560	YTHDC1	92	88.685	ENSCHIG00000004810	YTHDC1	95	93.870	Capra_hircus
ENSFDAG00000018560	YTHDC1	100	97.908	ENSTSYG00000011668	YTHDC1	99	97.908	Carlito_syrichta
ENSFDAG00000018560	YTHDC1	91	71.205	ENSCAPG00000008722	YTHDC1	99	73.157	Cavia_aperea
ENSFDAG00000018560	YTHDC1	100	91.771	ENSCPOG00000010929	YTHDC1	99	91.771	Cavia_porcellus
ENSFDAG00000018560	YTHDC1	100	98.184	ENSCCAG00000035754	YTHDC1	99	98.184	Cebus_capucinus
ENSFDAG00000018560	YTHDC1	100	97.714	ENSCATG00000036320	YTHDC1	99	97.714	Cercocebus_atys
ENSFDAG00000018560	YTHDC1	100	98.854	ENSCLAG00000005482	YTHDC1	99	98.854	Chinchilla_lanigera
ENSFDAG00000018560	YTHDC1	100	97.632	ENSCSAG00000005252	YTHDC1	99	97.632	Chlorocebus_sabaeus
ENSFDAG00000018560	YTHDC1	92	87.311	ENSCPBG00000021965	YTHDC1	94	87.461	Chrysemys_picta_bellii
ENSFDAG00000018560	YTHDC1	100	97.772	ENSCANG00000004769	YTHDC1	99	97.772	Colobus_angolensis_palliatus
ENSFDAG00000018560	YTHDC1	100	95.310	ENSCGRG00001000816	Ythdc1	99	95.310	Cricetulus_griseus_chok1gshd
ENSFDAG00000018560	YTHDC1	100	93.863	ENSCGRG00000009807	Ythdc1	99	93.863	Cricetulus_griseus_crigri
ENSFDAG00000018560	YTHDC1	58	60.714	ENSCSEG00000020404	ythdc1	59	66.427	Cynoglossus_semilaevis
ENSFDAG00000018560	YTHDC1	58	60.000	ENSCVAG00000022349	ythdc1	59	65.301	Cyprinodon_variegatus
ENSFDAG00000018560	YTHDC1	92	64.329	ENSDARG00000051953	ythdc1	91	64.497	Danio_rerio
ENSFDAG00000018560	YTHDC1	100	96.508	ENSDNOG00000004949	YTHDC1	99	96.508	Dasypus_novemcinctus
ENSFDAG00000018560	YTHDC1	100	97.357	ENSDORG00000013045	Ythdc1	100	97.357	Dipodomys_ordii
ENSFDAG00000018560	YTHDC1	78	100.000	ENSETEG00000001878	YTHDC1	68	100.000	Echinops_telfairi
ENSFDAG00000018560	YTHDC1	100	96.810	ENSEASG00005018383	YTHDC1	100	96.618	Equus_asinus_asinus
ENSFDAG00000018560	YTHDC1	100	96.394	ENSECAG00000018303	YTHDC1	100	96.176	Equus_caballus
ENSFDAG00000018560	YTHDC1	100	95.967	ENSEEUG00000015466	YTHDC1	99	95.967	Erinaceus_europaeus
ENSFDAG00000018560	YTHDC1	92	62.815	ENSELUG00000014029	ythdc1	93	63.636	Esox_lucius
ENSFDAG00000018560	YTHDC1	100	96.667	ENSFCAG00000026791	YTHDC1	99	96.667	Felis_catus
ENSFDAG00000018560	YTHDC1	68	89.220	ENSFALG00000006581	YTHDC1	85	93.431	Ficedula_albicollis
ENSFDAG00000018560	YTHDC1	65	67.925	ENSFHEG00000001286	ythdc1	60	56.024	Fundulus_heteroclitus
ENSFDAG00000018560	YTHDC1	65	63.830	ENSGMOG00000018815	ythdc1	78	63.830	Gadus_morhua
ENSFDAG00000018560	YTHDC1	92	86.254	ENSGALG00000035906	YTHDC1	85	86.405	Gallus_gallus
ENSFDAG00000018560	YTHDC1	58	62.383	ENSGACG00000015486	ythdc1	57	62.439	Gasterosteus_aculeatus
ENSFDAG00000018560	YTHDC1	92	86.957	ENSGAGG00000007108	YTHDC1	91	87.112	Gopherus_agassizii
ENSFDAG00000018560	YTHDC1	100	97.571	ENSGGOG00000021958	YTHDC1	99	97.571	Gorilla_gorilla
ENSFDAG00000018560	YTHDC1	58	59.633	ENSHBUG00000019288	ythdc1	59	66.133	Haplochromis_burtoni
ENSFDAG00000018560	YTHDC1	100	99.426	ENSHGLG00000006319	-	99	99.426	Heterocephalus_glaber_female
ENSFDAG00000018560	YTHDC1	95	73.451	ENSHGLG00000003239	-	85	75.340	Heterocephalus_glaber_female
ENSFDAG00000018560	YTHDC1	100	98.470	ENSHGLG00100001556	-	99	98.470	Heterocephalus_glaber_male
ENSFDAG00000018560	YTHDC1	95	71.953	ENSHGLG00100008060	-	86	73.795	Heterocephalus_glaber_male
ENSFDAG00000018560	YTHDC1	54	67.568	ENSHCOG00000001520	ythdc1	82	67.568	Hippocampus_comes
ENSFDAG00000018560	YTHDC1	92	68.148	ENSIPUG00000018136	ythdc1	91	68.095	Ictalurus_punctatus
ENSFDAG00000018560	YTHDC1	100	96.419	ENSSTOG00000013652	YTHDC1	99	96.419	Ictidomys_tridecemlineatus
ENSFDAG00000018560	YTHDC1	92	91.757	ENSJJAG00000010268	Ythdc1	92	93.002	Jaculus_jaculus
ENSFDAG00000018560	YTHDC1	58	60.502	ENSKMAG00000006483	ythdc1	85	65.306	Kryptolebias_marmoratus
ENSFDAG00000018560	YTHDC1	66	60.970	ENSLBEG00000020831	ythdc1	71	73.529	Labrus_bergylta
ENSFDAG00000018560	YTHDC1	88	74.331	ENSLACG00000004893	YTHDC1	92	74.448	Latimeria_chalumnae
ENSFDAG00000018560	YTHDC1	92	73.494	ENSLOCG00000003045	ythdc1	90	88.221	Lepisosteus_oculatus
ENSFDAG00000018560	YTHDC1	100	95.574	ENSLAFG00000021592	YTHDC1	99	95.574	Loxodonta_africana
ENSFDAG00000018560	YTHDC1	100	97.714	ENSMFAG00000031927	YTHDC1	99	97.714	Macaca_fascicularis
ENSFDAG00000018560	YTHDC1	100	97.772	ENSMMUG00000002265	YTHDC1	99	97.772	Macaca_mulatta
ENSFDAG00000018560	YTHDC1	100	97.772	ENSMNEG00000033751	YTHDC1	99	97.772	Macaca_nemestrina
ENSFDAG00000018560	YTHDC1	100	97.772	ENSMLEG00000042147	YTHDC1	99	97.772	Mandrillus_leucophaeus
ENSFDAG00000018560	YTHDC1	56	61.871	ENSMAMG00000013122	ythdc1	58	66.587	Mastacembelus_armatus
ENSFDAG00000018560	YTHDC1	58	59.633	ENSMZEG00005023173	ythdc1	59	66.133	Maylandia_zebra
ENSFDAG00000018560	YTHDC1	92	84.441	ENSMGAG00000010391	YTHDC1	91	86.254	Meleagris_gallopavo
ENSFDAG00000018560	YTHDC1	92	95.349	ENSMAUG00000001286	Ythdc1	92	93.145	Mesocricetus_auratus
ENSFDAG00000018560	YTHDC1	100	97.343	ENSMICG00000034640	YTHDC1	99	96.266	Microcebus_murinus
ENSFDAG00000018560	YTHDC1	100	96.700	ENSMOCG00000020201	Ythdc1	99	96.700	Microtus_ochrogaster
ENSFDAG00000018560	YTHDC1	92	89.561	ENSMODG00000020754	-	91	88.351	Monodelphis_domestica
ENSFDAG00000018560	YTHDC1	96	50.789	ENSMODG00000010076	-	60	61.538	Monodelphis_domestica
ENSFDAG00000018560	YTHDC1	66	57.872	ENSMODG00000009173	-	88	61.594	Monodelphis_domestica
ENSFDAG00000018560	YTHDC1	87	69.021	ENSMODG00000014337	-	94	69.343	Monodelphis_domestica
ENSFDAG00000018560	YTHDC1	51	67.385	ENSMALG00000013412	ythdc1	56	69.341	Monopterus_albus
ENSFDAG00000018560	YTHDC1	92	94.428	MGP_CAROLIEiJ_G0027347	Ythdc1	93	93.143	Mus_caroli
ENSFDAG00000018560	YTHDC1	100	95.828	ENSMUSG00000035851	Ythdc1	99	95.828	Mus_musculus
ENSFDAG00000018560	YTHDC1	100	95.967	MGP_PahariEiJ_G0017126	Ythdc1	99	95.967	Mus_pahari
ENSFDAG00000018560	YTHDC1	100	96.106	MGP_SPRETEiJ_G0028339	Ythdc1	99	96.106	Mus_spretus
ENSFDAG00000018560	YTHDC1	92	72.945	ENSMPUG00000001743	YTHDC1	53	98.172	Mustela_putorius_furo
ENSFDAG00000018560	YTHDC1	100	96.783	ENSMLUG00000016300	YTHDC1	100	96.783	Myotis_lucifugus
ENSFDAG00000018560	YTHDC1	60	91.211	ENSNGAG00000024000	Ythdc1	93	91.686	Nannospalax_galili
ENSFDAG00000018560	YTHDC1	58	60.422	ENSNBRG00000007663	ythdc1	70	66.355	Neolamprologus_brichardi
ENSFDAG00000018560	YTHDC1	100	95.868	ENSNLEG00000009202	YTHDC1	99	95.868	Nomascus_leucogenys
ENSFDAG00000018560	YTHDC1	83	81.271	ENSMEUG00000007128	YTHDC1	81	81.271	Notamacropus_eugenii
ENSFDAG00000018560	YTHDC1	76	98.300	ENSOPRG00000008986	YTHDC1	74	98.300	Ochotona_princeps
ENSFDAG00000018560	YTHDC1	100	98.462	ENSODEG00000001715	YTHDC1	99	98.462	Octodon_degus
ENSFDAG00000018560	YTHDC1	92	49.926	ENSONIG00000012651	ythdc1	58	69.176	Oreochromis_niloticus
ENSFDAG00000018560	YTHDC1	90	75.229	ENSOANG00000014398	YTHDC1	55	94.937	Ornithorhynchus_anatinus
ENSFDAG00000018560	YTHDC1	93	81.381	ENSOCUG00000015886	YTHDC1	57	95.226	Oryctolagus_cuniculus
ENSFDAG00000018560	YTHDC1	92	52.711	ENSORLG00000030544	ythdc1	60	66.747	Oryzias_latipes
ENSFDAG00000018560	YTHDC1	92	52.932	ENSORLG00020019316	ythdc1	60	66.747	Oryzias_latipes_hni
ENSFDAG00000018560	YTHDC1	57	61.520	ENSOMEG00000000551	ythdc1	93	55.673	Oryzias_melastigma
ENSFDAG00000018560	YTHDC1	100	96.513	ENSOGAG00000003362	YTHDC1	99	96.513	Otolemur_garnettii
ENSFDAG00000018560	YTHDC1	100	96.245	ENSOARG00000008633	YTHDC1	99	96.245	Ovis_aries
ENSFDAG00000018560	YTHDC1	100	97.711	ENSPPAG00000041315	YTHDC1	99	97.711	Pan_paniscus
ENSFDAG00000018560	YTHDC1	100	96.581	ENSPPRG00000011979	YTHDC1	99	96.581	Panthera_pardus
ENSFDAG00000018560	YTHDC1	100	96.296	ENSPTIG00000015527	YTHDC1	100	96.296	Panthera_tigris_altaica
ENSFDAG00000018560	YTHDC1	100	97.711	ENSPTRG00000016105	YTHDC1	99	97.711	Pan_troglodytes
ENSFDAG00000018560	YTHDC1	100	97.714	ENSPANG00000021590	YTHDC1	99	97.714	Papio_anubis
ENSFDAG00000018560	YTHDC1	92	69.139	ENSPKIG00000018497	ythdc1	91	68.935	Paramormyrops_kingsleyae
ENSFDAG00000018560	YTHDC1	92	86.707	ENSPSIG00000002782	YTHDC1	92	86.858	Pelodiscus_sinensis
ENSFDAG00000018560	YTHDC1	100	96.653	ENSPEMG00000013850	Ythdc1	100	96.653	Peromyscus_maniculatus_bairdii
ENSFDAG00000018560	YTHDC1	92	89.410	ENSPCIG00000006870	YTHDC1	91	88.200	Phascolarctos_cinereus
ENSFDAG00000018560	YTHDC1	58	59.318	ENSPFOG00000013404	ythdc1	60	65.144	Poecilia_formosa
ENSFDAG00000018560	YTHDC1	58	59.318	ENSPLAG00000011079	ythdc1	85	64.663	Poecilia_latipinna
ENSFDAG00000018560	YTHDC1	58	59.318	ENSPMEG00000009238	ythdc1	60	65.144	Poecilia_mexicana
ENSFDAG00000018560	YTHDC1	70	58.894	ENSPREG00000016973	ythdc1	59	59.799	Poecilia_reticulata
ENSFDAG00000018560	YTHDC1	88	98.101	ENSPPYG00000014726	YTHDC1	100	98.101	Pongo_abelii
ENSFDAG00000018560	YTHDC1	77	92.727	ENSPCAG00000009607	YTHDC1	75	88.636	Procavia_capensis
ENSFDAG00000018560	YTHDC1	100	92.539	ENSPCOG00000019105	YTHDC1	99	92.539	Propithecus_coquereli
ENSFDAG00000018560	YTHDC1	92	91.754	ENSPVAG00000015551	YTHDC1	91	92.354	Pteropus_vampyrus
ENSFDAG00000018560	YTHDC1	58	59.633	ENSPNYG00000011687	ythdc1	59	66.133	Pundamilia_nyererei
ENSFDAG00000018560	YTHDC1	92	70.015	ENSPNAG00000028365	ythdc1	91	69.956	Pygocentrus_nattereri
ENSFDAG00000018560	YTHDC1	92	93.037	ENSRNOG00000001996	Ythdc1	91	93.185	Rattus_norvegicus
ENSFDAG00000018560	YTHDC1	100	95.592	ENSRBIG00000028279	YTHDC1	99	95.592	Rhinopithecus_bieti
ENSFDAG00000018560	YTHDC1	100	97.772	ENSRROG00000035028	YTHDC1	99	97.772	Rhinopithecus_roxellana
ENSFDAG00000018560	YTHDC1	100	97.714	ENSSBOG00000022353	YTHDC1	99	97.714	Saimiri_boliviensis_boliviensis
ENSFDAG00000018560	YTHDC1	92	89.561	ENSSHAG00000002538	YTHDC1	91	88.351	Sarcophilus_harrisii
ENSFDAG00000018560	YTHDC1	92	68.593	ENSSFOG00015003298	ythdc1	60	85.545	Scleropages_formosus
ENSFDAG00000018560	YTHDC1	57	59.513	ENSSMAG00000009086	ythdc1	60	65.707	Scophthalmus_maximus
ENSFDAG00000018560	YTHDC1	56	61.017	ENSSDUG00000022008	ythdc1	92	57.481	Seriola_dumerili
ENSFDAG00000018560	YTHDC1	56	61.017	ENSSLDG00000007926	ythdc1	59	67.048	Seriola_lalandi_dorsalis
ENSFDAG00000018560	YTHDC1	80	97.578	ENSSARG00000010960	YTHDC1	100	97.578	Sorex_araneus
ENSFDAG00000018560	YTHDC1	92	82.556	ENSSPUG00000009357	YTHDC1	93	83.670	Sphenodon_punctatus
ENSFDAG00000018560	YTHDC1	58	62.156	ENSSPAG00000011449	ythdc1	59	67.464	Stegastes_partitus
ENSFDAG00000018560	YTHDC1	100	95.574	ENSSSCG00000035505	YTHDC1	100	94.203	Sus_scrofa
ENSFDAG00000018560	YTHDC1	92	86.254	ENSTGUG00000004452	-	91	86.405	Taeniopygia_guttata
ENSFDAG00000018560	YTHDC1	63	69.231	ENSTRUG00000010142	ythdc1	69	71.053	Takifugu_rubripes
ENSFDAG00000018560	YTHDC1	88	60.823	ENSTNIG00000013243	ythdc1	88	65.967	Tetraodon_nigroviridis
ENSFDAG00000018560	YTHDC1	92	87.538	ENSTBEG00000011546	YTHDC1	91	88.602	Tupaia_belangeri
ENSFDAG00000018560	YTHDC1	92	93.393	ENSTTRG00000005083	YTHDC1	91	93.844	Tursiops_truncatus
ENSFDAG00000018560	YTHDC1	94	96.613	ENSUAMG00000010388	YTHDC1	100	96.613	Ursus_americanus
ENSFDAG00000018560	YTHDC1	100	83.495	ENSUMAG00000013668	YTHDC1	98	83.495	Ursus_maritimus
ENSFDAG00000018560	YTHDC1	100	96.991	ENSVPAG00000009040	YTHDC1	99	96.991	Vicugna_pacos
ENSFDAG00000018560	YTHDC1	100	95.473	ENSVVUG00000005387	YTHDC1	100	96.324	Vulpes_vulpes
ENSFDAG00000018560	YTHDC1	92	73.913	ENSXETG00000017960	ythdc1	91	74.063	Xenopus_tropicalis
ENSFDAG00000018560	YTHDC1	58	59.318	ENSXMAG00000005196	ythdc1	61	64.679	Xiphophorus_maculatus