EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000018599 (Gene tree)
Gene ID: 104867763
Gene Symbol: TRNAU1AP
Alias: FLJ20503|SECP43|TRSPAP1
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 18485 bases
Position: chrKN120745.1:940271-958755
Accession: 104867763
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000010970	RRM_1	PF00076.22	1.6e-27	1	2
ENSFDAP00000010970	RRM_1	PF00076.22	1.6e-27	2	2
ENSFDAP00000010959	RRM_1	PF00076.22	7.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000023781	TRNAU1AP-201	1665	XM_010632221	ENSFDAP00000010959	247 (aa)	XP_010630523	UPI00053F2AD1
ENSFDAT00000023786	TRNAU1AP-202	1769	XM_010632216	ENSFDAP00000010970	287 (aa)	XP_010630518	A0A091E2W8

Gene Model

Click here to download ENSFDAG00000018599's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000018599's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000018599	TRNAU1AP	78	30.198	ENSFDAG00000014427	-	69	31.285
ENSFDAG00000018599	TRNAU1AP	60	34.586	ENSFDAG00000003933	TIAL1	68	32.386

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000018599	TRNAU1AP	100	98.606	ENSG00000180098	TRNAU1AP	100	98.606	Homo_sapiens
ENSFDAG00000018599	TRNAU1AP	99	58.170	ENSAPOG00000007148	TRNAU1AP	99	58.170	Acanthochromis_polyacanthus
ENSFDAG00000018599	TRNAU1AP	100	97.561	ENSAMEG00000011367	TRNAU1AP	100	97.561	Ailuropoda_melanoleuca
ENSFDAG00000018599	TRNAU1AP	91	70.115	ENSACIG00000004161	trnau1apa	93	70.115	Amphilophus_citrinellus
ENSFDAG00000018599	TRNAU1AP	99	58.170	ENSAOCG00000008056	trnau1apa	99	58.170	Amphiprion_ocellaris
ENSFDAG00000018599	TRNAU1AP	99	58.170	ENSAPEG00000008868	trnau1apa	99	58.333	Amphiprion_percula
ENSFDAG00000018599	TRNAU1AP	99	57.962	ENSATEG00000012140	trnau1apa	99	56.051	Anabas_testudineus
ENSFDAG00000018599	TRNAU1AP	94	93.333	ENSAPLG00000002606	TRNAU1AP	99	93.333	Anas_platyrhynchos
ENSFDAG00000018599	TRNAU1AP	99	76.224	ENSACAG00000003995	-	99	76.224	Anolis_carolinensis
ENSFDAG00000018599	TRNAU1AP	67	51.295	ENSACAG00000004205	-	74	51.295	Anolis_carolinensis
ENSFDAG00000018599	TRNAU1AP	100	98.606	ENSANAG00000018976	TRNAU1AP	100	98.606	Aotus_nancymaae
ENSFDAG00000018599	TRNAU1AP	99	58.746	ENSACLG00000018515	trnau1apa	99	59.539	Astatotilapia_calliptera
ENSFDAG00000018599	TRNAU1AP	96	57.500	ENSAMXG00000013750	trnau1apa	91	57.500	Astyanax_mexicanus
ENSFDAG00000018599	TRNAU1AP	94	65.556	ENSAMXG00000029240	-	96	65.556	Astyanax_mexicanus
ENSFDAG00000018599	TRNAU1AP	100	98.258	ENSBTAG00000010393	TRNAU1AP	100	98.258	Bos_taurus
ENSFDAG00000018599	TRNAU1AP	100	98.606	ENSCJAG00000009717	TRNAU1AP	100	98.606	Callithrix_jacchus
ENSFDAG00000018599	TRNAU1AP	100	98.955	ENSCAFG00000011735	TRNAU1AP	100	98.955	Canis_familiaris
ENSFDAG00000018599	TRNAU1AP	100	98.955	ENSCAFG00020023584	TRNAU1AP	100	98.955	Canis_lupus_dingo
ENSFDAG00000018599	TRNAU1AP	100	98.785	ENSCHIG00000023215	TRNAU1AP	100	98.785	Capra_hircus
ENSFDAG00000018599	TRNAU1AP	100	98.258	ENSTSYG00000003506	TRNAU1AP	100	98.258	Carlito_syrichta
ENSFDAG00000018599	TRNAU1AP	100	98.606	ENSCPOG00000001925	TRNAU1AP	100	98.606	Cavia_porcellus
ENSFDAG00000018599	TRNAU1AP	100	98.606	ENSCCAG00000037506	TRNAU1AP	100	98.606	Cebus_capucinus
ENSFDAG00000018599	TRNAU1AP	100	98.381	ENSCATG00000044617	TRNAU1AP	100	98.381	Cercocebus_atys
ENSFDAG00000018599	TRNAU1AP	100	98.606	ENSCLAG00000008223	TRNAU1AP	100	98.606	Chinchilla_lanigera
ENSFDAG00000018599	TRNAU1AP	100	98.258	ENSCSAG00000001014	TRNAU1AP	100	98.258	Chlorocebus_sabaeus
ENSFDAG00000018599	TRNAU1AP	95	93.796	ENSCPBG00000000121	TRNAU1AP	100	93.796	Chrysemys_picta_bellii
ENSFDAG00000018599	TRNAU1AP	99	44.681	ENSCSAVG00000011781	-	98	44.681	Ciona_savignyi
ENSFDAG00000018599	TRNAU1AP	100	86.760	ENSCANG00000041949	TRNAU1AP	100	98.305	Colobus_angolensis_palliatus
ENSFDAG00000018599	TRNAU1AP	100	98.258	ENSCGRG00001004713	Trnau1ap	100	98.258	Cricetulus_griseus_chok1gshd
ENSFDAG00000018599	TRNAU1AP	100	98.258	ENSCGRG00000014532	Trnau1ap	100	98.258	Cricetulus_griseus_crigri
ENSFDAG00000018599	TRNAU1AP	98	58.333	ENSCSEG00000006663	trnau1apa	94	58.607	Cynoglossus_semilaevis
ENSFDAG00000018599	TRNAU1AP	97	57.823	ENSCVAG00000018069	trnau1apa	94	59.341	Cyprinodon_variegatus
ENSFDAG00000018599	TRNAU1AP	96	53.357	ENSDARG00000101323	trnau1apa	89	51.761	Danio_rerio
ENSFDAG00000018599	TRNAU1AP	100	98.955	ENSDNOG00000033009	TRNAU1AP	100	98.955	Dasypus_novemcinctus
ENSFDAG00000018599	TRNAU1AP	67	77.083	ENSDNOG00000047959	-	97	77.540	Dasypus_novemcinctus
ENSFDAG00000018599	TRNAU1AP	99	90.909	ENSDORG00000006349	Trnau1ap	100	99.567	Dipodomys_ordii
ENSFDAG00000018599	TRNAU1AP	96	50.746	FBgn0031607	CG15440	51	51.445	Drosophila_melanogaster
ENSFDAG00000018599	TRNAU1AP	85	93.469	ENSETEG00000012594	TRNAU1AP	100	93.469	Echinops_telfairi
ENSFDAG00000018599	TRNAU1AP	55	60.440	ENSEBUG00000006349	-	60	60.440	Eptatretus_burgeri
ENSFDAG00000018599	TRNAU1AP	100	98.606	ENSEASG00005010062	TRNAU1AP	100	98.606	Equus_asinus_asinus
ENSFDAG00000018599	TRNAU1AP	100	98.606	ENSECAG00000012980	TRNAU1AP	100	98.606	Equus_caballus
ENSFDAG00000018599	TRNAU1AP	96	70.526	ENSELUG00000022790	-	94	53.814	Esox_lucius
ENSFDAG00000018599	TRNAU1AP	96	63.415	ENSELUG00000017686	trnau1apa	94	63.066	Esox_lucius
ENSFDAG00000018599	TRNAU1AP	100	98.606	ENSFCAG00000013401	TRNAU1AP	100	98.606	Felis_catus
ENSFDAG00000018599	TRNAU1AP	95	93.431	ENSFALG00000001371	TRNAU1AP	100	93.431	Ficedula_albicollis
ENSFDAG00000018599	TRNAU1AP	79	60.816	ENSFHEG00000018232	trnau1apa	86	56.757	Fundulus_heteroclitus
ENSFDAG00000018599	TRNAU1AP	95	53.846	ENSGMOG00000016508	trnau1apa	93	54.930	Gadus_morhua
ENSFDAG00000018599	TRNAU1AP	100	92.334	ENSGALG00000001310	-	100	92.334	Gallus_gallus
ENSFDAG00000018599	TRNAU1AP	68	49.296	ENSGALG00000012721	C2H6orf52	95	44.788	Gallus_gallus
ENSFDAG00000018599	TRNAU1AP	78	58.403	ENSGAFG00000004928	trnau1apa	90	59.244	Gambusia_affinis
ENSFDAG00000018599	TRNAU1AP	98	60.274	ENSGACG00000001443	trnau1apa	95	59.932	Gasterosteus_aculeatus
ENSFDAG00000018599	TRNAU1AP	95	94.161	ENSGAGG00000004940	TRNAU1AP	100	94.161	Gopherus_agassizii
ENSFDAG00000018599	TRNAU1AP	100	98.606	ENSGGOG00000003511	TRNAU1AP	100	98.606	Gorilla_gorilla
ENSFDAG00000018599	TRNAU1AP	99	57.792	ENSHBUG00000002510	trnau1apa	99	58.576	Haplochromis_burtoni
ENSFDAG00000018599	TRNAU1AP	100	99.303	ENSHGLG00000010380	TRNAU1AP	100	99.303	Heterocephalus_glaber_female
ENSFDAG00000018599	TRNAU1AP	100	96.516	ENSHGLG00100012699	TRNAU1AP	100	96.516	Heterocephalus_glaber_male
ENSFDAG00000018599	TRNAU1AP	98	57.718	ENSHCOG00000014770	trnau1apa	95	66.429	Hippocampus_comes
ENSFDAG00000018599	TRNAU1AP	100	98.606	ENSSTOG00000000079	TRNAU1AP	100	98.606	Ictidomys_tridecemlineatus
ENSFDAG00000018599	TRNAU1AP	100	97.909	ENSJJAG00000010128	Trnau1ap	100	97.909	Jaculus_jaculus
ENSFDAG00000018599	TRNAU1AP	95	60.208	ENSKMAG00000001230	trnau1apa	93	58.478	Kryptolebias_marmoratus
ENSFDAG00000018599	TRNAU1AP	95	60.751	ENSLBEG00000011683	trnau1apa	93	59.864	Labrus_bergylta
ENSFDAG00000018599	TRNAU1AP	99	72.632	ENSLACG00000005541	TRNAU1AP	99	72.632	Latimeria_chalumnae
ENSFDAG00000018599	TRNAU1AP	99	72.378	ENSLOCG00000004041	trnau1apa	99	71.329	Lepisosteus_oculatus
ENSFDAG00000018599	TRNAU1AP	100	98.258	ENSLAFG00000007628	TRNAU1AP	100	98.258	Loxodonta_africana
ENSFDAG00000018599	TRNAU1AP	100	98.258	ENSMFAG00000043751	TRNAU1AP	100	98.258	Macaca_fascicularis
ENSFDAG00000018599	TRNAU1AP	100	98.381	ENSMMUG00000006561	TRNAU1AP	100	98.381	Macaca_mulatta
ENSFDAG00000018599	TRNAU1AP	100	98.381	ENSMNEG00000044201	TRNAU1AP	100	98.381	Macaca_nemestrina
ENSFDAG00000018599	TRNAU1AP	100	98.258	ENSMLEG00000015649	TRNAU1AP	100	98.258	Mandrillus_leucophaeus
ENSFDAG00000018599	TRNAU1AP	99	58.710	ENSMAMG00000001247	trnau1apa	99	58.562	Mastacembelus_armatus
ENSFDAG00000018599	TRNAU1AP	99	58.746	ENSMZEG00005017722	trnau1apa	99	59.539	Maylandia_zebra
ENSFDAG00000018599	TRNAU1AP	97	92.086	ENSMGAG00000002105	TRNAU1AP	100	92.086	Meleagris_gallopavo
ENSFDAG00000018599	TRNAU1AP	100	98.955	ENSMICG00000008386	TRNAU1AP	100	98.955	Microcebus_murinus
ENSFDAG00000018599	TRNAU1AP	100	98.606	ENSMOCG00000011189	Trnau1ap	100	98.606	Microtus_ochrogaster
ENSFDAG00000018599	TRNAU1AP	95	58.088	ENSMMOG00000012107	trnau1apa	92	58.088	Mola_mola
ENSFDAG00000018599	TRNAU1AP	100	94.774	ENSMODG00000010927	TRNAU1AP	100	94.774	Monodelphis_domestica
ENSFDAG00000018599	TRNAU1AP	99	59.223	ENSMALG00000016778	trnau1apa	99	56.634	Monopterus_albus
ENSFDAG00000018599	TRNAU1AP	100	97.571	MGP_CAROLIEiJ_G0026563	Trnau1ap	100	98.913	Mus_caroli
ENSFDAG00000018599	TRNAU1AP	100	97.571	ENSMUSG00000028898	Trnau1ap	100	98.913	Mus_musculus
ENSFDAG00000018599	TRNAU1AP	100	97.976	MGP_PahariEiJ_G0028896	Trnau1ap	100	98.913	Mus_pahari
ENSFDAG00000018599	TRNAU1AP	100	97.976	MGP_SPRETEiJ_G0027544	Trnau1ap	100	98.913	Mus_spretus
ENSFDAG00000018599	TRNAU1AP	100	98.606	ENSMPUG00000015511	TRNAU1AP	100	98.606	Mustela_putorius_furo
ENSFDAG00000018599	TRNAU1AP	100	98.955	ENSMLUG00000012586	TRNAU1AP	100	98.955	Myotis_lucifugus
ENSFDAG00000018599	TRNAU1AP	100	97.213	ENSNGAG00000015881	Trnau1ap	100	97.213	Nannospalax_galili
ENSFDAG00000018599	TRNAU1AP	100	56.757	ENSNBRG00000001758	trnau1apa	99	56.757	Neolamprologus_brichardi
ENSFDAG00000018599	TRNAU1AP	100	98.606	ENSNLEG00000009822	TRNAU1AP	100	98.606	Nomascus_leucogenys
ENSFDAG00000018599	TRNAU1AP	97	93.525	ENSMEUG00000006117	TRNAU1AP	100	93.525	Notamacropus_eugenii
ENSFDAG00000018599	TRNAU1AP	82	97.273	ENSOPRG00000007084	-	69	97.273	Ochotona_princeps
ENSFDAG00000018599	TRNAU1AP	100	98.955	ENSODEG00000002970	TRNAU1AP	100	98.955	Octodon_degus
ENSFDAG00000018599	TRNAU1AP	80	59.671	ENSONIG00000004715	trnau1apa	95	59.917	Oreochromis_niloticus
ENSFDAG00000018599	TRNAU1AP	99	74.476	ENSOANG00000005325	-	99	74.476	Ornithorhynchus_anatinus
ENSFDAG00000018599	TRNAU1AP	100	76.389	ENSOCUG00000002353	-	100	76.389	Oryctolagus_cuniculus
ENSFDAG00000018599	TRNAU1AP	100	96.516	ENSOCUG00000011704	-	100	96.516	Oryctolagus_cuniculus
ENSFDAG00000018599	TRNAU1AP	89	76.953	ENSOCUG00000006834	-	100	75.000	Oryctolagus_cuniculus
ENSFDAG00000018599	TRNAU1AP	98	58.865	ENSORLG00000010428	trnau1apa	95	57.042	Oryzias_latipes
ENSFDAG00000018599	TRNAU1AP	98	58.020	ENSORLG00020000926	trnau1ap	95	56.849	Oryzias_latipes_hni
ENSFDAG00000018599	TRNAU1AP	98	58.020	ENSORLG00015009858	trnau1ap	95	56.849	Oryzias_latipes_hsok
ENSFDAG00000018599	TRNAU1AP	98	59.044	ENSOMEG00000007873	trnau1apa	95	56.164	Oryzias_melastigma
ENSFDAG00000018599	TRNAU1AP	100	98.606	ENSOGAG00000002274	TRNAU1AP	100	98.606	Otolemur_garnettii
ENSFDAG00000018599	TRNAU1AP	100	98.606	ENSOARG00000002843	TRNAU1AP	100	98.606	Ovis_aries
ENSFDAG00000018599	TRNAU1AP	100	98.606	ENSPPAG00000033927	TRNAU1AP	100	98.606	Pan_paniscus
ENSFDAG00000018599	TRNAU1AP	100	98.606	ENSPPRG00000004416	TRNAU1AP	100	98.606	Panthera_pardus
ENSFDAG00000018599	TRNAU1AP	100	98.606	ENSPTIG00000016677	TRNAU1AP	100	98.606	Panthera_tigris_altaica
ENSFDAG00000018599	TRNAU1AP	95	79.348	ENSPTRG00000000434	-	99	77.899	Pan_troglodytes
ENSFDAG00000018599	TRNAU1AP	100	98.381	ENSPANG00000016019	TRNAU1AP	100	98.381	Papio_anubis
ENSFDAG00000018599	TRNAU1AP	94	74.468	ENSPKIG00000022205	-	93	77.528	Paramormyrops_kingsleyae
ENSFDAG00000018599	TRNAU1AP	95	59.717	ENSPKIG00000015511	trnau1apa	92	57.951	Paramormyrops_kingsleyae
ENSFDAG00000018599	TRNAU1AP	95	94.161	ENSPSIG00000006864	TRNAU1AP	100	94.161	Pelodiscus_sinensis
ENSFDAG00000018599	TRNAU1AP	94	61.397	ENSPMGG00000023893	trnau1apa	91	60.148	Periophthalmus_magnuspinnatus
ENSFDAG00000018599	TRNAU1AP	100	97.909	ENSPEMG00000007877	Trnau1ap	100	97.909	Peromyscus_maniculatus_bairdii
ENSFDAG00000018599	TRNAU1AP	78	60.987	ENSPMAG00000005934	trnau1apa	96	60.185	Petromyzon_marinus
ENSFDAG00000018599	TRNAU1AP	60	60.795	ENSPMAG00000000592	trnau1apa	97	60.795	Petromyzon_marinus
ENSFDAG00000018599	TRNAU1AP	95	56.944	ENSPFOG00000008100	trnau1apa	93	57.639	Poecilia_formosa
ENSFDAG00000018599	TRNAU1AP	91	56.679	ENSPLAG00000010236	trnau1apa	93	57.401	Poecilia_latipinna
ENSFDAG00000018599	TRNAU1AP	96	55.862	ENSPMEG00000016387	trnau1apa	92	56.552	Poecilia_mexicana
ENSFDAG00000018599	TRNAU1AP	93	53.903	ENSPREG00000019821	trnau1apa	86	64.286	Poecilia_reticulata
ENSFDAG00000018599	TRNAU1AP	100	89.879	ENSPPYG00000001639	-	100	89.879	Pongo_abelii
ENSFDAG00000018599	TRNAU1AP	100	98.955	ENSPCOG00000027712	-	100	98.955	Propithecus_coquereli
ENSFDAG00000018599	TRNAU1AP	98	94.628	ENSPCOG00000023470	-	100	94.628	Propithecus_coquereli
ENSFDAG00000018599	TRNAU1AP	100	98.606	ENSPVAG00000017214	TRNAU1AP	100	98.606	Pteropus_vampyrus
ENSFDAG00000018599	TRNAU1AP	99	57.792	ENSPNYG00000010130	trnau1apa	99	58.576	Pundamilia_nyererei
ENSFDAG00000018599	TRNAU1AP	96	54.895	ENSPNAG00000024905	trnau1apa	92	54.093	Pygocentrus_nattereri
ENSFDAG00000018599	TRNAU1AP	94	90.406	ENSRNOG00000055344	Trnau1ap	92	90.406	Rattus_norvegicus
ENSFDAG00000018599	TRNAU1AP	100	98.606	ENSRBIG00000029083	TRNAU1AP	100	98.606	Rhinopithecus_bieti
ENSFDAG00000018599	TRNAU1AP	100	98.606	ENSRROG00000029128	TRNAU1AP	100	98.606	Rhinopithecus_roxellana
ENSFDAG00000018599	TRNAU1AP	100	98.606	ENSSBOG00000021299	TRNAU1AP	100	98.606	Saimiri_boliviensis_boliviensis
ENSFDAG00000018599	TRNAU1AP	100	94.077	ENSSHAG00000008108	TRNAU1AP	100	94.077	Sarcophilus_harrisii
ENSFDAG00000018599	TRNAU1AP	99	55.519	ENSSMAG00000020851	trnau1apa	99	56.818	Scophthalmus_maximus
ENSFDAG00000018599	TRNAU1AP	85	71.111	ENSSDUG00000011734	trnau1apa	94	57.483	Seriola_dumerili
ENSFDAG00000018599	TRNAU1AP	95	60.851	ENSSLDG00000012101	trnau1apa	92	60.851	Seriola_lalandi_dorsalis
ENSFDAG00000018599	TRNAU1AP	97	97.122	ENSSARG00000007536	TRNAU1AP	100	97.122	Sorex_araneus
ENSFDAG00000018599	TRNAU1AP	61	81.818	ENSSPUG00000010415	-	100	81.818	Sphenodon_punctatus
ENSFDAG00000018599	TRNAU1AP	99	85.664	ENSSPUG00000010400	-	100	85.664	Sphenodon_punctatus
ENSFDAG00000018599	TRNAU1AP	99	57.742	ENSSPAG00000005029	trnau1apa	99	57.742	Stegastes_partitus
ENSFDAG00000018599	TRNAU1AP	100	98.606	ENSSSCG00000030284	TRNAU1AP	100	98.606	Sus_scrofa
ENSFDAG00000018599	TRNAU1AP	97	93.885	ENSTGUG00000000735	-	100	93.885	Taeniopygia_guttata
ENSFDAG00000018599	TRNAU1AP	68	53.061	ENSTGUG00000005908	-	100	53.061	Taeniopygia_guttata
ENSFDAG00000018599	TRNAU1AP	99	58.882	ENSTRUG00000003352	trnau1apa	99	58.224	Takifugu_rubripes
ENSFDAG00000018599	TRNAU1AP	95	59.233	ENSTNIG00000006129	trnau1apa	98	57.096	Tetraodon_nigroviridis
ENSFDAG00000018599	TRNAU1AP	85	86.939	ENSTBEG00000008049	-	100	86.939	Tupaia_belangeri
ENSFDAG00000018599	TRNAU1AP	100	98.955	ENSTTRG00000001854	TRNAU1AP	100	98.955	Tursiops_truncatus
ENSFDAG00000018599	TRNAU1AP	95	98.175	ENSUAMG00000008789	TRNAU1AP	100	98.175	Ursus_americanus
ENSFDAG00000018599	TRNAU1AP	100	97.909	ENSUMAG00000011068	TRNAU1AP	100	97.909	Ursus_maritimus
ENSFDAG00000018599	TRNAU1AP	100	88.014	ENSVPAG00000006778	TRNAU1AP	100	88.014	Vicugna_pacos
ENSFDAG00000018599	TRNAU1AP	99	97.183	ENSVVUG00000012518	TRNAU1AP	93	97.183	Vulpes_vulpes
ENSFDAG00000018599	TRNAU1AP	95	55.903	ENSXMAG00000017361	trnau1apa	93	57.639	Xiphophorus_maculatus