EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000019073 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 243 bases
Position: chrKN124472.1:9099547-9099789
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000011552	LSM	PF01423.22	2.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000024266	-	243	-	ENSFDAP00000011552	80 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000019073's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000019073's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000019073	-	100	87.500	ENSFDAG00000020913	-	100	87.500
ENSFDAG00000019073	-	83	45.455	ENSFDAG00000002831	-	77	45.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000019073	-	100	87.500	ENSG00000164167	LSM6	100	87.500	Homo_sapiens
ENSFDAG00000019073	-	100	85.000	ENSAPOG00000019832	lsm6	100	85.000	Acanthochromis_polyacanthus
ENSFDAG00000019073	-	100	87.500	ENSAMEG00000016671	LSM6	100	87.500	Ailuropoda_melanoleuca
ENSFDAG00000019073	-	100	85.000	ENSACIG00000016711	lsm6	100	85.000	Amphilophus_citrinellus
ENSFDAG00000019073	-	100	85.000	ENSAOCG00000002110	lsm6	52	85.000	Amphiprion_ocellaris
ENSFDAG00000019073	-	100	85.000	ENSAPEG00000023992	lsm6	100	85.000	Amphiprion_percula
ENSFDAG00000019073	-	100	85.000	ENSATEG00000012610	lsm6	100	85.000	Anabas_testudineus
ENSFDAG00000019073	-	96	87.013	ENSAPLG00000012594	LSM6	99	87.013	Anas_platyrhynchos
ENSFDAG00000019073	-	100	87.500	ENSACAG00000004004	LSM6	100	87.500	Anolis_carolinensis
ENSFDAG00000019073	-	100	77.500	ENSANAG00000021839	-	100	77.500	Aotus_nancymaae
ENSFDAG00000019073	-	100	87.500	ENSANAG00000030568	-	100	87.500	Aotus_nancymaae
ENSFDAG00000019073	-	100	85.000	ENSACLG00000025621	lsm6	100	85.000	Astatotilapia_calliptera
ENSFDAG00000019073	-	100	85.000	ENSAMXG00000038738	lsm6	100	85.000	Astyanax_mexicanus
ENSFDAG00000019073	-	100	85.000	ENSBTAG00000052085	-	100	85.000	Bos_taurus
ENSFDAG00000019073	-	100	87.500	ENSBTAG00000014060	LSM6	100	87.500	Bos_taurus
ENSFDAG00000019073	-	94	73.333	WBGene00003080	lsm-6	97	73.333	Caenorhabditis_elegans
ENSFDAG00000019073	-	100	87.500	ENSCJAG00000002482	LSM6	100	87.500	Callithrix_jacchus
ENSFDAG00000019073	-	100	87.500	ENSCAFG00000007738	LSM6	100	87.500	Canis_familiaris
ENSFDAG00000019073	-	100	87.500	ENSCAFG00020025902	LSM6	100	87.500	Canis_lupus_dingo
ENSFDAG00000019073	-	100	87.500	ENSCHIG00000010334	-	100	87.500	Capra_hircus
ENSFDAG00000019073	-	89	87.324	ENSCHIG00000012864	-	100	87.324	Capra_hircus
ENSFDAG00000019073	-	100	73.750	ENSCHIG00000024198	-	95	73.750	Capra_hircus
ENSFDAG00000019073	-	100	87.500	ENSTSYG00000026972	LSM6	100	87.500	Carlito_syrichta
ENSFDAG00000019073	-	80	81.250	ENSTSYG00000012759	-	84	81.250	Carlito_syrichta
ENSFDAG00000019073	-	80	89.062	ENSCAPG00000011179	-	98	89.062	Cavia_aperea
ENSFDAG00000019073	-	100	87.500	ENSCAPG00000008104	LSM6	100	87.500	Cavia_aperea
ENSFDAG00000019073	-	100	87.500	ENSCPOG00000032655	LSM6	100	87.500	Cavia_porcellus
ENSFDAG00000019073	-	99	87.342	ENSCCAG00000020665	-	99	87.342	Cebus_capucinus
ENSFDAG00000019073	-	100	87.500	ENSCCAG00000036437	LSM6	100	87.500	Cebus_capucinus
ENSFDAG00000019073	-	100	87.500	ENSCATG00000002770	-	100	87.500	Cercocebus_atys
ENSFDAG00000019073	-	100	70.000	ENSCATG00000038799	-	100	70.000	Cercocebus_atys
ENSFDAG00000019073	-	100	87.500	ENSCLAG00000005495	LSM6	100	87.500	Chinchilla_lanigera
ENSFDAG00000019073	-	89	74.648	ENSCLAG00000005685	-	100	74.648	Chinchilla_lanigera
ENSFDAG00000019073	-	100	87.500	ENSCSAG00000003421	LSM6	100	87.500	Chlorocebus_sabaeus
ENSFDAG00000019073	-	100	71.250	ENSCHOG00000003420	LSM6	100	71.250	Choloepus_hoffmanni
ENSFDAG00000019073	-	100	87.500	ENSCPBG00000027472	LSM6	84	87.500	Chrysemys_picta_bellii
ENSFDAG00000019073	-	95	84.211	ENSCING00000019152	-	93	84.211	Ciona_intestinalis
ENSFDAG00000019073	-	95	85.526	ENSCSAVG00000002065	-	93	85.526	Ciona_savignyi
ENSFDAG00000019073	-	100	87.500	ENSCANG00000006849	-	100	87.500	Colobus_angolensis_palliatus
ENSFDAG00000019073	-	100	87.500	ENSCANG00000041263	-	100	87.500	Colobus_angolensis_palliatus
ENSFDAG00000019073	-	100	67.500	ENSCANG00000035214	-	100	67.500	Colobus_angolensis_palliatus
ENSFDAG00000019073	-	100	87.500	ENSCGRG00001017142	Lsm6	100	87.500	Cricetulus_griseus_chok1gshd
ENSFDAG00000019073	-	100	87.500	ENSCGRG00000008320	Lsm6	100	87.500	Cricetulus_griseus_crigri
ENSFDAG00000019073	-	100	85.000	ENSCSEG00000000423	lsm6	100	85.000	Cynoglossus_semilaevis
ENSFDAG00000019073	-	100	85.000	ENSCVAG00000001592	lsm6	100	85.000	Cyprinodon_variegatus
ENSFDAG00000019073	-	100	85.000	ENSDARG00000036995	lsm6	100	85.000	Danio_rerio
ENSFDAG00000019073	-	100	86.250	ENSDNOG00000044848	-	100	86.250	Dasypus_novemcinctus
ENSFDAG00000019073	-	98	80.000	ENSDNOG00000040186	-	86	80.000	Dasypus_novemcinctus
ENSFDAG00000019073	-	100	87.500	ENSDORG00000000933	Lsm6	100	87.500	Dipodomys_ordii
ENSFDAG00000019073	-	96	74.026	FBgn0034564	CG9344	97	74.026	Drosophila_melanogaster
ENSFDAG00000019073	-	60	87.500	ENSETEG00000013098	LSM6	100	87.500	Echinops_telfairi
ENSFDAG00000019073	-	100	87.500	ENSEBUG00000017073	lsm6	100	87.500	Eptatretus_burgeri
ENSFDAG00000019073	-	86	88.406	ENSEASG00005001533	LSM6	72	88.406	Equus_asinus_asinus
ENSFDAG00000019073	-	100	87.500	ENSECAG00000021036	LSM6	100	87.500	Equus_caballus
ENSFDAG00000019073	-	99	63.291	ENSEEUG00000002101	LSM6	100	63.291	Erinaceus_europaeus
ENSFDAG00000019073	-	100	85.000	ENSELUG00000014301	LSM6	100	85.000	Esox_lucius
ENSFDAG00000019073	-	100	87.500	ENSFCAG00000003047	LSM6	100	87.500	Felis_catus
ENSFDAG00000019073	-	100	87.500	ENSFALG00000005509	LSM6	92	87.500	Ficedula_albicollis
ENSFDAG00000019073	-	100	85.000	ENSFHEG00000007948	lsm6	100	85.000	Fundulus_heteroclitus
ENSFDAG00000019073	-	100	85.000	ENSGMOG00000015550	lsm6	100	85.000	Gadus_morhua
ENSFDAG00000019073	-	100	87.500	ENSGALG00000009985	LSM6	100	87.500	Gallus_gallus
ENSFDAG00000019073	-	100	85.000	ENSGAFG00000017763	lsm6	100	85.000	Gambusia_affinis
ENSFDAG00000019073	-	99	86.076	ENSGACG00000017223	lsm6	99	86.076	Gasterosteus_aculeatus
ENSFDAG00000019073	-	100	87.500	ENSGAGG00000020980	LSM6	100	87.500	Gopherus_agassizii
ENSFDAG00000019073	-	100	87.500	ENSGGOG00000001310	LSM6	100	87.500	Gorilla_gorilla
ENSFDAG00000019073	-	100	85.000	ENSHBUG00000008618	lsm6	100	85.000	Haplochromis_burtoni
ENSFDAG00000019073	-	100	87.500	ENSHGLG00000000205	LSM6	100	87.500	Heterocephalus_glaber_female
ENSFDAG00000019073	-	100	87.500	ENSHGLG00100014341	LSM6	100	87.500	Heterocephalus_glaber_male
ENSFDAG00000019073	-	100	85.000	ENSHCOG00000005591	lsm6	100	85.000	Hippocampus_comes
ENSFDAG00000019073	-	100	83.750	ENSIPUG00000004508	lsm6	100	83.750	Ictalurus_punctatus
ENSFDAG00000019073	-	100	87.500	ENSSTOG00000002678	LSM6	100	87.500	Ictidomys_tridecemlineatus
ENSFDAG00000019073	-	96	75.325	ENSJJAG00000016942	-	97	75.325	Jaculus_jaculus
ENSFDAG00000019073	-	100	87.500	ENSJJAG00000013845	-	100	87.500	Jaculus_jaculus
ENSFDAG00000019073	-	100	80.000	ENSJJAG00000011211	-	100	80.000	Jaculus_jaculus
ENSFDAG00000019073	-	100	85.000	ENSKMAG00000004105	lsm6	100	85.000	Kryptolebias_marmoratus
ENSFDAG00000019073	-	100	85.000	ENSLBEG00000018441	lsm6	100	85.000	Labrus_bergylta
ENSFDAG00000019073	-	100	87.500	ENSLACG00000006937	LSM6	100	87.500	Latimeria_chalumnae
ENSFDAG00000019073	-	100	85.000	ENSLOCG00000008852	lsm6	100	85.000	Lepisosteus_oculatus
ENSFDAG00000019073	-	100	83.750	ENSLOCG00000017683	-	100	83.750	Lepisosteus_oculatus
ENSFDAG00000019073	-	100	87.500	ENSLAFG00000001952	LSM6	100	87.500	Loxodonta_africana
ENSFDAG00000019073	-	100	87.500	ENSMFAG00000033073	LSM6	100	87.500	Macaca_fascicularis
ENSFDAG00000019073	-	100	87.500	ENSMNEG00000034820	-	100	87.500	Macaca_nemestrina
ENSFDAG00000019073	-	100	70.000	ENSMNEG00000040412	-	100	70.000	Macaca_nemestrina
ENSFDAG00000019073	-	100	87.500	ENSMLEG00000035153	LSM6	100	87.500	Mandrillus_leucophaeus
ENSFDAG00000019073	-	100	85.000	ENSMAMG00000014029	lsm6	100	85.000	Mastacembelus_armatus
ENSFDAG00000019073	-	100	85.000	ENSMZEG00005009146	lsm6	100	85.000	Maylandia_zebra
ENSFDAG00000019073	-	100	87.500	ENSMGAG00000003802	LSM6	100	87.500	Meleagris_gallopavo
ENSFDAG00000019073	-	100	87.500	ENSMAUG00000014938	Lsm6	100	87.500	Mesocricetus_auratus
ENSFDAG00000019073	-	98	82.051	ENSMICG00000047411	-	92	82.051	Microcebus_murinus
ENSFDAG00000019073	-	100	87.500	ENSMICG00000042599	LSM6	100	87.500	Microcebus_murinus
ENSFDAG00000019073	-	100	87.500	ENSMOCG00000020049	Lsm6	100	87.500	Microtus_ochrogaster
ENSFDAG00000019073	-	100	80.000	ENSMMOG00000007379	-	100	80.000	Mola_mola
ENSFDAG00000019073	-	100	85.000	ENSMMOG00000005470	lsm6	100	85.000	Mola_mola
ENSFDAG00000019073	-	100	87.500	ENSMODG00000000526	LSM6	100	87.500	Monodelphis_domestica
ENSFDAG00000019073	-	100	85.000	ENSMALG00000002419	lsm6	100	85.000	Monopterus_albus
ENSFDAG00000019073	-	100	87.500	MGP_CAROLIEiJ_G0031245	Lsm6	100	87.500	Mus_caroli
ENSFDAG00000019073	-	100	87.500	ENSMUSG00000031683	Lsm6	100	87.500	Mus_musculus
ENSFDAG00000019073	-	100	87.500	MGP_PahariEiJ_G0022851	Lsm6	100	87.500	Mus_pahari
ENSFDAG00000019073	-	100	87.500	MGP_SPRETEiJ_G0032365	Lsm6	100	87.500	Mus_spretus
ENSFDAG00000019073	-	99	88.608	ENSMPUG00000006936	LSM6	92	88.608	Mustela_putorius_furo
ENSFDAG00000019073	-	100	87.500	ENSMLUG00000026355	LSM6	100	87.500	Myotis_lucifugus
ENSFDAG00000019073	-	100	87.500	ENSNGAG00000019116	Lsm6	100	87.500	Nannospalax_galili
ENSFDAG00000019073	-	100	85.000	ENSNBRG00000004887	lsm6	100	85.000	Neolamprologus_brichardi
ENSFDAG00000019073	-	100	87.500	ENSNLEG00000005584	LSM6	100	87.500	Nomascus_leucogenys
ENSFDAG00000019073	-	100	86.250	ENSOPRG00000011199	LSM6	100	86.250	Ochotona_princeps
ENSFDAG00000019073	-	96	84.416	ENSODEG00000018684	-	100	84.416	Octodon_degus
ENSFDAG00000019073	-	100	85.000	ENSODEG00000020420	-	100	85.000	Octodon_degus
ENSFDAG00000019073	-	100	86.250	ENSODEG00000002307	-	100	86.250	Octodon_degus
ENSFDAG00000019073	-	100	83.750	ENSODEG00000019419	-	100	83.750	Octodon_degus
ENSFDAG00000019073	-	100	85.000	ENSONIG00000010005	lsm6	100	85.000	Oreochromis_niloticus
ENSFDAG00000019073	-	75	76.667	ENSOANG00000006895	-	79	76.667	Ornithorhynchus_anatinus
ENSFDAG00000019073	-	75	76.667	ENSOANG00000006894	-	79	76.667	Ornithorhynchus_anatinus
ENSFDAG00000019073	-	100	83.750	ENSORLG00000024158	lsm6	100	83.750	Oryzias_latipes
ENSFDAG00000019073	-	100	83.750	ENSORLG00020017383	lsm6	100	83.750	Oryzias_latipes_hni
ENSFDAG00000019073	-	100	83.750	ENSORLG00015016903	lsm6	100	83.750	Oryzias_latipes_hsok
ENSFDAG00000019073	-	100	85.000	ENSOMEG00000000074	lsm6	100	85.000	Oryzias_melastigma
ENSFDAG00000019073	-	100	87.500	ENSOGAG00000033153	-	100	87.500	Otolemur_garnettii
ENSFDAG00000019073	-	100	87.500	ENSOGAG00000026665	-	100	87.500	Otolemur_garnettii
ENSFDAG00000019073	-	99	86.076	ENSOARG00000011641	-	92	86.076	Ovis_aries
ENSFDAG00000019073	-	86	88.406	ENSOARG00000008509	-	88	88.406	Ovis_aries
ENSFDAG00000019073	-	100	87.500	ENSPPAG00000037929	LSM6	100	87.500	Pan_paniscus
ENSFDAG00000019073	-	100	87.500	ENSPPRG00000012806	LSM6	100	87.500	Panthera_pardus
ENSFDAG00000019073	-	100	87.500	ENSPTIG00000019769	LSM6	100	87.500	Panthera_tigris_altaica
ENSFDAG00000019073	-	100	87.500	ENSPTRG00000016488	LSM6	100	87.500	Pan_troglodytes
ENSFDAG00000019073	-	100	87.500	ENSPANG00000006552	LSM6	100	87.500	Papio_anubis
ENSFDAG00000019073	-	100	85.000	ENSPKIG00000016176	lsm6	100	85.000	Paramormyrops_kingsleyae
ENSFDAG00000019073	-	100	87.500	ENSPSIG00000016942	LSM6	100	87.500	Pelodiscus_sinensis
ENSFDAG00000019073	-	100	85.000	ENSPMGG00000018004	lsm6	100	85.000	Periophthalmus_magnuspinnatus
ENSFDAG00000019073	-	100	87.500	ENSPEMG00000012410	Lsm6	100	87.500	Peromyscus_maniculatus_bairdii
ENSFDAG00000019073	-	100	87.500	ENSPMAG00000006949	lsm6	100	87.500	Petromyzon_marinus
ENSFDAG00000019073	-	100	87.500	ENSPCIG00000023469	LSM6	80	88.406	Phascolarctos_cinereus
ENSFDAG00000019073	-	100	85.000	ENSPFOG00000008881	lsm6	100	85.000	Poecilia_formosa
ENSFDAG00000019073	-	100	85.000	ENSPLAG00000003202	lsm6	100	85.000	Poecilia_latipinna
ENSFDAG00000019073	-	100	85.000	ENSPMEG00000004000	lsm6	100	85.000	Poecilia_mexicana
ENSFDAG00000019073	-	100	85.000	ENSPREG00000023235	lsm6	100	85.000	Poecilia_reticulata
ENSFDAG00000019073	-	100	87.500	ENSPPYG00000015105	LSM6	100	87.500	Pongo_abelii
ENSFDAG00000019073	-	100	87.500	ENSPCOG00000013899	LSM6	100	87.500	Propithecus_coquereli
ENSFDAG00000019073	-	100	85.000	ENSPNYG00000012614	lsm6	100	85.000	Pundamilia_nyererei
ENSFDAG00000019073	-	100	85.000	ENSPNAG00000018779	lsm6	100	85.000	Pygocentrus_nattereri
ENSFDAG00000019073	-	100	87.500	ENSRNOG00000030374	Lsm6	100	87.500	Rattus_norvegicus
ENSFDAG00000019073	-	100	87.500	ENSRNOG00000049370	LOC100360750	100	87.500	Rattus_norvegicus
ENSFDAG00000019073	-	100	87.500	ENSRBIG00000027878	LSM6	100	87.500	Rhinopithecus_bieti
ENSFDAG00000019073	-	100	87.500	ENSRROG00000024868	LSM6	100	87.500	Rhinopithecus_roxellana
ENSFDAG00000019073	-	95	38.750	YDR378C	-	93	42.500	Saccharomyces_cerevisiae
ENSFDAG00000019073	-	100	87.500	ENSSBOG00000021229	-	100	87.500	Saimiri_boliviensis_boliviensis
ENSFDAG00000019073	-	100	67.500	ENSSBOG00000028103	-	100	67.500	Saimiri_boliviensis_boliviensis
ENSFDAG00000019073	-	100	85.000	ENSSFOG00015016480	lsm6	100	85.000	Scleropages_formosus
ENSFDAG00000019073	-	100	85.000	ENSSMAG00000004550	lsm6	100	85.000	Scophthalmus_maximus
ENSFDAG00000019073	-	100	85.000	ENSSDUG00000020459	lsm6	50	85.000	Seriola_dumerili
ENSFDAG00000019073	-	100	85.000	ENSSLDG00000020533	lsm6	83	85.000	Seriola_lalandi_dorsalis
ENSFDAG00000019073	-	86	86.957	ENSSLDG00000004136	-	59	86.957	Seriola_lalandi_dorsalis
ENSFDAG00000019073	-	60	87.500	ENSSARG00000000689	LSM6	100	87.500	Sorex_araneus
ENSFDAG00000019073	-	100	87.500	ENSSPUG00000008657	LSM6	100	87.500	Sphenodon_punctatus
ENSFDAG00000019073	-	100	85.000	ENSSPAG00000003246	lsm6	100	85.000	Stegastes_partitus
ENSFDAG00000019073	-	100	87.500	ENSSSCG00000035973	LSM6	100	87.500	Sus_scrofa
ENSFDAG00000019073	-	100	87.500	ENSTGUG00000002663	LSM6	100	87.500	Taeniopygia_guttata
ENSFDAG00000019073	-	100	85.000	ENSTRUG00000023398	lsm6	100	85.000	Takifugu_rubripes
ENSFDAG00000019073	-	100	85.000	ENSTNIG00000017725	lsm6	100	85.000	Tetraodon_nigroviridis
ENSFDAG00000019073	-	100	87.500	ENSTTRG00000004609	LSM6	100	87.500	Tursiops_truncatus
ENSFDAG00000019073	-	98	80.769	ENSUAMG00000014213	LSM6	64	80.769	Ursus_americanus
ENSFDAG00000019073	-	98	80.769	ENSUMAG00000015727	LSM6	64	80.769	Ursus_maritimus
ENSFDAG00000019073	-	100	87.500	ENSVPAG00000006922	LSM6	100	87.500	Vicugna_pacos
ENSFDAG00000019073	-	100	87.500	ENSVVUG00000009254	LSM6	68	87.500	Vulpes_vulpes
ENSFDAG00000019073	-	100	87.500	ENSXETG00000023683	lsm6	100	87.500	Xenopus_tropicalis
ENSFDAG00000019073	-	100	85.000	ENSXMAG00000009606	lsm6	100	85.000	Xiphophorus_maculatus