EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000019296 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 9335 bases
Position: chrKN123555.1:759185-768519
Accession: 104876741
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000011844	zf-C2H2	PF00096.26	4.2e-25	1	4
ENSFDAP00000011844	zf-C2H2	PF00096.26	4.2e-25	2	4
ENSFDAP00000011844	zf-C2H2	PF00096.26	4.2e-25	3	4
ENSFDAP00000011844	zf-C2H2	PF00096.26	4.2e-25	4	4
ENSFDAP00000011844	zf-met	PF12874.7	1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000024536	-	3485	XM_010644943	ENSFDAP00000011844	135 (aa)	XP_010643245	UPI0000ECFA75

Gene Model

Click here to download ENSFDAG00000019296's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000019296's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000019296	-	100	37.594	ENSFDAG00000016958	SNAI2	52	37.594
ENSFDAG00000019296	-	100	46.512	ENSFDAG00000008687	-	89	46.512
ENSFDAG00000019296	-	100	44.094	ENSFDAG00000008114	ZNF81	67	44.094
ENSFDAG00000019296	-	100	48.031	ENSFDAG00000015190	-	86	48.031
ENSFDAG00000019296	-	93	38.095	ENSFDAG00000013872	ZIC1	58	38.095
ENSFDAG00000019296	-	100	47.761	ENSFDAG00000008549	ZNF2	64	47.761
ENSFDAG00000019296	-	93	39.048	ENSFDAG00000014929	ZIC3	65	39.048
ENSFDAG00000019296	-	98	32.847	ENSFDAG00000019359	-	78	32.847
ENSFDAG00000019296	-	100	46.739	ENSFDAG00000007103	ZNF236	53	46.739
ENSFDAG00000019296	-	79	36.585	ENSFDAG00000010852	-	72	36.585
ENSFDAG00000019296	-	99	45.570	ENSFDAG00000003974	ZNF574	54	43.478
ENSFDAG00000019296	-	98	42.748	ENSFDAG00000016582	ZNF398	50	42.748
ENSFDAG00000019296	-	100	39.535	ENSFDAG00000020159	ZNF319	85	39.535
ENSFDAG00000019296	-	100	50.000	ENSFDAG00000009594	-	75	50.000
ENSFDAG00000019296	-	99	47.573	ENSFDAG00000010369	-	84	47.573
ENSFDAG00000019296	-	99	46.018	ENSFDAG00000021361	PRDM5	74	44.615
ENSFDAG00000019296	-	99	37.069	ENSFDAG00000016841	GTF3A	62	37.069
ENSFDAG00000019296	-	100	40.000	ENSFDAG00000008730	OVOL2	70	40.000
ENSFDAG00000019296	-	100	41.964	ENSFDAG00000008733	SCRT1	60	41.964
ENSFDAG00000019296	-	100	47.273	ENSFDAG00000006075	-	100	47.273
ENSFDAG00000019296	-	100	44.531	ENSFDAG00000020138	-	69	44.531
ENSFDAG00000019296	-	100	43.284	ENSFDAG00000005609	-	67	43.284
ENSFDAG00000019296	-	100	46.053	ENSFDAG00000010005	ZFP64	65	39.362
ENSFDAG00000019296	-	100	48.031	ENSFDAG00000015590	ZNF235	69	48.031

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000019296	-	100	100.000	ENSAMEG00000013858	-	92	100.000	Ailuropoda_melanoleuca
ENSFDAG00000019296	-	99	72.388	ENSACIG00000002180	-	99	72.388	Amphilophus_citrinellus
ENSFDAG00000019296	-	100	100.000	ENSAPLG00000015700	GFI1	50	100.000	Anas_platyrhynchos
ENSFDAG00000019296	-	84	82.143	ENSACLG00000001258	-	91	82.143	Astatotilapia_calliptera
ENSFDAG00000019296	-	82	82.883	ENSAMXG00000015228	-	51	82.883	Astyanax_mexicanus
ENSFDAG00000019296	-	99	93.284	ENSAMXG00000006669	GFI1	54	93.284	Astyanax_mexicanus
ENSFDAG00000019296	-	84	100.000	ENSCAPG00000016268	-	100	100.000	Cavia_aperea
ENSFDAG00000019296	-	100	99.259	ENSCPBG00000015742	-	100	99.259	Chrysemys_picta_bellii
ENSFDAG00000019296	-	99	78.358	ENSCING00000011342	-	71	78.358	Ciona_intestinalis
ENSFDAG00000019296	-	100	79.259	ENSCSAVG00000005904	-	83	79.259	Ciona_savignyi
ENSFDAG00000019296	-	100	100.000	ENSCGRG00000013485	-	100	100.000	Cricetulus_griseus_crigri
ENSFDAG00000019296	-	100	100.000	ENSDORG00000023443	-	100	100.000	Dipodomys_ordii
ENSFDAG00000019296	-	100	99.259	ENSGAGG00000015899	GFI1	100	99.259	Gopherus_agassizii
ENSFDAG00000019296	-	100	96.296	ENSIPUG00000013414	GFI1	56	96.296	Ictalurus_punctatus
ENSFDAG00000019296	-	82	81.982	ENSIPUG00000021407	-	52	81.982	Ictalurus_punctatus
ENSFDAG00000019296	-	84	100.000	ENSJJAG00000022622	-	100	100.000	Jaculus_jaculus
ENSFDAG00000019296	-	100	100.000	ENSMMUG00000005068	GFI1	100	100.000	Macaca_mulatta
ENSFDAG00000019296	-	100	100.000	ENSMAUG00000021273	-	100	100.000	Mesocricetus_auratus
ENSFDAG00000019296	-	100	100.000	ENSMOCG00000004478	-	100	100.000	Microtus_ochrogaster
ENSFDAG00000019296	-	100	95.556	ENSMMOG00000005556	gfi1ab	62	95.556	Mola_mola
ENSFDAG00000019296	-	100	100.000	MGP_CAROLIEiJ_G0027508	Gfi1	100	100.000	Mus_caroli
ENSFDAG00000019296	-	100	100.000	MGP_PahariEiJ_G0017280	Gfi1	100	100.000	Mus_pahari
ENSFDAG00000019296	-	100	100.000	ENSNGAG00000002549	-	100	100.000	Nannospalax_galili
ENSFDAG00000019296	-	84	78.761	ENSNBRG00000001834	-	94	78.761	Neolamprologus_brichardi
ENSFDAG00000019296	-	84	80.531	ENSNBRG00000010351	-	88	80.531	Neolamprologus_brichardi
ENSFDAG00000019296	-	100	100.000	ENSODEG00000006410	-	100	100.000	Octodon_degus
ENSFDAG00000019296	-	100	98.519	ENSOANG00000022289	-	72	98.519	Ornithorhynchus_anatinus
ENSFDAG00000019296	-	99	88.722	ENSPTIG00000002680	-	99	88.722	Panthera_tigris_altaica
ENSFDAG00000019296	-	100	97.778	ENSPMGG00000012546	gfi1ab	73	97.778	Periophthalmus_magnuspinnatus
ENSFDAG00000019296	-	100	97.778	ENSPLAG00000010879	gfi1ab	55	97.778	Poecilia_latipinna
ENSFDAG00000019296	-	83	82.143	ENSPNYG00000001775	-	88	82.143	Pundamilia_nyererei
ENSFDAG00000019296	-	81	82.727	ENSPNAG00000014299	-	54	82.727	Pygocentrus_nattereri
ENSFDAG00000019296	-	96	71.756	ENSSLDG00000017614	-	95	71.756	Seriola_lalandi_dorsalis
ENSFDAG00000019296	-	100	97.778	ENSSPAG00000009140	gfi1ab	58	97.778	Stegastes_partitus
ENSFDAG00000019296	-	100	100.000	ENSTGUG00000006060	GFI1	58	100.000	Taeniopygia_guttata
ENSFDAG00000019296	-	100	100.000	ENSUMAG00000011251	-	100	100.000	Ursus_maritimus
ENSFDAG00000019296	-	83	92.857	ENSXCOG00000009186	-	90	92.857	Xiphophorus_couchianus
ENSFDAG00000019296	-	96	64.667	ENSXMAG00000006527	-	50	64.667	Xiphophorus_maculatus