EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000019359 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 26155 bases
Position: chrKN122104.1:16252024-16278178
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000011926	zf-C2H2	PF00096.26	1e-19	1	3
ENSFDAP00000011926	zf-C2H2	PF00096.26	1e-19	2	3
ENSFDAP00000011926	zf-C2H2	PF00096.26	1e-19	3	3
ENSFDAP00000011926	zf-met	PF12874.7	4.7e-10	1	2
ENSFDAP00000011926	zf-met	PF12874.7	4.7e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000030315	-	777	-	ENSFDAP00000011926	258 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000019359's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000019359's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000019359	-	79	36.134	ENSFDAG00000015190	-	76	34.783
ENSFDAG00000019359	-	81	44.898	ENSFDAG00000008114	ZNF81	51	44.898
ENSFDAG00000019359	-	78	32.847	ENSFDAG00000019296	-	98	32.847
ENSFDAG00000019359	-	84	37.879	ENSFDAG00000009594	-	70	36.190
ENSFDAG00000019359	-	78	38.073	ENSFDAG00000015590	ZNF235	67	38.073
ENSFDAG00000019359	-	78	36.275	ENSFDAG00000005609	-	67	36.275
ENSFDAG00000019359	-	78	38.017	ENSFDAG00000006075	-	97	38.017
ENSFDAG00000019359	-	81	39.623	ENSFDAG00000010369	-	78	39.623
ENSFDAG00000019359	-	83	35.593	ENSFDAG00000021361	PRDM5	73	34.375
ENSFDAG00000019359	-	84	36.250	ENSFDAG00000007103	ZNF236	56	35.897
ENSFDAG00000019359	-	78	31.967	ENSFDAG00000003974	ZNF574	54	32.000
ENSFDAG00000019359	-	78	50.980	ENSFDAG00000008687	-	90	39.000
ENSFDAG00000019359	-	78	37.981	ENSFDAG00000020138	-	69	37.981
ENSFDAG00000019359	-	77	30.968	ENSFDAG00000014929	ZIC3	77	30.968
ENSFDAG00000019359	-	83	34.632	ENSFDAG00000008549	ZNF2	58	36.073
ENSFDAG00000019359	-	83	31.892	ENSFDAG00000020159	ZNF319	86	31.892

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000019359	-	96	72.202	ENSG00000114853	ZBTB47	92	69.097	Homo_sapiens
ENSFDAG00000019359	-	94	69.643	ENSACIG00000020938	zbtb47b	72	70.161	Amphilophus_citrinellus
ENSFDAG00000019359	-	93	67.286	ENSAMXG00000042191	zbtb47a	75	68.826	Astyanax_mexicanus
ENSFDAG00000019359	-	89	72.761	ENSCPBG00000004296	ZBTB47	87	61.303	Chrysemys_picta_bellii
ENSFDAG00000019359	-	99	61.856	ENSCSEG00000017606	zbtb47b	72	64.659	Cynoglossus_semilaevis
ENSFDAG00000019359	-	93	64.184	ENSDARG00000057751	zbtb47a	82	65.587	Danio_rerio
ENSFDAG00000019359	-	93	70.073	ENSDARG00000079547	zbtb47b	95	73.387	Danio_rerio
ENSFDAG00000019359	-	89	70.455	ENSETEG00000013682	-	53	97.297	Echinops_telfairi
ENSFDAG00000019359	-	83	52.049	ENSEBUG00000011263	zbtb47b	54	52.049	Eptatretus_burgeri
ENSFDAG00000019359	-	89	75.385	ENSFCAG00000000532	ZBTB47	95	66.107	Felis_catus
ENSFDAG00000019359	-	85	75.600	ENSGALG00000005287	ZBTB47	93	65.972	Gallus_gallus
ENSFDAG00000019359	-	85	73.600	ENSGAFG00000005321	zbtb47b	84	72.177	Gambusia_affinis
ENSFDAG00000019359	-	89	71.538	ENSGACG00000003372	zbtb47b	64	58.844	Gasterosteus_aculeatus
ENSFDAG00000019359	-	83	73.061	ENSIPUG00000011399	zbtb47b	93	63.668	Ictalurus_punctatus
ENSFDAG00000019359	-	94	64.364	ENSIPUG00000003040	zbtb47a	82	67.073	Ictalurus_punctatus
ENSFDAG00000019359	-	100	66.323	ENSKMAG00000010330	zbtb47b	75	70.565	Kryptolebias_marmoratus
ENSFDAG00000019359	-	93	68.382	ENSMAMG00000001808	zbtb47b	73	68.548	Mastacembelus_armatus
ENSFDAG00000019359	-	99	64.505	ENSMALG00000006454	zbtb47b	96	60.584	Monopterus_albus
ENSFDAG00000019359	-	94	69.039	ENSNBRG00000018718	zbtb47b	78	65.468	Neolamprologus_brichardi
ENSFDAG00000019359	-	71	73.832	ENSOANG00000010793	-	95	62.891	Ornithorhynchus_anatinus
ENSFDAG00000019359	-	93	72.593	ENSOGAG00000003836	ZBTB47	50	68.750	Otolemur_garnettii
ENSFDAG00000019359	-	80	69.620	ENSPTIG00000013306	-	90	69.130	Panthera_tigris_altaica
ENSFDAG00000019359	-	83	54.251	ENSPMAG00000006198	ZBTB47	71	54.251	Petromyzon_marinus
ENSFDAG00000019359	-	93	68.817	ENSPLAG00000007917	zbtb47b	84	72.177	Poecilia_latipinna
ENSFDAG00000019359	-	93	68.817	ENSPMEG00000005793	zbtb47b	82	71.371	Poecilia_mexicana
ENSFDAG00000019359	-	93	74.444	ENSPPYG00000029781	-	77	69.444	Pongo_abelii
ENSFDAG00000019359	-	81	66.667	ENSPNYG00000004668	zbtb47b	50	62.551	Pundamilia_nyererei
ENSFDAG00000019359	-	93	65.934	ENSPNAG00000004318	zbtb47a	77	68.548	Pygocentrus_nattereri
ENSFDAG00000019359	-	97	72.760	ENSRBIG00000036706	-	92	69.097	Rhinopithecus_bieti
ENSFDAG00000019359	-	94	69.286	ENSSLDG00000014177	zbtb47b	72	70.565	Seriola_lalandi_dorsalis
ENSFDAG00000019359	-	85	73.200	ENSXCOG00000009992	zbtb47b	82	70.968	Xiphophorus_couchianus