EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000019371 (Gene tree)
Gene ID: 104849752
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 77142 bases
Position: chrKN123966.1:525914-603055
Accession: 104849752
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000011933	DND1_DSRM	PF14709.7	8.2e-25	1	1
ENSFDAP00000011933	RRM_1	PF00076.22	5.3e-39	1	3
ENSFDAP00000011933	RRM_1	PF00076.22	5.3e-39	2	3
ENSFDAP00000011933	RRM_1	PF00076.22	5.3e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000024613	A1CF-201	3369	XM_010606286	ENSFDAP00000011933	587 (aa)	XP_010604588	UPI00053F90B1

Gene Model

Click here to download ENSFDAG00000019371's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000019371's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000019371	A1CF	52	49.839	ENSFDAG00000017441	-	70	48.765
ENSFDAG00000019371	A1CF	74	57.906	ENSFDAG00000016326	RBM47	73	57.906
ENSFDAG00000019371	A1CF	87	52.703	ENSFDAG00000006445	-	92	52.510
ENSFDAG00000019371	A1CF	95	49.117	ENSFDAG00000019281	-	87	51.257
ENSFDAG00000019371	A1CF	52	52.427	ENSFDAG00000005861	SYNCRIP	57	51.385
ENSFDAG00000019371	A1CF	53	52.215	ENSFDAG00000016898	-	50	52.215

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000019371	A1CF	100	95.571	ENSG00000148584	A1CF	100	99.502	Homo_sapiens
ENSFDAG00000019371	A1CF	100	73.613	ENSAPOG00000008259	a1cf	100	73.613	Acanthochromis_polyacanthus
ENSFDAG00000019371	A1CF	100	91.933	ENSAMEG00000000523	A1CF	100	92.437	Ailuropoda_melanoleuca
ENSFDAG00000019371	A1CF	100	75.537	ENSACIG00000008632	a1cf	100	76.860	Amphilophus_citrinellus
ENSFDAG00000019371	A1CF	100	74.295	ENSAOCG00000023744	a1cf	96	84.058	Amphiprion_ocellaris
ENSFDAG00000019371	A1CF	100	73.159	ENSAPEG00000009537	a1cf	100	73.977	Amphiprion_percula
ENSFDAG00000019371	A1CF	100	75.908	ENSATEG00000013720	a1cf	100	77.228	Anabas_testudineus
ENSFDAG00000019371	A1CF	100	86.913	ENSAPLG00000002964	A1CF	100	86.745	Anas_platyrhynchos
ENSFDAG00000019371	A1CF	100	84.014	ENSACAG00000015269	A1CF	100	83.503	Anolis_carolinensis
ENSFDAG00000019371	A1CF	100	95.400	ENSANAG00000019974	A1CF	100	95.400	Aotus_nancymaae
ENSFDAG00000019371	A1CF	100	73.179	ENSACLG00000017428	a1cf	100	74.669	Astatotilapia_calliptera
ENSFDAG00000019371	A1CF	100	72.727	ENSAMXG00000018180	a1cf	100	72.893	Astyanax_mexicanus
ENSFDAG00000019371	A1CF	100	94.719	ENSBTAG00000021195	A1CF	100	95.539	Bos_taurus
ENSFDAG00000019371	A1CF	100	94.286	ENSCJAG00000005045	A1CF	100	94.286	Callithrix_jacchus
ENSFDAG00000019371	A1CF	100	91.429	ENSCAFG00000015581	A1CF	100	91.933	Canis_familiaris
ENSFDAG00000019371	A1CF	100	91.429	ENSCAFG00020026421	A1CF	98	94.613	Canis_lupus_dingo
ENSFDAG00000019371	A1CF	100	92.773	ENSCHIG00000020411	A1CF	100	92.773	Capra_hircus
ENSFDAG00000019371	A1CF	94	94.043	ENSTSYG00000001755	A1CF	100	94.224	Carlito_syrichta
ENSFDAG00000019371	A1CF	100	83.129	ENSCAPG00000017386	A1CF	100	83.129	Cavia_aperea
ENSFDAG00000019371	A1CF	100	94.286	ENSCPOG00000009807	A1CF	100	94.286	Cavia_porcellus
ENSFDAG00000019371	A1CF	100	94.286	ENSCCAG00000018168	A1CF	100	94.286	Cebus_capucinus
ENSFDAG00000019371	A1CF	100	95.060	ENSCATG00000043715	A1CF	100	95.400	Cercocebus_atys
ENSFDAG00000019371	A1CF	100	95.302	ENSCLAG00000010424	A1CF	100	95.302	Chinchilla_lanigera
ENSFDAG00000019371	A1CF	100	93.950	ENSCSAG00000007032	A1CF	100	94.286	Chlorocebus_sabaeus
ENSFDAG00000019371	A1CF	98	89.691	ENSCHOG00000009089	A1CF	98	89.863	Choloepus_hoffmanni
ENSFDAG00000019371	A1CF	100	86.242	ENSCPBG00000026464	A1CF	100	86.074	Chrysemys_picta_bellii
ENSFDAG00000019371	A1CF	100	93.950	ENSCANG00000038032	A1CF	100	94.286	Colobus_angolensis_palliatus
ENSFDAG00000019371	A1CF	100	91.765	ENSCGRG00001017413	A1cf	100	91.765	Cricetulus_griseus_chok1gshd
ENSFDAG00000019371	A1CF	100	91.092	ENSCGRG00000017332	A1cf	100	91.092	Cricetulus_griseus_crigri
ENSFDAG00000019371	A1CF	100	73.134	ENSCSEG00000002361	a1cf	100	74.461	Cynoglossus_semilaevis
ENSFDAG00000019371	A1CF	100	74.752	ENSCVAG00000010520	a1cf	100	76.238	Cyprinodon_variegatus
ENSFDAG00000019371	A1CF	100	78.078	ENSDARG00000002968	a1cf	100	79.427	Danio_rerio
ENSFDAG00000019371	A1CF	100	91.933	ENSDNOG00000002829	A1CF	100	91.933	Dasypus_novemcinctus
ENSFDAG00000019371	A1CF	82	92.029	ENSETEG00000012527	A1CF	81	92.029	Echinops_telfairi
ENSFDAG00000019371	A1CF	100	93.300	ENSEASG00005012924	A1CF	100	93.467	Equus_asinus_asinus
ENSFDAG00000019371	A1CF	100	92.797	ENSECAG00000010424	A1CF	100	92.965	Equus_caballus
ENSFDAG00000019371	A1CF	78	80.828	ENSEEUG00000000013	A1CF	99	78.436	Erinaceus_europaeus
ENSFDAG00000019371	A1CF	100	76.539	ENSELUG00000003159	a1cf	100	77.537	Esox_lucius
ENSFDAG00000019371	A1CF	100	91.652	ENSFCAG00000011179	A1CF	100	92.334	Felis_catus
ENSFDAG00000019371	A1CF	100	86.905	ENSFALG00000013183	A1CF	100	86.735	Ficedula_albicollis
ENSFDAG00000019371	A1CF	100	69.967	ENSFHEG00000019652	a1cf	96	82.031	Fundulus_heteroclitus
ENSFDAG00000019371	A1CF	100	69.637	ENSGMOG00000018943	a1cf	100	69.637	Gadus_morhua
ENSFDAG00000019371	A1CF	95	85.841	ENSGALG00000003765	A1CF	97	85.664	Gallus_gallus
ENSFDAG00000019371	A1CF	100	70.833	ENSGAFG00000014868	a1cf	100	71.833	Gambusia_affinis
ENSFDAG00000019371	A1CF	100	73.026	ENSGACG00000010241	a1cf	100	72.862	Gasterosteus_aculeatus
ENSFDAG00000019371	A1CF	94	85.790	ENSGAGG00000016508	A1CF	97	85.613	Gopherus_agassizii
ENSFDAG00000019371	A1CF	100	94.286	ENSGGOG00000009670	A1CF	100	94.286	Gorilla_gorilla
ENSFDAG00000019371	A1CF	100	74.215	ENSHBUG00000021959	a1cf	100	76.198	Haplochromis_burtoni
ENSFDAG00000019371	A1CF	100	96.471	ENSHGLG00000008955	A1CF	100	96.471	Heterocephalus_glaber_female
ENSFDAG00000019371	A1CF	100	95.798	ENSHGLG00100000518	A1CF	100	95.798	Heterocephalus_glaber_male
ENSFDAG00000019371	A1CF	95	70.619	ENSHCOG00000017669	a1cf	100	71.220	Hippocampus_comes
ENSFDAG00000019371	A1CF	89	81.378	ENSIPUG00000010367	a1cf	96	81.378	Ictalurus_punctatus
ENSFDAG00000019371	A1CF	100	74.959	ENSKMAG00000006568	a1cf	100	75.772	Kryptolebias_marmoratus
ENSFDAG00000019371	A1CF	99	73.736	ENSLBEG00000020994	a1cf	98	75.205	Labrus_bergylta
ENSFDAG00000019371	A1CF	100	82.403	ENSLACG00000008061	A1CF	100	82.403	Latimeria_chalumnae
ENSFDAG00000019371	A1CF	100	79.667	ENSLOCG00000006302	a1cf	100	79.500	Lepisosteus_oculatus
ENSFDAG00000019371	A1CF	100	91.765	ENSLAFG00000015462	A1CF	100	91.765	Loxodonta_africana
ENSFDAG00000019371	A1CF	100	95.400	ENSMFAG00000035948	A1CF	100	95.741	Macaca_fascicularis
ENSFDAG00000019371	A1CF	100	95.400	ENSMMUG00000007077	A1CF	100	95.741	Macaca_mulatta
ENSFDAG00000019371	A1CF	100	95.060	ENSMNEG00000031454	A1CF	100	95.400	Macaca_nemestrina
ENSFDAG00000019371	A1CF	100	93.782	ENSMLEG00000037223	A1CF	100	94.118	Mandrillus_leucophaeus
ENSFDAG00000019371	A1CF	100	73.798	ENSMAMG00000010402	a1cf	100	75.993	Mastacembelus_armatus
ENSFDAG00000019371	A1CF	100	73.667	ENSMZEG00005013245	a1cf	100	74.500	Maylandia_zebra
ENSFDAG00000019371	A1CF	100	86.097	ENSMGAG00000001507	A1CF	100	85.930	Meleagris_gallopavo
ENSFDAG00000019371	A1CF	100	91.429	ENSMAUG00000007422	A1cf	100	91.429	Mesocricetus_auratus
ENSFDAG00000019371	A1CF	100	93.729	ENSMICG00000003377	A1CF	100	94.237	Microcebus_murinus
ENSFDAG00000019371	A1CF	100	91.429	ENSMOCG00000021536	A1cf	100	91.429	Microtus_ochrogaster
ENSFDAG00000019371	A1CF	100	68.159	ENSMMOG00000009422	a1cf	100	69.320	Mola_mola
ENSFDAG00000019371	A1CF	92	89.981	ENSMODG00000016478	A1CF	97	91.221	Monodelphis_domestica
ENSFDAG00000019371	A1CF	100	72.635	ENSMALG00000012992	a1cf	100	72.128	Monopterus_albus
ENSFDAG00000019371	A1CF	100	92.504	MGP_CAROLIEiJ_G0022873	A1cf	100	92.504	Mus_caroli
ENSFDAG00000019371	A1CF	100	92.504	ENSMUSG00000052595	A1cf	99	95.013	Mus_musculus
ENSFDAG00000019371	A1CF	100	91.652	MGP_PahariEiJ_G0014366	A1cf	100	91.652	Mus_pahari
ENSFDAG00000019371	A1CF	100	91.993	MGP_SPRETEiJ_G0023792	A1cf	100	91.993	Mus_spretus
ENSFDAG00000019371	A1CF	100	86.723	ENSMPUG00000016971	A1CF	100	86.891	Mustela_putorius_furo
ENSFDAG00000019371	A1CF	100	92.101	ENSMLUG00000016071	A1CF	100	92.101	Myotis_lucifugus
ENSFDAG00000019371	A1CF	100	93.109	ENSNGAG00000015136	A1cf	100	93.109	Nannospalax_galili
ENSFDAG00000019371	A1CF	100	74.545	ENSNBRG00000001712	a1cf	100	76.529	Neolamprologus_brichardi
ENSFDAG00000019371	A1CF	100	94.958	ENSNLEG00000012028	A1CF	100	94.958	Nomascus_leucogenys
ENSFDAG00000019371	A1CF	94	89.189	ENSMEUG00000015909	A1CF	100	89.189	Notamacropus_eugenii
ENSFDAG00000019371	A1CF	88	83.429	ENSOPRG00000010667	A1CF	97	83.271	Ochotona_princeps
ENSFDAG00000019371	A1CF	100	75.207	ENSONIG00000019105	a1cf	100	76.364	Oreochromis_niloticus
ENSFDAG00000019371	A1CF	78	90.196	ENSOANG00000007360	A1CF	99	90.196	Ornithorhynchus_anatinus
ENSFDAG00000019371	A1CF	100	92.857	ENSOCUG00000011587	A1CF	100	93.537	Oryctolagus_cuniculus
ENSFDAG00000019371	A1CF	100	73.856	ENSORLG00000013342	a1cf	100	73.529	Oryzias_latipes
ENSFDAG00000019371	A1CF	100	74.715	ENSORLG00020000586	a1cf	100	74.715	Oryzias_latipes_hni
ENSFDAG00000019371	A1CF	100	74.551	ENSORLG00015018569	a1cf	100	74.551	Oryzias_latipes_hsok
ENSFDAG00000019371	A1CF	100	75.788	ENSOMEG00000013531	a1cf	100	75.456	Oryzias_melastigma
ENSFDAG00000019371	A1CF	100	91.765	ENSOGAG00000012884	A1CF	100	92.269	Otolemur_garnettii
ENSFDAG00000019371	A1CF	100	92.605	ENSOARG00000013695	A1CF	100	92.605	Ovis_aries
ENSFDAG00000019371	A1CF	97	92.201	ENSPPAG00000028115	A1CF	100	95.951	Pan_paniscus
ENSFDAG00000019371	A1CF	100	90.756	ENSPPRG00000012180	A1CF	100	91.429	Panthera_pardus
ENSFDAG00000019371	A1CF	100	90.756	ENSPTIG00000021223	A1CF	100	91.429	Panthera_tigris_altaica
ENSFDAG00000019371	A1CF	100	95.741	ENSPTRG00000002508	A1CF	100	95.741	Pan_troglodytes
ENSFDAG00000019371	A1CF	100	95.400	ENSPANG00000021988	A1CF	100	95.741	Papio_anubis
ENSFDAG00000019371	A1CF	100	78.536	ENSPKIG00000025176	a1cf	100	78.536	Paramormyrops_kingsleyae
ENSFDAG00000019371	A1CF	100	87.415	ENSPSIG00000010318	A1CF	100	87.075	Pelodiscus_sinensis
ENSFDAG00000019371	A1CF	88	71.760	ENSPMGG00000013359	a1cf	99	68.096	Periophthalmus_magnuspinnatus
ENSFDAG00000019371	A1CF	100	92.101	ENSPEMG00000015021	A1cf	100	92.101	Peromyscus_maniculatus_bairdii
ENSFDAG00000019371	A1CF	100	88.776	ENSPCIG00000002175	A1CF	100	88.776	Phascolarctos_cinereus
ENSFDAG00000019371	A1CF	100	74.756	ENSPFOG00000006683	a1cf	100	76.221	Poecilia_formosa
ENSFDAG00000019371	A1CF	100	74.593	ENSPFOG00000007437	-	100	76.059	Poecilia_formosa
ENSFDAG00000019371	A1CF	100	75.578	ENSPLAG00000001210	-	100	77.063	Poecilia_latipinna
ENSFDAG00000019371	A1CF	100	75.578	ENSPLAG00000000026	a1cf	100	77.063	Poecilia_latipinna
ENSFDAG00000019371	A1CF	100	68.212	ENSPMEG00000000921	a1cf	100	69.702	Poecilia_mexicana
ENSFDAG00000019371	A1CF	100	67.320	ENSPMEG00000015529	-	100	68.791	Poecilia_mexicana
ENSFDAG00000019371	A1CF	100	74.593	ENSPREG00000016298	a1cf	100	76.059	Poecilia_reticulata
ENSFDAG00000019371	A1CF	100	96.082	ENSPPYG00000002819	A1CF	100	96.082	Pongo_abelii
ENSFDAG00000019371	A1CF	79	74.839	ENSPCAG00000006463	A1CF	70	89.796	Procavia_capensis
ENSFDAG00000019371	A1CF	100	92.617	ENSPCOG00000024172	A1CF	100	93.121	Propithecus_coquereli
ENSFDAG00000019371	A1CF	100	73.409	ENSPNYG00000017944	a1cf	100	75.367	Pundamilia_nyererei
ENSFDAG00000019371	A1CF	100	80.201	ENSPNAG00000007704	a1cf	100	80.201	Pygocentrus_nattereri
ENSFDAG00000019371	A1CF	100	92.675	ENSRNOG00000033195	A1cf	100	92.675	Rattus_norvegicus
ENSFDAG00000019371	A1CF	100	87.437	ENSRBIG00000042892	A1CF	100	93.837	Rhinopithecus_bieti
ENSFDAG00000019371	A1CF	100	94.118	ENSRROG00000041398	A1CF	100	94.454	Rhinopithecus_roxellana
ENSFDAG00000019371	A1CF	100	94.454	ENSSBOG00000021930	A1CF	100	95.030	Saimiri_boliviensis_boliviensis
ENSFDAG00000019371	A1CF	100	88.095	ENSSHAG00000005096	A1CF	100	88.095	Sarcophilus_harrisii
ENSFDAG00000019371	A1CF	100	79.328	ENSSFOG00015011774	a1cf	100	79.496	Scleropages_formosus
ENSFDAG00000019371	A1CF	100	73.453	ENSSMAG00000013271	a1cf	100	73.779	Scophthalmus_maximus
ENSFDAG00000019371	A1CF	100	73.964	ENSSDUG00000013930	a1cf	100	74.959	Seriola_dumerili
ENSFDAG00000019371	A1CF	100	69.231	ENSSLDG00000004290	a1cf	100	70.234	Seriola_lalandi_dorsalis
ENSFDAG00000019371	A1CF	95	83.692	ENSSARG00000005940	A1CF	96	83.692	Sorex_araneus
ENSFDAG00000019371	A1CF	95	85.413	ENSSPUG00000006797	A1CF	95	84.710	Sphenodon_punctatus
ENSFDAG00000019371	A1CF	100	93.277	ENSSSCG00000010431	A1CF	100	93.277	Sus_scrofa
ENSFDAG00000019371	A1CF	100	86.288	ENSTGUG00000005090	A1CF	100	86.120	Taeniopygia_guttata
ENSFDAG00000019371	A1CF	100	73.246	ENSTRUG00000001982	a1cf	100	73.246	Takifugu_rubripes
ENSFDAG00000019371	A1CF	99	74.135	ENSTNIG00000003580	a1cf	99	74.135	Tetraodon_nigroviridis
ENSFDAG00000019371	A1CF	97	87.346	ENSTTRG00000013190	A1CF	95	87.346	Tursiops_truncatus
ENSFDAG00000019371	A1CF	100	93.526	ENSUAMG00000020065	A1CF	100	93.697	Ursus_americanus
ENSFDAG00000019371	A1CF	100	91.765	ENSUMAG00000011162	A1CF	100	91.933	Ursus_maritimus
ENSFDAG00000019371	A1CF	87	89.279	ENSVPAG00000006130	A1CF	86	89.279	Vicugna_pacos
ENSFDAG00000019371	A1CF	100	93.015	ENSVVUG00000002504	A1CF	100	93.015	Vulpes_vulpes
ENSFDAG00000019371	A1CF	100	75.833	ENSXETG00000006611	a1cf	100	75.667	Xenopus_tropicalis
ENSFDAG00000019371	A1CF	100	77.076	ENSXCOG00000003302	a1cf	100	78.073	Xiphophorus_couchianus
ENSFDAG00000019371	A1CF	100	76.066	ENSXMAG00000016703	a1cf	100	77.049	Xiphophorus_maculatus