EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000019505 (Gene tree)
Gene ID: 104852177
Gene Symbol: -
Alias: -
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 26670 bases
Position: chrKN124472.1:7640571-7667240
Accession: 104852177
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000012088	MMR_HSR1	PF01926.23	1.2e-05	1	1
ENSFDAP00000012071	MMR_HSR1	PF01926.23	1.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000030338	-	600	-	ENSFDAP00000012071	199 (aa)	-	-
ENSFDAT00000024755	-	381	-	ENSFDAP00000012074	126 (aa)	-	UPI0000208584
ENSFDAT00000024763	-	2030	XM_010609731	ENSFDAP00000012088	205 (aa)	XP_010608033	UPI0000001259
ENSFDAT00000024760	-	417	-	ENSFDAP00000012083	138 (aa)	-	UPI00004704BB

Gene Model

Click here to download ENSFDAG00000019505's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000019505's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000019505	-	58	33.613	ENSFDAG00000009197	-	61	33.058
ENSFDAG00000019505	-	98	42.347	ENSFDAG00000005631	-	91	42.347
ENSFDAG00000019505	-	84	32.143	ENSFDAG00000020602	RHEB	91	32.544
ENSFDAG00000019505	-	85	43.258	ENSFDAG00000015285	RAB37	82	43.258
ENSFDAG00000019505	-	81	46.988	ENSFDAG00000006897	RAB25	78	46.988
ENSFDAG00000019505	-	84	35.028	ENSFDAG00000006760	HRAS	93	35.028
ENSFDAG00000019505	-	96	35.751	ENSFDAG00000005525	RAB6B	94	36.410
ENSFDAG00000019505	-	76	35.484	ENSFDAG00000002113	-	67	35.897
ENSFDAG00000019505	-	80	38.415	ENSFDAG00000021405	NRAS	86	38.415
ENSFDAG00000019505	-	64	62.595	ENSFDAG00000014469	-	99	62.595
ENSFDAG00000019505	-	76	39.623	ENSFDAG00000014776	RAB9B	79	39.623
ENSFDAG00000019505	-	58	31.624	ENSFDAG00000000777	ARL4C	61	31.092
ENSFDAG00000019505	-	99	92.574	ENSFDAG00000010180	-	100	92.574
ENSFDAG00000019505	-	97	47.000	ENSFDAG00000017456	RAB2B	91	49.432
ENSFDAG00000019505	-	84	33.526	ENSFDAG00000014834	RAB23	73	33.526
ENSFDAG00000019505	-	86	43.820	ENSFDAG00000014725	RAB39B	84	43.820
ENSFDAG00000019505	-	68	30.147	ENSFDAG00000006628	ARL3	70	30.147
ENSFDAG00000019505	-	98	42.424	ENSFDAG00000008326	RAB5B	91	42.424
ENSFDAG00000019505	-	89	31.694	ENSFDAG00000007662	RERG	91	32.065
ENSFDAG00000019505	-	78	39.264	ENSFDAG00000008524	RAB7A	79	39.264
ENSFDAG00000019505	-	96	37.755	ENSFDAG00000010948	-	94	38.384
ENSFDAG00000019505	-	81	50.602	ENSFDAG00000014521	RAB30	82	50.602
ENSFDAG00000019505	-	96	39.303	ENSFDAG00000016833	RAB33B	89	39.216
ENSFDAG00000019505	-	80	37.805	ENSFDAG00000000107	KRAS	95	35.912
ENSFDAG00000019505	-	80	48.214	ENSFDAG00000008571	RAB33A	71	48.214
ENSFDAG00000019505	-	76	38.994	ENSFDAG00000006951	RAB9A	79	38.994
ENSFDAG00000019505	-	58	30.769	ENSFDAG00000019045	ARL4A	59	30.252
ENSFDAG00000019505	-	96	33.649	ENSFDAG00000013013	RAB36	78	33.649
ENSFDAG00000019505	-	80	52.727	ENSFDAG00000021495	RAB11A	76	52.727
ENSFDAG00000019505	-	100	46.047	ENSFDAG00000019872	RAB11B	99	46.047
ENSFDAG00000019505	-	98	42.132	ENSFDAG00000021541	RAB5C	90	42.132
ENSFDAG00000019505	-	99	44.554	ENSFDAG00000007443	RAB14	93	44.554
ENSFDAG00000019505	-	79	40.000	ENSFDAG00000016178	RAB34	62	40.373
ENSFDAG00000019505	-	58	31.897	ENSFDAG00000001253	ARL8B	61	31.356
ENSFDAG00000019505	-	58	32.203	ENSFDAG00000000707	ARL14	59	32.203
ENSFDAG00000019505	-	80	35.928	ENSFDAG00000019759	MRAS	80	35.928

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000019505	-	100	100.000	ENSG00000138069	RAB1A	100	100.000	Homo_sapiens
ENSFDAG00000019505	-	99	95.545	ENSAPOG00000008143	-	100	95.545	Acanthochromis_polyacanthus
ENSFDAG00000019505	-	100	100.000	ENSAMEG00000001127	RAB1A	100	100.000	Ailuropoda_melanoleuca
ENSFDAG00000019505	-	99	95.545	ENSAOCG00000020606	-	100	95.545	Amphiprion_ocellaris
ENSFDAG00000019505	-	99	95.545	ENSAPEG00000022488	-	100	95.545	Amphiprion_percula
ENSFDAG00000019505	-	100	100.000	ENSANAG00000020929	RAB1A	100	100.000	Aotus_nancymaae
ENSFDAG00000019505	-	99	96.040	ENSACLG00000003326	-	100	96.040	Astatotilapia_calliptera
ENSFDAG00000019505	-	99	94.554	ENSAMXG00000034850	-	100	94.554	Astyanax_mexicanus
ENSFDAG00000019505	-	100	100.000	ENSBTAG00000016720	RAB1A	100	100.000	Bos_taurus
ENSFDAG00000019505	-	100	100.000	ENSCJAG00000046275	RAB1A	100	100.000	Callithrix_jacchus
ENSFDAG00000019505	-	100	100.000	ENSCAFG00000003187	RAB1A	100	100.000	Canis_familiaris
ENSFDAG00000019505	-	100	100.000	ENSCAFG00020026971	RAB1A	100	100.000	Canis_lupus_dingo
ENSFDAG00000019505	-	96	100.000	ENSCHIG00000014060	RAB1A	96	100.000	Capra_hircus
ENSFDAG00000019505	-	100	98.049	ENSTSYG00000005996	RAB1A	100	100.000	Carlito_syrichta
ENSFDAG00000019505	-	100	100.000	ENSCPOG00000015437	RAB1A	100	100.000	Cavia_porcellus
ENSFDAG00000019505	-	100	100.000	ENSCCAG00000021869	RAB1A	100	100.000	Cebus_capucinus
ENSFDAG00000019505	-	100	100.000	ENSCATG00000030853	RAB1A	100	100.000	Cercocebus_atys
ENSFDAG00000019505	-	100	100.000	ENSCLAG00000014766	RAB1A	100	100.000	Chinchilla_lanigera
ENSFDAG00000019505	-	100	99.512	ENSCPBG00000013243	RAB1A	100	99.512	Chrysemys_picta_bellii
ENSFDAG00000019505	-	100	97.561	ENSCANG00000035916	RAB1A	100	97.561	Colobus_angolensis_palliatus
ENSFDAG00000019505	-	100	100.000	ENSCGRG00001012691	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSFDAG00000019505	-	100	100.000	ENSCGRG00000008456	-	100	100.000	Cricetulus_griseus_crigri
ENSFDAG00000019505	-	100	100.000	ENSDNOG00000018236	RAB1A	100	100.000	Dasypus_novemcinctus
ENSFDAG00000019505	-	100	100.000	ENSDORG00000028628	-	100	100.000	Dipodomys_ordii
ENSFDAG00000019505	-	100	84.466	FBgn0285937	Rab1	100	84.466	Drosophila_melanogaster
ENSFDAG00000019505	-	99	100.000	ENSETEG00000002205	RAB1A	100	100.000	Echinops_telfairi
ENSFDAG00000019505	-	100	100.000	ENSEASG00005007298	RAB1A	100	100.000	Equus_asinus_asinus
ENSFDAG00000019505	-	100	100.000	ENSECAG00000009926	RAB1A	100	100.000	Equus_caballus
ENSFDAG00000019505	-	99	100.000	ENSEEUG00000011721	RAB1A	100	100.000	Erinaceus_europaeus
ENSFDAG00000019505	-	99	95.588	ENSELUG00000012166	RAB1A	96	95.588	Esox_lucius
ENSFDAG00000019505	-	100	100.000	ENSFCAG00000002536	RAB1A	100	100.000	Felis_catus
ENSFDAG00000019505	-	99	97.537	ENSFALG00000013624	RAB1A	99	97.537	Ficedula_albicollis
ENSFDAG00000019505	-	99	94.554	ENSFHEG00000014414	-	100	94.554	Fundulus_heteroclitus
ENSFDAG00000019505	-	100	99.512	ENSGALG00000031582	RAB1A	100	99.512	Gallus_gallus
ENSFDAG00000019505	-	99	94.554	ENSGAFG00000000918	-	100	94.554	Gambusia_affinis
ENSFDAG00000019505	-	100	99.512	ENSGAGG00000006802	RAB1A	100	99.512	Gopherus_agassizii
ENSFDAG00000019505	-	100	100.000	ENSGGOG00000026603	RAB1A	100	100.000	Gorilla_gorilla
ENSFDAG00000019505	-	100	100.000	ENSHGLG00000013585	RAB1A	100	100.000	Heterocephalus_glaber_female
ENSFDAG00000019505	-	99	97.549	ENSHGLG00100007994	RAB1A	99	97.549	Heterocephalus_glaber_male
ENSFDAG00000019505	-	100	100.000	ENSSTOG00000020693	-	100	100.000	Ictidomys_tridecemlineatus
ENSFDAG00000019505	-	96	100.000	ENSJJAG00000014396	Rab1a	100	100.000	Jaculus_jaculus
ENSFDAG00000019505	-	96	95.431	ENSKMAG00000014038	-	93	95.431	Kryptolebias_marmoratus
ENSFDAG00000019505	-	99	95.050	ENSLBEG00000028426	RAB1A	100	95.050	Labrus_bergylta
ENSFDAG00000019505	-	100	98.537	ENSLACG00000012869	RAB1A	100	98.537	Latimeria_chalumnae
ENSFDAG00000019505	-	100	100.000	ENSLAFG00000016666	RAB1A	100	100.000	Loxodonta_africana
ENSFDAG00000019505	-	100	100.000	ENSMFAG00000046246	RAB1A	100	100.000	Macaca_fascicularis
ENSFDAG00000019505	-	96	100.000	ENSMMUG00000021721	RAB1A	91	100.000	Macaca_mulatta
ENSFDAG00000019505	-	95	99.485	ENSMNEG00000028414	-	97	99.485	Macaca_nemestrina
ENSFDAG00000019505	-	100	100.000	ENSMLEG00000042535	RAB1A	100	100.000	Mandrillus_leucophaeus
ENSFDAG00000019505	-	99	96.040	ENSMZEG00005013959	-	100	96.040	Maylandia_zebra
ENSFDAG00000019505	-	96	99.492	ENSMGAG00000004611	RAB1A	98	99.492	Meleagris_gallopavo
ENSFDAG00000019505	-	100	99.512	ENSMAUG00000012156	Rab1a	100	99.512	Mesocricetus_auratus
ENSFDAG00000019505	-	100	100.000	ENSMICG00000012587	RAB1A	100	100.000	Microcebus_murinus
ENSFDAG00000019505	-	100	99.512	ENSMOCG00000017022	Rab1a	100	99.512	Microtus_ochrogaster
ENSFDAG00000019505	-	99	93.564	ENSMMOG00000018709	RAB1A	100	93.564	Mola_mola
ENSFDAG00000019505	-	100	99.512	ENSMODG00000003340	RAB1A	100	99.512	Monodelphis_domestica
ENSFDAG00000019505	-	100	100.000	MGP_CAROLIEiJ_G0016115	Rab1a	100	100.000	Mus_caroli
ENSFDAG00000019505	-	100	100.000	ENSMUSG00000020149	Rab1a	100	100.000	Mus_musculus
ENSFDAG00000019505	-	100	100.000	MGP_PahariEiJ_G0016776	Rab1a	100	100.000	Mus_pahari
ENSFDAG00000019505	-	100	100.000	MGP_SPRETEiJ_G0016958	Rab1a	100	100.000	Mus_spretus
ENSFDAG00000019505	-	100	100.000	ENSMPUG00000006139	RAB1A	82	100.000	Mustela_putorius_furo
ENSFDAG00000019505	-	100	100.000	ENSMLUG00000009489	RAB1A	100	100.000	Myotis_lucifugus
ENSFDAG00000019505	-	100	100.000	ENSNGAG00000005838	Rab1a	100	100.000	Nannospalax_galili
ENSFDAG00000019505	-	99	96.040	ENSNBRG00000020492	-	100	96.040	Neolamprologus_brichardi
ENSFDAG00000019505	-	96	100.000	ENSOPRG00000006595	RAB1A	100	100.000	Ochotona_princeps
ENSFDAG00000019505	-	100	97.487	ENSODEG00000011248	-	100	97.487	Octodon_degus
ENSFDAG00000019505	-	99	93.627	ENSONIG00000006819	-	100	93.627	Oreochromis_niloticus
ENSFDAG00000019505	-	100	99.512	ENSOANG00000012438	RAB1A	100	99.512	Ornithorhynchus_anatinus
ENSFDAG00000019505	-	100	100.000	ENSOCUG00000017003	RAB1A	100	100.000	Oryctolagus_cuniculus
ENSFDAG00000019505	-	100	100.000	ENSOGAG00000026181	RAB1A	100	100.000	Otolemur_garnettii
ENSFDAG00000019505	-	96	100.000	ENSOARG00000019997	RAB1A	97	100.000	Ovis_aries
ENSFDAG00000019505	-	99	100.000	ENSPPAG00000030253	RAB1A	100	100.000	Pan_paniscus
ENSFDAG00000019505	-	100	100.000	ENSPPRG00000025077	RAB1A	100	100.000	Panthera_pardus
ENSFDAG00000019505	-	96	100.000	ENSPTIG00000013471	RAB1A	97	100.000	Panthera_tigris_altaica
ENSFDAG00000019505	-	100	100.000	ENSPTRG00000011989	RAB1A	100	100.000	Pan_troglodytes
ENSFDAG00000019505	-	100	100.000	ENSPANG00000010485	RAB1A	100	100.000	Papio_anubis
ENSFDAG00000019505	-	99	96.552	ENSPSIG00000008028	RAB1A	99	96.552	Pelodiscus_sinensis
ENSFDAG00000019505	-	99	95.588	ENSPMGG00000021015	-	99	95.588	Periophthalmus_magnuspinnatus
ENSFDAG00000019505	-	100	100.000	ENSPEMG00000009340	Rab1a	100	100.000	Peromyscus_maniculatus_bairdii
ENSFDAG00000019505	-	100	99.512	ENSPCIG00000023212	RAB1A	100	99.512	Phascolarctos_cinereus
ENSFDAG00000019505	-	99	93.137	ENSPFOG00000000498	-	99	93.137	Poecilia_formosa
ENSFDAG00000019505	-	99	94.059	ENSPLAG00000015592	-	100	94.059	Poecilia_latipinna
ENSFDAG00000019505	-	99	94.059	ENSPMEG00000005288	-	100	94.059	Poecilia_mexicana
ENSFDAG00000019505	-	100	100.000	ENSPPYG00000012360	RAB1A	100	100.000	Pongo_abelii
ENSFDAG00000019505	-	100	100.000	ENSPCOG00000017244	RAB1A	100	100.000	Propithecus_coquereli
ENSFDAG00000019505	-	99	96.040	ENSPNYG00000015841	-	100	96.040	Pundamilia_nyererei
ENSFDAG00000019505	-	100	100.000	ENSRNOG00000004992	Rab1a	100	100.000	Rattus_norvegicus
ENSFDAG00000019505	-	100	100.000	ENSSBOG00000023732	RAB1A	100	100.000	Saimiri_boliviensis_boliviensis
ENSFDAG00000019505	-	98	98.010	ENSSHAG00000003597	RAB1A	98	98.010	Sarcophilus_harrisii
ENSFDAG00000019505	-	99	95.545	ENSSMAG00000021049	-	100	95.545	Scophthalmus_maximus
ENSFDAG00000019505	-	99	96.040	ENSSDUG00000022535	RAB1A	100	96.040	Seriola_dumerili
ENSFDAG00000019505	-	100	99.512	ENSSPUG00000012822	RAB1A	100	99.512	Sphenodon_punctatus
ENSFDAG00000019505	-	99	95.545	ENSSPAG00000012564	-	100	95.545	Stegastes_partitus
ENSFDAG00000019505	-	100	100.000	ENSSSCG00000008359	RAB1A	100	100.000	Sus_scrofa
ENSFDAG00000019505	-	100	97.073	ENSTGUG00000002328	RAB1A	100	97.073	Taeniopygia_guttata
ENSFDAG00000019505	-	99	95.050	ENSTRUG00000024994	RAB1A	100	95.050	Takifugu_rubripes
ENSFDAG00000019505	-	96	100.000	ENSUMAG00000021038	RAB1A	99	100.000	Ursus_maritimus
ENSFDAG00000019505	-	97	99.495	ENSVPAG00000005640	RAB1A	99	99.495	Vicugna_pacos
ENSFDAG00000019505	-	100	100.000	ENSVVUG00000027588	RAB1A	100	100.000	Vulpes_vulpes
ENSFDAG00000019505	-	99	94.554	ENSXMAG00000015776	-	100	94.554	Xiphophorus_maculatus