EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000019555 (Gene tree)
Gene ID: 104851972
Gene Symbol: -
Alias: -
Full Name: gametocyte-specific factor 1-like
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 3087 bases
Position: chrKN124398.1:1801286-1804372
Accession: 104851972
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000012160	zf-U11-48K	PF05253.12	6.2e-19	1	2
ENSFDAP00000012160	zf-U11-48K	PF05253.12	6.2e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000024829	-	450	XM_010609407	ENSFDAP00000012160	149 (aa)	XP_010607709	-

Gene Model

Click here to download ENSFDAG00000019555's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000019555's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000019555	-	79	33.333	ENSFDAG00000009383	GTSF1	69	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000019555	-	98	77.027	ENSAMEG00000000958	-	97	77.027	Ailuropoda_melanoleuca
ENSFDAG00000019555	-	100	74.194	ENSCAFG00000006463	-	100	74.194	Canis_familiaris
ENSFDAG00000019555	-	99	74.667	ENSCAFG00020020371	-	95	74.667	Canis_lupus_dingo
ENSFDAG00000019555	-	100	80.795	ENSCPOG00000023851	-	100	80.795	Cavia_porcellus
ENSFDAG00000019555	-	97	77.551	ENSCLAG00000008579	-	100	77.551	Chinchilla_lanigera
ENSFDAG00000019555	-	100	64.935	ENSCGRG00001016136	Gtsf2	100	64.935	Cricetulus_griseus_chok1gshd
ENSFDAG00000019555	-	100	64.935	ENSCGRG00000012950	Gtsf2	100	64.935	Cricetulus_griseus_crigri
ENSFDAG00000019555	-	99	71.812	ENSDORG00000026087	Gtsf2	97	71.812	Dipodomys_ordii
ENSFDAG00000019555	-	71	69.159	ENSEASG00005010262	-	98	69.159	Equus_asinus_asinus
ENSFDAG00000019555	-	71	76.415	ENSECAG00000014413	-	98	76.415	Equus_caballus
ENSFDAG00000019555	-	72	75.926	ENSFCAG00000031316	-	92	75.926	Felis_catus
ENSFDAG00000019555	-	95	90.141	ENSHGLG00000002798	-	97	88.591	Heterocephalus_glaber_female
ENSFDAG00000019555	-	95	90.141	ENSHGLG00100012359	-	97	88.591	Heterocephalus_glaber_male
ENSFDAG00000019555	-	99	72.483	ENSSTOG00000030158	-	99	72.483	Ictidomys_tridecemlineatus
ENSFDAG00000019555	-	100	68.182	ENSJJAG00000016320	Gtsf2	100	68.182	Jaculus_jaculus
ENSFDAG00000019555	-	98	68.027	ENSMAUG00000017189	-	91	68.027	Mesocricetus_auratus
ENSFDAG00000019555	-	53	73.418	ENSMAUG00000014687	-	87	73.418	Mesocricetus_auratus
ENSFDAG00000019555	-	100	67.532	ENSMOCG00000014770	Gtsf2	100	67.532	Microtus_ochrogaster
ENSFDAG00000019555	-	100	64.935	MGP_CAROLIEiJ_G0020380	Gtsf2	100	64.935	Mus_caroli
ENSFDAG00000019555	-	100	65.584	ENSMUSG00000053508	Gtsf2	100	65.584	Mus_musculus
ENSFDAG00000019555	-	100	65.584	MGP_PahariEiJ_G0020379	Gtsf2	100	65.584	Mus_pahari
ENSFDAG00000019555	-	100	65.584	MGP_SPRETEiJ_G0021273	Gtsf2	100	65.584	Mus_spretus
ENSFDAG00000019555	-	100	75.484	ENSMPUG00000005664	-	100	75.484	Mustela_putorius_furo
ENSFDAG00000019555	-	100	62.338	ENSNGAG00000008752	Gtsf2	100	62.338	Nannospalax_galili
ENSFDAG00000019555	-	93	77.698	ENSODEG00000013228	-	100	75.333	Octodon_degus
ENSFDAG00000019555	-	85	77.165	ENSPPRG00000004157	-	99	77.165	Panthera_pardus
ENSFDAG00000019555	-	85	77.165	ENSPTIG00000020670	-	99	77.165	Panthera_tigris_altaica
ENSFDAG00000019555	-	100	66.000	ENSPEMG00000014641	-	100	66.000	Peromyscus_maniculatus_bairdii
ENSFDAG00000019555	-	100	70.130	ENSPEMG00000010828	-	100	70.130	Peromyscus_maniculatus_bairdii
ENSFDAG00000019555	-	100	66.234	ENSRNOG00000036830	RGD1563200	100	66.234	Rattus_norvegicus
ENSFDAG00000019555	-	99	60.403	ENSSSCG00000000296	-	90	60.403	Sus_scrofa
ENSFDAG00000019555	-	70	80.952	ENSUAMG00000021668	-	96	80.952	Ursus_americanus
ENSFDAG00000019555	-	70	80.952	ENSUMAG00000011281	-	96	80.952	Ursus_maritimus
ENSFDAG00000019555	-	70	80.000	ENSVVUG00000023684	-	96	80.000	Vulpes_vulpes