EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000019806 (Gene tree)
Gene ID: 104870330
Gene Symbol: SF3B2
Alias: Cus1|SAP145|SF3b1|SF3b145
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 26225 bases
Position: chrKN122776.1:5635155-5661379
Accession: 104870330
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000012444	DUF382	PF04037.13	9.3e-60	1	1
ENSFDAP00000012459	DUF382	PF04037.13	9.6e-60	1	1
ENSFDAP00000012444	SAP	PF02037.27	2.5e-08	1	1
ENSFDAP00000012459	SAP	PF02037.27	2.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000025156	SF3B2-201	4371	XM_010635915	ENSFDAP00000012459	900 (aa)	XP_010634217	UPI00054032DC
ENSFDAT00000030407	SF3B2-202	3077	XM_010635917	ENSFDAP00000012444	883 (aa)	XP_010634219	A0A091DDN2

Gene Model

Click here to download ENSFDAG00000019806's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000019806's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000019806	SF3B2	100	97.556	ENSG00000087365	SF3B2	99	99.683	Homo_sapiens
ENSFDAG00000019806	SF3B2	95	69.595	ENSAPOG00000001974	sf3b2	82	72.715	Acanthochromis_polyacanthus
ENSFDAG00000019806	SF3B2	100	97.238	ENSAMEG00000017206	SF3B2	100	97.238	Ailuropoda_melanoleuca
ENSFDAG00000019806	SF3B2	97	67.386	ENSACIG00000000624	sf3b2	87	72.692	Amphilophus_citrinellus
ENSFDAG00000019806	SF3B2	97	70.045	ENSAOCG00000009207	sf3b2	86	74.003	Amphiprion_ocellaris
ENSFDAG00000019806	SF3B2	97	69.595	ENSAPEG00000002762	sf3b2	87	71.465	Amphiprion_percula
ENSFDAG00000019806	SF3B2	100	65.322	ENSACAG00000008615	SF3B2	100	65.604	Anolis_carolinensis
ENSFDAG00000019806	SF3B2	100	97.669	ENSANAG00000029120	SF3B2	100	97.669	Aotus_nancymaae
ENSFDAG00000019806	SF3B2	86	72.506	ENSACLG00000014771	sf3b2	97	68.284	Astatotilapia_calliptera
ENSFDAG00000019806	SF3B2	84	72.021	ENSAMXG00000007929	sf3b2	86	77.237	Astyanax_mexicanus
ENSFDAG00000019806	SF3B2	100	96.903	ENSBTAG00000002778	SF3B2	100	96.903	Bos_taurus
ENSFDAG00000019806	SF3B2	60	50.532	WBGene00021004	sftb-2	89	51.825	Caenorhabditis_elegans
ENSFDAG00000019806	SF3B2	100	97.780	ENSCJAG00000001656	SF3B2	100	97.780	Callithrix_jacchus
ENSFDAG00000019806	SF3B2	100	97.342	ENSCAFG00000013033	SF3B2	100	97.342	Canis_familiaris
ENSFDAG00000019806	SF3B2	100	97.342	ENSCAFG00020015382	SF3B2	100	97.342	Canis_lupus_dingo
ENSFDAG00000019806	SF3B2	100	97.010	ENSCHIG00000011211	SF3B2	100	97.010	Capra_hircus
ENSFDAG00000019806	SF3B2	100	97.556	ENSTSYG00000000959	SF3B2	100	97.556	Carlito_syrichta
ENSFDAG00000019806	SF3B2	61	98.947	ENSCAPG00000006065	SF3B2	93	100.000	Cavia_aperea
ENSFDAG00000019806	SF3B2	91	97.753	ENSCPOG00000008294	SF3B2	100	97.753	Cavia_porcellus
ENSFDAG00000019806	SF3B2	100	97.780	ENSCCAG00000035256	SF3B2	100	97.780	Cebus_capucinus
ENSFDAG00000019806	SF3B2	100	97.667	ENSCATG00000042240	SF3B2	100	97.667	Cercocebus_atys
ENSFDAG00000019806	SF3B2	100	98.867	ENSCLAG00000016852	SF3B2	100	98.867	Chinchilla_lanigera
ENSFDAG00000019806	SF3B2	100	97.667	ENSCSAG00000008121	SF3B2	100	97.667	Chlorocebus_sabaeus
ENSFDAG00000019806	SF3B2	91	99.485	ENSCHOG00000001476	SF3B2	92	91.237	Choloepus_hoffmanni
ENSFDAG00000019806	SF3B2	85	80.649	ENSCPBG00000022465	SF3B2	87	88.125	Chrysemys_picta_bellii
ENSFDAG00000019806	SF3B2	73	59.877	ENSCING00000005665	-	99	60.188	Ciona_intestinalis
ENSFDAG00000019806	SF3B2	70	60.597	ENSCSAVG00000002029	-	99	59.621	Ciona_savignyi
ENSFDAG00000019806	SF3B2	100	97.667	ENSCANG00000039680	SF3B2	100	97.667	Colobus_angolensis_palliatus
ENSFDAG00000019806	SF3B2	100	97.622	ENSCGRG00001015741	Sf3b2	100	97.622	Cricetulus_griseus_chok1gshd
ENSFDAG00000019806	SF3B2	100	97.622	ENSCGRG00000018110	Sf3b2	100	97.622	Cricetulus_griseus_crigri
ENSFDAG00000019806	SF3B2	75	74.776	ENSCSEG00000000230	sf3b2	78	78.145	Cynoglossus_semilaevis
ENSFDAG00000019806	SF3B2	97	67.664	ENSCVAG00000003357	sf3b2	85	73.413	Cyprinodon_variegatus
ENSFDAG00000019806	SF3B2	82	72.629	ENSDARG00000018049	sf3b2	86	72.418	Danio_rerio
ENSFDAG00000019806	SF3B2	100	95.349	ENSDNOG00000009484	SF3B2	100	96.020	Dasypus_novemcinctus
ENSFDAG00000019806	SF3B2	100	96.946	ENSDORG00000002495	Sf3b2	100	96.946	Dipodomys_ordii
ENSFDAG00000019806	SF3B2	84	88.889	ENSETEG00000020284	SF3B2	85	88.759	Echinops_telfairi
ENSFDAG00000019806	SF3B2	98	58.792	ENSEBUG00000013703	sf3b2	99	59.891	Eptatretus_burgeri
ENSFDAG00000019806	SF3B2	100	96.792	ENSEASG00005004508	SF3B2	100	96.792	Equus_asinus_asinus
ENSFDAG00000019806	SF3B2	100	96.792	ENSECAG00000024461	SF3B2	100	96.792	Equus_caballus
ENSFDAG00000019806	SF3B2	62	100.000	ENSEEUG00000014278	-	60	100.000	Erinaceus_europaeus
ENSFDAG00000019806	SF3B2	97	67.138	ENSELUG00000005586	sf3b2	86	72.035	Esox_lucius
ENSFDAG00000019806	SF3B2	100	97.453	ENSFCAG00000013289	SF3B2	100	97.453	Felis_catus
ENSFDAG00000019806	SF3B2	80	70.028	ENSFALG00000014653	SF3B2	98	69.004	Ficedula_albicollis
ENSFDAG00000019806	SF3B2	84	70.850	ENSFHEG00000020968	sf3b2	86	72.621	Fundulus_heteroclitus
ENSFDAG00000019806	SF3B2	73	77.626	ENSGMOG00000012131	sf3b2	96	81.005	Gadus_morhua
ENSFDAG00000019806	SF3B2	97	68.558	ENSGAFG00000001675	sf3b2	86	72.120	Gambusia_affinis
ENSFDAG00000019806	SF3B2	73	78.988	ENSGACG00000019012	sf3b2	96	80.031	Gasterosteus_aculeatus
ENSFDAG00000019806	SF3B2	100	77.605	ENSGAGG00000023916	SF3B2	100	81.243	Gopherus_agassizii
ENSFDAG00000019806	SF3B2	100	97.556	ENSGGOG00000028448	SF3B2	100	99.717	Gorilla_gorilla
ENSFDAG00000019806	SF3B2	97	65.979	ENSHBUG00000017349	sf3b2	97	68.284	Haplochromis_burtoni
ENSFDAG00000019806	SF3B2	100	98.754	ENSHGLG00000010807	SF3B2	100	98.754	Heterocephalus_glaber_female
ENSFDAG00000019806	SF3B2	100	98.778	ENSHGLG00100006361	SF3B2	100	98.778	Heterocephalus_glaber_male
ENSFDAG00000019806	SF3B2	97	66.180	ENSHCOG00000016203	sf3b2	97	65.359	Hippocampus_comes
ENSFDAG00000019806	SF3B2	97	64.838	ENSIPUG00000009383	sf3b2	85	71.768	Ictalurus_punctatus
ENSFDAG00000019806	SF3B2	100	98.111	ENSSTOG00000028892	SF3B2	100	98.111	Ictidomys_tridecemlineatus
ENSFDAG00000019806	SF3B2	100	98.301	ENSJJAG00000018193	Sf3b2	100	98.301	Jaculus_jaculus
ENSFDAG00000019806	SF3B2	60	87.970	ENSKMAG00000020181	sf3b2	84	72.977	Kryptolebias_marmoratus
ENSFDAG00000019806	SF3B2	97	68.565	ENSLBEG00000027739	sf3b2	88	78.110	Labrus_bergylta
ENSFDAG00000019806	SF3B2	79	80.465	ENSLACG00000010429	SF3B2	79	81.202	Latimeria_chalumnae
ENSFDAG00000019806	SF3B2	100	96.501	ENSLAFG00000002128	SF3B2	100	96.501	Loxodonta_africana
ENSFDAG00000019806	SF3B2	100	97.558	ENSMFAG00000003064	SF3B2	100	97.558	Macaca_fascicularis
ENSFDAG00000019806	SF3B2	100	93.333	ENSMMUG00000011743	SF3B2	100	93.333	Macaca_mulatta
ENSFDAG00000019806	SF3B2	100	97.556	ENSMNEG00000034437	SF3B2	100	97.556	Macaca_nemestrina
ENSFDAG00000019806	SF3B2	100	97.444	ENSMLEG00000029373	SF3B2	100	97.444	Mandrillus_leucophaeus
ENSFDAG00000019806	SF3B2	84	74.008	ENSMAMG00000014103	sf3b2	86	73.571	Mastacembelus_armatus
ENSFDAG00000019806	SF3B2	86	72.506	ENSMZEG00005020789	sf3b2	86	74.223	Maylandia_zebra
ENSFDAG00000019806	SF3B2	65	98.333	ENSMAUG00000017040	Sf3b2	100	98.333	Mesocricetus_auratus
ENSFDAG00000019806	SF3B2	100	93.792	ENSMICG00000016942	-	97	93.792	Microcebus_murinus
ENSFDAG00000019806	SF3B2	100	97.222	ENSMICG00000008565	-	100	97.222	Microcebus_murinus
ENSFDAG00000019806	SF3B2	100	97.508	ENSMOCG00000003136	Sf3b2	100	97.508	Microtus_ochrogaster
ENSFDAG00000019806	SF3B2	97	66.254	ENSMMOG00000012928	sf3b2	86	71.503	Mola_mola
ENSFDAG00000019806	SF3B2	72	87.598	ENSMODG00000025020	-	99	86.656	Monodelphis_domestica
ENSFDAG00000019806	SF3B2	85	90.501	ENSMODG00000008490	-	92	91.942	Monodelphis_domestica
ENSFDAG00000019806	SF3B2	86	68.211	ENSMALG00000015137	sf3b2	76	78.988	Monopterus_albus
ENSFDAG00000019806	SF3B2	100	96.829	MGP_CAROLIEiJ_G0022539	Sf3b2	100	96.829	Mus_caroli
ENSFDAG00000019806	SF3B2	100	97.395	ENSMUSG00000024853	Sf3b2	100	97.395	Mus_musculus
ENSFDAG00000019806	SF3B2	100	97.395	MGP_PahariEiJ_G0014036	Sf3b2	100	97.395	Mus_pahari
ENSFDAG00000019806	SF3B2	100	97.282	MGP_SPRETEiJ_G0023453	Sf3b2	100	97.282	Mus_spretus
ENSFDAG00000019806	SF3B2	100	97.231	ENSMPUG00000011349	SF3B2	100	97.231	Mustela_putorius_furo
ENSFDAG00000019806	SF3B2	100	96.128	ENSMLUG00000011136	SF3B2	100	96.128	Myotis_lucifugus
ENSFDAG00000019806	SF3B2	100	97.735	ENSNGAG00000012103	Sf3b2	100	97.735	Nannospalax_galili
ENSFDAG00000019806	SF3B2	100	91.749	ENSNLEG00000006007	SF3B2	100	90.471	Nomascus_leucogenys
ENSFDAG00000019806	SF3B2	87	93.466	ENSMEUG00000000019	SF3B2	91	93.466	Notamacropus_eugenii
ENSFDAG00000019806	SF3B2	100	95.017	ENSODEG00000017764	SF3B2	100	95.017	Octodon_degus
ENSFDAG00000019806	SF3B2	97	67.673	ENSONIG00000013068	sf3b2	97	69.000	Oreochromis_niloticus
ENSFDAG00000019806	SF3B2	87	80.867	ENSOANG00000012482	SF3B2	97	81.383	Ornithorhynchus_anatinus
ENSFDAG00000019806	SF3B2	62	64.652	ENSOCUG00000024154	-	100	64.286	Oryctolagus_cuniculus
ENSFDAG00000019806	SF3B2	100	92.111	ENSOCUG00000015722	-	100	92.111	Oryctolagus_cuniculus
ENSFDAG00000019806	SF3B2	97	67.303	ENSORLG00000008235	sf3b2	85	71.984	Oryzias_latipes
ENSFDAG00000019806	SF3B2	97	67.303	ENSORLG00020005357	sf3b2	88	71.984	Oryzias_latipes_hni
ENSFDAG00000019806	SF3B2	97	67.416	ENSORLG00015022454	sf3b2	82	77.394	Oryzias_latipes_hsok
ENSFDAG00000019806	SF3B2	97	65.804	ENSOMEG00000017480	sf3b2	88	71.466	Oryzias_melastigma
ENSFDAG00000019806	SF3B2	100	91.444	ENSOGAG00000005799	SF3B2	100	91.556	Otolemur_garnettii
ENSFDAG00000019806	SF3B2	100	93.123	ENSOARG00000002125	SF3B2	100	97.308	Ovis_aries
ENSFDAG00000019806	SF3B2	100	97.556	ENSPPAG00000007359	SF3B2	100	97.556	Pan_paniscus
ENSFDAG00000019806	SF3B2	100	97.453	ENSPPRG00000013334	SF3B2	100	97.453	Panthera_pardus
ENSFDAG00000019806	SF3B2	100	97.342	ENSPTIG00000015022	SF3B2	100	97.342	Panthera_tigris_altaica
ENSFDAG00000019806	SF3B2	100	97.556	ENSPTRG00000003912	SF3B2	100	97.556	Pan_troglodytes
ENSFDAG00000019806	SF3B2	100	97.667	ENSPANG00000008593	SF3B2	100	97.667	Papio_anubis
ENSFDAG00000019806	SF3B2	97	67.753	ENSPKIG00000016576	sf3b2	98	68.380	Paramormyrops_kingsleyae
ENSFDAG00000019806	SF3B2	93	80.355	ENSPSIG00000003158	SF3B2	100	88.045	Pelodiscus_sinensis
ENSFDAG00000019806	SF3B2	85	66.926	ENSPMGG00000000819	sf3b2	86	68.010	Periophthalmus_magnuspinnatus
ENSFDAG00000019806	SF3B2	93	83.049	ENSPEMG00000015451	-	100	82.582	Peromyscus_maniculatus_bairdii
ENSFDAG00000019806	SF3B2	100	97.848	ENSPEMG00000015437	Sf3b2	100	97.848	Peromyscus_maniculatus_bairdii
ENSFDAG00000019806	SF3B2	85	90.092	ENSPCIG00000008381	SF3B2	100	89.258	Phascolarctos_cinereus
ENSFDAG00000019806	SF3B2	97	67.654	ENSPFOG00000002552	sf3b2	86	73.072	Poecilia_formosa
ENSFDAG00000019806	SF3B2	97	67.768	ENSPLAG00000001471	sf3b2	86	73.203	Poecilia_latipinna
ENSFDAG00000019806	SF3B2	97	67.617	ENSPMEG00000013180	sf3b2	86	73.037	Poecilia_mexicana
ENSFDAG00000019806	SF3B2	84	72.237	ENSPREG00000002665	sf3b2	86	72.526	Poecilia_reticulata
ENSFDAG00000019806	SF3B2	75	95.266	ENSPPYG00000003034	-	99	95.266	Pongo_abelii
ENSFDAG00000019806	SF3B2	100	96.124	ENSPCAG00000005129	SF3B2	100	96.124	Procavia_capensis
ENSFDAG00000019806	SF3B2	100	97.333	ENSPCOG00000025375	SF3B2	100	97.333	Propithecus_coquereli
ENSFDAG00000019806	SF3B2	55	99.561	ENSPVAG00000005466	-	80	99.561	Pteropus_vampyrus
ENSFDAG00000019806	SF3B2	55	99.299	ENSPVAG00000016975	-	55	99.299	Pteropus_vampyrus
ENSFDAG00000019806	SF3B2	81	72.902	ENSPNYG00000023594	sf3b2	92	72.988	Pundamilia_nyererei
ENSFDAG00000019806	SF3B2	97	68.652	ENSPNAG00000001891	sf3b2	86	71.648	Pygocentrus_nattereri
ENSFDAG00000019806	SF3B2	100	97.282	ENSRNOG00000020412	Sf3b2	100	97.282	Rattus_norvegicus
ENSFDAG00000019806	SF3B2	100	97.556	ENSRBIG00000034065	SF3B2	100	97.556	Rhinopithecus_bieti
ENSFDAG00000019806	SF3B2	100	97.556	ENSRROG00000034496	SF3B2	100	97.556	Rhinopithecus_roxellana
ENSFDAG00000019806	SF3B2	100	93.414	ENSSBOG00000026337	SF3B2	100	93.414	Saimiri_boliviensis_boliviensis
ENSFDAG00000019806	SF3B2	85	81.865	ENSSHAG00000010933	-	100	81.679	Sarcophilus_harrisii
ENSFDAG00000019806	SF3B2	96	69.444	ENSSHAG00000018043	-	100	68.714	Sarcophilus_harrisii
ENSFDAG00000019806	SF3B2	97	67.735	ENSSFOG00015021125	sf3b2	97	69.473	Scleropages_formosus
ENSFDAG00000019806	SF3B2	97	68.521	ENSSMAG00000004079	sf3b2	88	74.515	Scophthalmus_maximus
ENSFDAG00000019806	SF3B2	59	88.235	ENSSDUG00000008499	sf3b2	85	69.924	Seriola_dumerili
ENSFDAG00000019806	SF3B2	59	88.235	ENSSLDG00000006838	sf3b2	86	74.319	Seriola_lalandi_dorsalis
ENSFDAG00000019806	SF3B2	53	99.206	ENSSARG00000003707	-	53	99.206	Sorex_araneus
ENSFDAG00000019806	SF3B2	100	80.509	ENSSPUG00000009198	SF3B2	85	84.728	Sphenodon_punctatus
ENSFDAG00000019806	SF3B2	97	68.287	ENSSPAG00000004406	sf3b2	86	74.055	Stegastes_partitus
ENSFDAG00000019806	SF3B2	100	96.678	ENSSSCG00000012957	SF3B2	100	96.678	Sus_scrofa
ENSFDAG00000019806	SF3B2	97	56.122	ENSTRUG00000007611	sf3b2	88	71.851	Takifugu_rubripes
ENSFDAG00000019806	SF3B2	86	69.701	ENSTNIG00000007441	sf3b2	88	69.007	Tetraodon_nigroviridis
ENSFDAG00000019806	SF3B2	91	96.512	ENSTBEG00000004258	SF3B2	82	99.286	Tupaia_belangeri
ENSFDAG00000019806	SF3B2	100	97.010	ENSTTRG00000014339	SF3B2	100	97.010	Tursiops_truncatus
ENSFDAG00000019806	SF3B2	100	95.465	ENSUAMG00000020754	SF3B2	99	96.723	Ursus_americanus
ENSFDAG00000019806	SF3B2	100	97.453	ENSUMAG00000010994	SF3B2	100	97.453	Ursus_maritimus
ENSFDAG00000019806	SF3B2	67	99.153	ENSVPAG00000008695	SF3B2	72	99.153	Vicugna_pacos
ENSFDAG00000019806	SF3B2	100	97.231	ENSVVUG00000027029	SF3B2	100	97.231	Vulpes_vulpes
ENSFDAG00000019806	SF3B2	87	71.337	ENSXETG00000008422	sf3b2	81	79.394	Xenopus_tropicalis
ENSFDAG00000019806	SF3B2	75	72.222	ENSXCOG00000008943	sf3b2	93	70.917	Xiphophorus_couchianus
ENSFDAG00000019806	SF3B2	60	87.736	ENSXMAG00000008467	sf3b2	86	71.354	Xiphophorus_maculatus