EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000019897 (Gene tree)
Gene ID: 104868626
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 20853 bases
Position: chrKN122609.1:3677441-3698293
Accession: 104868626
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000012538	zf-C3HC	PF07967.13	5.5e-40	1	1
ENSFDAP00000012539	zf-C3HC	PF07967.13	2.5e-39	1	1
ENSFDAP00000012539	Rsm1	PF08600.10	1.7e-15	1	2
ENSFDAP00000012539	Rsm1	PF08600.10	1.7e-15	2	2
ENSFDAP00000012538	Rsm1	PF08600.10	1.8e-15	1	2
ENSFDAP00000012538	Rsm1	PF08600.10	1.8e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000030426	ZC3HC1-201	1293	-	ENSFDAP00000012538	430 (aa)	-	-
ENSFDAT00000030429	ZC3HC1-202	1905	XM_010633500	ENSFDAP00000012539	501 (aa)	XP_010631802	UPI00053FAE8E

Gene Model

Click here to download ENSFDAG00000019897's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000019897's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000019897	ZC3HC1	99	87.674	ENSG00000091732	ZC3HC1	99	87.674	Homo_sapiens
ENSFDAG00000019897	ZC3HC1	94	47.605	ENSAPOG00000009078	zc3hc1	95	43.662	Acanthochromis_polyacanthus
ENSFDAG00000019897	ZC3HC1	100	86.310	ENSAMEG00000005425	ZC3HC1	100	86.310	Ailuropoda_melanoleuca
ENSFDAG00000019897	ZC3HC1	95	41.650	ENSACIG00000019513	zc3hc1	95	40.681	Amphilophus_citrinellus
ENSFDAG00000019897	ZC3HC1	93	50.333	ENSAOCG00000024310	zc3hc1	95	44.467	Amphiprion_ocellaris
ENSFDAG00000019897	ZC3HC1	93	50.333	ENSAPEG00000004907	zc3hc1	95	44.467	Amphiprion_percula
ENSFDAG00000019897	ZC3HC1	77	52.688	ENSATEG00000016898	zc3hc1	86	46.528	Anabas_testudineus
ENSFDAG00000019897	ZC3HC1	88	61.573	ENSAPLG00000003832	ZC3HC1	99	61.573	Anas_platyrhynchos
ENSFDAG00000019897	ZC3HC1	95	62.268	ENSACAG00000001638	ZC3HC1	95	62.268	Anolis_carolinensis
ENSFDAG00000019897	ZC3HC1	100	85.847	ENSANAG00000022213	ZC3HC1	100	85.847	Aotus_nancymaae
ENSFDAG00000019897	ZC3HC1	86	45.536	ENSACLG00000025033	zc3hc1	94	44.444	Astatotilapia_calliptera
ENSFDAG00000019897	ZC3HC1	94	44.099	ENSAMXG00000036792	zc3hc1	97	43.802	Astyanax_mexicanus
ENSFDAG00000019897	ZC3HC1	100	86.471	ENSBTAG00000011247	ZC3HC1	100	85.458	Bos_taurus
ENSFDAG00000019897	ZC3HC1	100	86.255	ENSCJAG00000010536	ZC3HC1	100	86.255	Callithrix_jacchus
ENSFDAG00000019897	ZC3HC1	100	87.052	ENSCAFG00000028735	-	100	87.052	Canis_familiaris
ENSFDAG00000019897	ZC3HC1	100	87.052	ENSCAFG00000031850	-	100	87.052	Canis_familiaris
ENSFDAG00000019897	ZC3HC1	100	86.931	ENSCAFG00000001499	-	99	86.931	Canis_familiaris
ENSFDAG00000019897	ZC3HC1	100	87.052	ENSCAFG00000029401	-	99	87.052	Canis_familiaris
ENSFDAG00000019897	ZC3HC1	100	86.853	ENSCAFG00020006829	-	100	86.853	Canis_lupus_dingo
ENSFDAG00000019897	ZC3HC1	100	85.913	ENSCAFG00020023333	-	100	85.913	Canis_lupus_dingo
ENSFDAG00000019897	ZC3HC1	100	78.884	ENSCHIG00000014103	ZC3HC1	100	78.884	Capra_hircus
ENSFDAG00000019897	ZC3HC1	100	85.657	ENSTSYG00000002843	ZC3HC1	100	85.657	Carlito_syrichta
ENSFDAG00000019897	ZC3HC1	89	71.930	ENSCAPG00000016300	ZC3HC1	93	83.815	Cavia_aperea
ENSFDAG00000019897	ZC3HC1	100	88.837	ENSCPOG00000014034	ZC3HC1	100	88.837	Cavia_porcellus
ENSFDAG00000019897	ZC3HC1	100	73.684	ENSCCAG00000020384	ZC3HC1	100	85.463	Cebus_capucinus
ENSFDAG00000019897	ZC3HC1	100	88.167	ENSCATG00000023130	ZC3HC1	100	88.167	Cercocebus_atys
ENSFDAG00000019897	ZC3HC1	100	65.269	ENSCLAG00000008260	ZC3HC1	100	63.546	Chinchilla_lanigera
ENSFDAG00000019897	ZC3HC1	73	86.885	ENSCSAG00000009881	ZC3HC1	97	86.885	Chlorocebus_sabaeus
ENSFDAG00000019897	ZC3HC1	90	85.809	ENSCHOG00000011846	ZC3HC1	99	85.809	Choloepus_hoffmanni
ENSFDAG00000019897	ZC3HC1	96	67.847	ENSCPBG00000017519	ZC3HC1	97	67.835	Chrysemys_picta_bellii
ENSFDAG00000019897	ZC3HC1	100	87.935	ENSCANG00000029091	ZC3HC1	100	87.935	Colobus_angolensis_palliatus
ENSFDAG00000019897	ZC3HC1	100	83.466	ENSCGRG00001018805	Zc3hc1	100	83.466	Cricetulus_griseus_chok1gshd
ENSFDAG00000019897	ZC3HC1	100	82.271	ENSCGRG00000017114	Zc3hc1	100	82.271	Cricetulus_griseus_crigri
ENSFDAG00000019897	ZC3HC1	96	42.147	ENSCSEG00000009284	zc3hc1	94	41.352	Cynoglossus_semilaevis
ENSFDAG00000019897	ZC3HC1	94	42.041	ENSCVAG00000011566	zc3hc1	94	41.260	Cyprinodon_variegatus
ENSFDAG00000019897	ZC3HC1	95	47.166	ENSDARG00000062651	zc3hc1	95	46.356	Danio_rerio
ENSFDAG00000019897	ZC3HC1	100	83.665	ENSDNOG00000045016	ZC3HC1	100	83.665	Dasypus_novemcinctus
ENSFDAG00000019897	ZC3HC1	100	74.701	ENSDORG00000008697	Zc3hc1	100	74.701	Dipodomys_ordii
ENSFDAG00000019897	ZC3HC1	90	87.389	ENSEASG00005008789	ZC3HC1	97	87.389	Equus_asinus_asinus
ENSFDAG00000019897	ZC3HC1	100	86.282	ENSECAG00000017886	ZC3HC1	100	86.282	Equus_caballus
ENSFDAG00000019897	ZC3HC1	84	77.160	ENSEEUG00000003123	ZC3HC1	84	77.160	Erinaceus_europaeus
ENSFDAG00000019897	ZC3HC1	94	43.086	ENSELUG00000023168	zc3hc1	94	43.083	Esox_lucius
ENSFDAG00000019897	ZC3HC1	100	87.052	ENSFCAG00000010429	ZC3HC1	100	87.052	Felis_catus
ENSFDAG00000019897	ZC3HC1	90	59.615	ENSFALG00000005006	ZC3HC1	100	59.615	Ficedula_albicollis
ENSFDAG00000019897	ZC3HC1	95	45.087	ENSFHEG00000020149	zc3hc1	96	41.683	Fundulus_heteroclitus
ENSFDAG00000019897	ZC3HC1	93	45.570	ENSGMOG00000002914	zc3hc1	95	42.975	Gadus_morhua
ENSFDAG00000019897	ZC3HC1	95	64.308	ENSGALG00000008003	ZC3HC1	97	63.147	Gallus_gallus
ENSFDAG00000019897	ZC3HC1	95	43.895	ENSGAFG00000016095	zc3hc1	96	41.235	Gambusia_affinis
ENSFDAG00000019897	ZC3HC1	93	46.526	ENSGACG00000019706	zc3hc1	94	44.262	Gasterosteus_aculeatus
ENSFDAG00000019897	ZC3HC1	78	68.286	ENSGAGG00000016106	ZC3HC1	100	68.286	Gopherus_agassizii
ENSFDAG00000019897	ZC3HC1	99	87.442	ENSGGOG00000015504	ZC3HC1	99	87.442	Gorilla_gorilla
ENSFDAG00000019897	ZC3HC1	94	43.763	ENSHBUG00000008347	zc3hc1	94	42.770	Haplochromis_burtoni
ENSFDAG00000019897	ZC3HC1	100	92.326	ENSHGLG00000005085	ZC3HC1	100	92.326	Heterocephalus_glaber_female
ENSFDAG00000019897	ZC3HC1	100	92.093	ENSHGLG00100011395	ZC3HC1	100	92.093	Heterocephalus_glaber_male
ENSFDAG00000019897	ZC3HC1	95	41.529	ENSHCOG00000014309	zc3hc1	95	41.443	Hippocampus_comes
ENSFDAG00000019897	ZC3HC1	100	86.056	ENSSTOG00000023599	-	100	86.056	Ictidomys_tridecemlineatus
ENSFDAG00000019897	ZC3HC1	92	48.428	ENSKMAG00000015315	zc3hc1	88	43.265	Kryptolebias_marmoratus
ENSFDAG00000019897	ZC3HC1	94	46.459	ENSLBEG00000017325	zc3hc1	95	43.912	Labrus_bergylta
ENSFDAG00000019897	ZC3HC1	80	54.085	ENSLACG00000013032	ZC3HC1	97	53.957	Latimeria_chalumnae
ENSFDAG00000019897	ZC3HC1	99	54.046	ENSLOCG00000015963	zc3hc1	99	51.085	Lepisosteus_oculatus
ENSFDAG00000019897	ZC3HC1	100	86.919	ENSLAFG00000001292	ZC3HC1	100	86.166	Loxodonta_africana
ENSFDAG00000019897	ZC3HC1	100	88.167	ENSMFAG00000030176	ZC3HC1	100	88.824	Macaca_fascicularis
ENSFDAG00000019897	ZC3HC1	100	88.631	ENSMMUG00000006155	ZC3HC1	100	88.631	Macaca_mulatta
ENSFDAG00000019897	ZC3HC1	100	88.399	ENSMNEG00000011833	ZC3HC1	100	88.399	Macaca_nemestrina
ENSFDAG00000019897	ZC3HC1	100	88.399	ENSMLEG00000027328	ZC3HC1	100	88.399	Mandrillus_leucophaeus
ENSFDAG00000019897	ZC3HC1	96	44.689	ENSMAMG00000010691	zc3hc1	96	43.713	Mastacembelus_armatus
ENSFDAG00000019897	ZC3HC1	94	43.763	ENSMZEG00005007142	zc3hc1	94	42.770	Maylandia_zebra
ENSFDAG00000019897	ZC3HC1	95	63.415	ENSMGAG00000002977	ZC3HC1	97	62.577	Meleagris_gallopavo
ENSFDAG00000019897	ZC3HC1	82	78.072	ENSMAUG00000017032	Zc3hc1	92	78.072	Mesocricetus_auratus
ENSFDAG00000019897	ZC3HC1	100	86.775	ENSMICG00000009167	ZC3HC1	100	86.775	Microcebus_murinus
ENSFDAG00000019897	ZC3HC1	100	82.271	ENSMOCG00000015239	Zc3hc1	100	82.271	Microtus_ochrogaster
ENSFDAG00000019897	ZC3HC1	77	55.405	ENSMMOG00000002204	zc3hc1	99	41.441	Mola_mola
ENSFDAG00000019897	ZC3HC1	100	62.308	ENSMODG00000014630	ZC3HC1	100	62.308	Monodelphis_domestica
ENSFDAG00000019897	ZC3HC1	94	45.584	ENSMALG00000014447	zc3hc1	96	43.200	Monopterus_albus
ENSFDAG00000019897	ZC3HC1	100	82.470	MGP_CAROLIEiJ_G0028183	Zc3hc1	100	82.470	Mus_caroli
ENSFDAG00000019897	ZC3HC1	100	82.367	ENSMUSG00000039130	Zc3hc1	100	82.367	Mus_musculus
ENSFDAG00000019897	ZC3HC1	100	75.498	MGP_PahariEiJ_G0021941	Zc3hc1	100	75.498	Mus_pahari
ENSFDAG00000019897	ZC3HC1	100	82.599	MGP_SPRETEiJ_G0029183	Zc3hc1	100	82.599	Mus_spretus
ENSFDAG00000019897	ZC3HC1	95	85.774	ENSMPUG00000005297	ZC3HC1	95	85.774	Mustela_putorius_furo
ENSFDAG00000019897	ZC3HC1	100	84.752	ENSMLUG00000000063	-	100	84.752	Myotis_lucifugus
ENSFDAG00000019897	ZC3HC1	67	78.886	ENSMLUG00000029228	-	99	78.886	Myotis_lucifugus
ENSFDAG00000019897	ZC3HC1	100	82.704	ENSNGAG00000019014	Zc3hc1	100	82.704	Nannospalax_galili
ENSFDAG00000019897	ZC3HC1	94	43.238	ENSNBRG00000004577	zc3hc1	94	42.245	Neolamprologus_brichardi
ENSFDAG00000019897	ZC3HC1	99	86.977	ENSNLEG00000012698	ZC3HC1	99	86.977	Nomascus_leucogenys
ENSFDAG00000019897	ZC3HC1	100	75.697	ENSMEUG00000011023	ZC3HC1	100	75.697	Notamacropus_eugenii
ENSFDAG00000019897	ZC3HC1	76	79.845	ENSOPRG00000007867	-	68	79.845	Ochotona_princeps
ENSFDAG00000019897	ZC3HC1	100	88.372	ENSODEG00000014604	ZC3HC1	100	88.372	Octodon_degus
ENSFDAG00000019897	ZC3HC1	99	42.885	ENSONIG00000011644	zc3hc1	98	41.942	Oreochromis_niloticus
ENSFDAG00000019897	ZC3HC1	90	66.595	ENSOANG00000011460	ZC3HC1	100	66.595	Ornithorhynchus_anatinus
ENSFDAG00000019897	ZC3HC1	100	83.965	ENSOCUG00000017137	ZC3HC1	100	81.980	Oryctolagus_cuniculus
ENSFDAG00000019897	ZC3HC1	96	44.332	ENSORLG00000014409	zc3hc1	95	44.355	Oryzias_latipes
ENSFDAG00000019897	ZC3HC1	96	44.534	ENSORLG00020015874	zc3hc1	95	44.556	Oryzias_latipes_hni
ENSFDAG00000019897	ZC3HC1	96	44.332	ENSORLG00015014641	zc3hc1	95	43.927	Oryzias_latipes_hsok
ENSFDAG00000019897	ZC3HC1	95	47.706	ENSOMEG00000000215	zc3hc1	96	45.325	Oryzias_melastigma
ENSFDAG00000019897	ZC3HC1	95	47.164	ENSOMEG00000020604	zc3hc1	96	45.214	Oryzias_melastigma
ENSFDAG00000019897	ZC3HC1	100	80.478	ENSOGAG00000026193	ZC3HC1	100	80.478	Otolemur_garnettii
ENSFDAG00000019897	ZC3HC1	100	86.589	ENSOARG00000004907	ZC3HC1	99	85.347	Ovis_aries
ENSFDAG00000019897	ZC3HC1	99	87.674	ENSPPAG00000043172	ZC3HC1	99	87.674	Pan_paniscus
ENSFDAG00000019897	ZC3HC1	100	88.235	ENSPPRG00000001004	ZC3HC1	100	86.311	Panthera_pardus
ENSFDAG00000019897	ZC3HC1	100	86.853	ENSPTIG00000007823	ZC3HC1	100	86.853	Panthera_tigris_altaica
ENSFDAG00000019897	ZC3HC1	99	87.226	ENSPTRG00000019685	ZC3HC1	99	87.226	Pan_troglodytes
ENSFDAG00000019897	ZC3HC1	100	88.167	ENSPANG00000014229	ZC3HC1	100	88.167	Papio_anubis
ENSFDAG00000019897	ZC3HC1	95	47.412	ENSPKIG00000007172	zc3hc1	95	46.584	Paramormyrops_kingsleyae
ENSFDAG00000019897	ZC3HC1	94	66.450	ENSPSIG00000016646	ZC3HC1	98	60.000	Pelodiscus_sinensis
ENSFDAG00000019897	ZC3HC1	95	42.080	ENSPMGG00000003548	zc3hc1	96	41.844	Periophthalmus_magnuspinnatus
ENSFDAG00000019897	ZC3HC1	100	83.068	ENSPEMG00000000514	Zc3hc1	100	83.068	Peromyscus_maniculatus_bairdii
ENSFDAG00000019897	ZC3HC1	99	73.054	ENSPCIG00000020619	ZC3HC1	100	76.607	Phascolarctos_cinereus
ENSFDAG00000019897	ZC3HC1	99	42.700	ENSPFOG00000003466	zc3hc1	99	40.499	Poecilia_formosa
ENSFDAG00000019897	ZC3HC1	99	42.424	ENSPLAG00000022211	zc3hc1	99	40.734	Poecilia_latipinna
ENSFDAG00000019897	ZC3HC1	99	42.700	ENSPMEG00000001458	zc3hc1	99	40.499	Poecilia_mexicana
ENSFDAG00000019897	ZC3HC1	99	42.700	ENSPREG00000004004	zc3hc1	99	40.691	Poecilia_reticulata
ENSFDAG00000019897	ZC3HC1	99	79.722	ENSPPYG00000017998	ZC3HC1	99	79.722	Pongo_abelii
ENSFDAG00000019897	ZC3HC1	92	83.696	ENSPCAG00000001182	ZC3HC1	100	83.696	Procavia_capensis
ENSFDAG00000019897	ZC3HC1	100	87.052	ENSPCOG00000017354	ZC3HC1	100	87.052	Propithecus_coquereli
ENSFDAG00000019897	ZC3HC1	100	81.673	ENSPVAG00000003195	ZC3HC1	100	81.474	Pteropus_vampyrus
ENSFDAG00000019897	ZC3HC1	94	43.763	ENSPNYG00000020692	zc3hc1	94	42.770	Pundamilia_nyererei
ENSFDAG00000019897	ZC3HC1	93	44.561	ENSPNAG00000020746	zc3hc1	95	45.533	Pygocentrus_nattereri
ENSFDAG00000019897	ZC3HC1	100	81.511	ENSRNOG00000010154	Zc3hc1	100	81.511	Rattus_norvegicus
ENSFDAG00000019897	ZC3HC1	90	88.079	ENSRBIG00000029409	ZC3HC1	100	88.482	Rhinopithecus_bieti
ENSFDAG00000019897	ZC3HC1	100	87.935	ENSRROG00000041831	ZC3HC1	100	87.935	Rhinopithecus_roxellana
ENSFDAG00000019897	ZC3HC1	100	75.439	ENSSBOG00000032787	ZC3HC1	96	86.000	Saimiri_boliviensis_boliviensis
ENSFDAG00000019897	ZC3HC1	90	76.923	ENSSHAG00000002529	ZC3HC1	99	76.522	Sarcophilus_harrisii
ENSFDAG00000019897	ZC3HC1	94	50.160	ENSSFOG00015003667	zc3hc1	91	47.746	Scleropages_formosus
ENSFDAG00000019897	ZC3HC1	95	46.847	ENSSMAG00000000647	zc3hc1	86	44.578	Scophthalmus_maximus
ENSFDAG00000019897	ZC3HC1	93	48.171	ENSSDUG00000004241	zc3hc1	94	43.651	Seriola_dumerili
ENSFDAG00000019897	ZC3HC1	93	47.706	ENSSLDG00000025056	zc3hc1	94	43.400	Seriola_lalandi_dorsalis
ENSFDAG00000019897	ZC3HC1	99	75.050	ENSSARG00000012013	ZC3HC1	99	75.050	Sorex_araneus
ENSFDAG00000019897	ZC3HC1	85	56.944	ENSSPUG00000000778	ZC3HC1	85	56.944	Sphenodon_punctatus
ENSFDAG00000019897	ZC3HC1	94	48.503	ENSSPAG00000020041	zc3hc1	95	45.070	Stegastes_partitus
ENSFDAG00000019897	ZC3HC1	100	84.861	ENSSSCG00000016565	ZC3HC1	100	84.861	Sus_scrofa
ENSFDAG00000019897	ZC3HC1	91	48.896	ENSTRUG00000020077	zc3hc1	95	42.683	Takifugu_rubripes
ENSFDAG00000019897	ZC3HC1	95	43.558	ENSTNIG00000007585	zc3hc1	99	43.033	Tetraodon_nigroviridis
ENSFDAG00000019897	ZC3HC1	99	75.649	ENSTBEG00000005216	ZC3HC1	99	75.649	Tupaia_belangeri
ENSFDAG00000019897	ZC3HC1	96	86.458	ENSTTRG00000008458	ZC3HC1	100	86.458	Tursiops_truncatus
ENSFDAG00000019897	ZC3HC1	100	86.853	ENSUAMG00000020249	ZC3HC1	100	86.853	Ursus_americanus
ENSFDAG00000019897	ZC3HC1	100	86.454	ENSUMAG00000009268	ZC3HC1	100	86.454	Ursus_maritimus
ENSFDAG00000019897	ZC3HC1	90	85.417	ENSVPAG00000010846	ZC3HC1	77	85.417	Vicugna_pacos
ENSFDAG00000019897	ZC3HC1	96	86.667	ENSVVUG00000012386	ZC3HC1	99	86.667	Vulpes_vulpes
ENSFDAG00000019897	ZC3HC1	91	51.613	ENSXETG00000033900	zc3hc1	95	51.613	Xenopus_tropicalis
ENSFDAG00000019897	ZC3HC1	99	41.779	ENSXCOG00000013570	zc3hc1	97	44.051	Xiphophorus_couchianus
ENSFDAG00000019897	ZC3HC1	87	48.052	ENSXMAG00000010979	zc3hc1	95	44.060	Xiphophorus_maculatus