EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000019948 (Gene tree)
Gene ID: 104872762
Gene Symbol: RNPC3
Alias: FLJ20008|KIAA1839|RBM40|SNRNP65
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 22934 bases
Position: chrKN123067.1:3639716-3662649
Accession: 104872762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000012606	RRM_1	PF00076.22	1.8e-17	1	2
ENSFDAP00000012606	RRM_1	PF00076.22	1.8e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000025304	RNPC3-201	1739	XM_010639096	ENSFDAP00000012606	516 (aa)	XP_010637398	-

Gene Model

Click here to download ENSFDAG00000019948's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000019948's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000019948	RNPC3	100	91.279	ENSG00000185946	RNPC3	100	92.973	Homo_sapiens
ENSFDAG00000019948	RNPC3	95	56.048	ENSAPOG00000017371	rnpc3	97	56.048	Acanthochromis_polyacanthus
ENSFDAG00000019948	RNPC3	98	90.551	ENSAMEG00000001694	RNPC3	98	90.570	Ailuropoda_melanoleuca
ENSFDAG00000019948	RNPC3	95	53.600	ENSACIG00000021043	rnpc3	97	53.600	Amphilophus_citrinellus
ENSFDAG00000019948	RNPC3	95	55.689	ENSAOCG00000014052	rnpc3	95	55.689	Amphiprion_ocellaris
ENSFDAG00000019948	RNPC3	95	55.489	ENSAPEG00000008739	rnpc3	95	55.489	Amphiprion_percula
ENSFDAG00000019948	RNPC3	95	54.871	ENSATEG00000021263	rnpc3	97	54.871	Anabas_testudineus
ENSFDAG00000019948	RNPC3	88	70.460	ENSAPLG00000015605	RNPC3	99	70.705	Anas_platyrhynchos
ENSFDAG00000019948	RNPC3	95	68.496	ENSACAG00000002029	RNPC3	96	69.277	Anolis_carolinensis
ENSFDAG00000019948	RNPC3	100	90.504	ENSANAG00000019950	RNPC3	99	90.504	Aotus_nancymaae
ENSFDAG00000019948	RNPC3	95	54.049	ENSACLG00000014702	rnpc3	96	54.049	Astatotilapia_calliptera
ENSFDAG00000019948	RNPC3	95	57.229	ENSAMXG00000033372	rnpc3	96	57.229	Astyanax_mexicanus
ENSFDAG00000019948	RNPC3	100	91.473	ENSBTAG00000019091	RNPC3	99	91.473	Bos_taurus
ENSFDAG00000019948	RNPC3	100	85.853	ENSCJAG00000035686	RNPC3	99	86.240	Callithrix_jacchus
ENSFDAG00000019948	RNPC3	100	90.522	ENSCAFG00000019972	RNPC3	99	90.522	Canis_familiaris
ENSFDAG00000019948	RNPC3	100	90.716	ENSCAFG00020011300	RNPC3	99	90.716	Canis_lupus_dingo
ENSFDAG00000019948	RNPC3	100	91.279	ENSCHIG00000020361	RNPC3	99	91.279	Capra_hircus
ENSFDAG00000019948	RNPC3	100	89.535	ENSTSYG00000030256	RNPC3	99	89.535	Carlito_syrichta
ENSFDAG00000019948	RNPC3	84	81.922	ENSCAPG00000013600	RNPC3	97	81.903	Cavia_aperea
ENSFDAG00000019948	RNPC3	100	93.411	ENSCPOG00000031638	RNPC3	99	93.411	Cavia_porcellus
ENSFDAG00000019948	RNPC3	100	90.698	ENSCCAG00000024301	RNPC3	99	90.698	Cebus_capucinus
ENSFDAG00000019948	RNPC3	98	68.775	ENSCATG00000035930	-	98	68.182	Cercocebus_atys
ENSFDAG00000019948	RNPC3	99	90.874	ENSCATG00000002086	RNPC3	99	90.874	Cercocebus_atys
ENSFDAG00000019948	RNPC3	100	90.698	ENSCLAG00000005169	RNPC3	99	90.698	Chinchilla_lanigera
ENSFDAG00000019948	RNPC3	99	90.680	ENSCSAG00000001519	RNPC3	99	90.680	Chlorocebus_sabaeus
ENSFDAG00000019948	RNPC3	96	71.630	ENSCPBG00000028311	RNPC3	95	71.831	Chrysemys_picta_bellii
ENSFDAG00000019948	RNPC3	93	37.397	ENSCSAVG00000002800	-	74	61.667	Ciona_savignyi
ENSFDAG00000019948	RNPC3	99	90.874	ENSCANG00000031444	RNPC3	99	90.874	Colobus_angolensis_palliatus
ENSFDAG00000019948	RNPC3	100	89.341	ENSCGRG00001019276	Rnpc3	100	89.341	Cricetulus_griseus_chok1gshd
ENSFDAG00000019948	RNPC3	88	89.823	ENSCGRG00000000053	Rnpc3	100	89.823	Cricetulus_griseus_crigri
ENSFDAG00000019948	RNPC3	94	54.049	ENSCSEG00000013475	rnpc3	96	54.251	Cynoglossus_semilaevis
ENSFDAG00000019948	RNPC3	95	54.134	ENSCVAG00000002645	rnpc3	97	54.134	Cyprinodon_variegatus
ENSFDAG00000019948	RNPC3	95	56.250	ENSDARG00000011247	rnpc3	93	65.896	Danio_rerio
ENSFDAG00000019948	RNPC3	100	89.729	ENSDNOG00000047498	-	99	89.729	Dasypus_novemcinctus
ENSFDAG00000019948	RNPC3	100	90.116	ENSDNOG00000044555	-	99	90.116	Dasypus_novemcinctus
ENSFDAG00000019948	RNPC3	100	89.729	ENSDORG00000027343	Rnpc3	99	89.729	Dipodomys_ordii
ENSFDAG00000019948	RNPC3	95	47.860	ENSEBUG00000002068	rnpc3	97	48.532	Eptatretus_burgeri
ENSFDAG00000019948	RNPC3	100	90.522	ENSEASG00005015957	RNPC3	99	90.522	Equus_asinus_asinus
ENSFDAG00000019948	RNPC3	100	91.103	ENSECAG00000021148	RNPC3	99	91.103	Equus_caballus
ENSFDAG00000019948	RNPC3	95	53.372	ENSELUG00000002264	rnpc3	97	50.662	Esox_lucius
ENSFDAG00000019948	RNPC3	100	90.135	ENSFCAG00000024312	RNPC3	99	90.135	Felis_catus
ENSFDAG00000019948	RNPC3	88	71.806	ENSFALG00000002580	RNPC3	99	72.170	Ficedula_albicollis
ENSFDAG00000019948	RNPC3	96	51.098	ENSFHEG00000020647	rnpc3	98	49.709	Fundulus_heteroclitus
ENSFDAG00000019948	RNPC3	95	53.036	ENSGMOG00000019213	rnpc3	95	53.360	Gadus_morhua
ENSFDAG00000019948	RNPC3	96	72.525	ENSGALG00000005162	RNPC3	89	71.515	Gallus_gallus
ENSFDAG00000019948	RNPC3	95	53.000	ENSGAFG00000017236	rnpc3	96	52.811	Gambusia_affinis
ENSFDAG00000019948	RNPC3	95	54.898	ENSGACG00000002048	rnpc3	96	54.365	Gasterosteus_aculeatus
ENSFDAG00000019948	RNPC3	96	71.026	ENSGAGG00000008438	RNPC3	95	71.429	Gopherus_agassizii
ENSFDAG00000019948	RNPC3	99	74.125	ENSGGOG00000026201	-	99	74.125	Gorilla_gorilla
ENSFDAG00000019948	RNPC3	78	81.579	ENSHBUG00000015966	rnpc3	82	81.579	Haplochromis_burtoni
ENSFDAG00000019948	RNPC3	100	95.736	ENSHGLG00000001708	RNPC3	99	95.736	Heterocephalus_glaber_female
ENSFDAG00000019948	RNPC3	100	95.736	ENSHGLG00100003005	RNPC3	99	95.736	Heterocephalus_glaber_male
ENSFDAG00000019948	RNPC3	95	54.125	ENSHCOG00000017135	rnpc3	97	54.125	Hippocampus_comes
ENSFDAG00000019948	RNPC3	95	55.912	ENSIPUG00000002916	rnpc3	97	55.070	Ictalurus_punctatus
ENSFDAG00000019948	RNPC3	100	91.473	ENSSTOG00000025020	RNPC3	99	91.473	Ictidomys_tridecemlineatus
ENSFDAG00000019948	RNPC3	100	86.240	ENSJJAG00000010203	Rnpc3	100	87.209	Jaculus_jaculus
ENSFDAG00000019948	RNPC3	95	53.939	ENSKMAG00000017358	rnpc3	97	53.373	Kryptolebias_marmoratus
ENSFDAG00000019948	RNPC3	95	54.637	ENSLBEG00000024901	rnpc3	95	54.637	Labrus_bergylta
ENSFDAG00000019948	RNPC3	95	63.692	ENSLACG00000005720	RNPC3	90	64.300	Latimeria_chalumnae
ENSFDAG00000019948	RNPC3	95	57.637	ENSLOCG00000007986	rnpc3	96	59.878	Lepisosteus_oculatus
ENSFDAG00000019948	RNPC3	100	88.566	ENSLAFG00000032342	RNPC3	100	88.566	Loxodonta_africana
ENSFDAG00000019948	RNPC3	99	64.922	ENSMFAG00000002917	-	99	66.279	Macaca_fascicularis
ENSFDAG00000019948	RNPC3	99	90.680	ENSMFAG00000002004	RNPC3	99	90.680	Macaca_fascicularis
ENSFDAG00000019948	RNPC3	84	82.243	ENSMMUG00000002098	-	95	79.372	Macaca_mulatta
ENSFDAG00000019948	RNPC3	99	90.680	ENSMMUG00000018039	RNPC3	99	90.680	Macaca_mulatta
ENSFDAG00000019948	RNPC3	99	86.019	ENSMNEG00000033950	RNPC3	99	86.019	Macaca_nemestrina
ENSFDAG00000019948	RNPC3	98	61.417	ENSMNEG00000029209	-	98	65.286	Macaca_nemestrina
ENSFDAG00000019948	RNPC3	98	67.515	ENSMLEG00000034644	-	98	67.123	Mandrillus_leucophaeus
ENSFDAG00000019948	RNPC3	99	90.874	ENSMLEG00000033628	RNPC3	99	90.874	Mandrillus_leucophaeus
ENSFDAG00000019948	RNPC3	95	51.394	ENSMAMG00000007496	rnpc3	97	50.194	Mastacembelus_armatus
ENSFDAG00000019948	RNPC3	95	53.267	ENSMZEG00005020233	rnpc3	97	53.267	Maylandia_zebra
ENSFDAG00000019948	RNPC3	88	70.806	ENSMGAG00000006381	RNPC3	99	70.806	Meleagris_gallopavo
ENSFDAG00000019948	RNPC3	97	90.381	ENSMAUG00000001358	Rnpc3	100	89.341	Mesocricetus_auratus
ENSFDAG00000019948	RNPC3	100	92.248	ENSMICG00000029591	RNPC3	99	92.248	Microcebus_murinus
ENSFDAG00000019948	RNPC3	97	89.400	ENSMOCG00000013423	Rnpc3	100	88.417	Microtus_ochrogaster
ENSFDAG00000019948	RNPC3	95	50.898	ENSMMOG00000005309	rnpc3	97	50.098	Mola_mola
ENSFDAG00000019948	RNPC3	100	77.132	ENSMODG00000002946	RNPC3	99	77.413	Monodelphis_domestica
ENSFDAG00000019948	RNPC3	95	52.400	ENSMALG00000015471	rnpc3	97	52.400	Monopterus_albus
ENSFDAG00000019948	RNPC3	100	87.791	MGP_CAROLIEiJ_G0025555	Rnpc3	100	88.016	Mus_caroli
ENSFDAG00000019948	RNPC3	100	88.178	ENSMUSG00000027981	Rnpc3	100	88.178	Mus_musculus
ENSFDAG00000019948	RNPC3	100	87.984	MGP_PahariEiJ_G0027001	Rnpc3	100	88.212	Mus_pahari
ENSFDAG00000019948	RNPC3	100	87.597	MGP_SPRETEiJ_G0026505	Rnpc3	100	87.819	Mus_spretus
ENSFDAG00000019948	RNPC3	100	90.909	ENSMPUG00000007349	RNPC3	99	90.909	Mustela_putorius_furo
ENSFDAG00000019948	RNPC3	100	88.178	ENSMLUG00000028743	RNPC3	99	88.178	Myotis_lucifugus
ENSFDAG00000019948	RNPC3	99	89.844	ENSNGAG00000010939	Rnpc3	99	89.844	Nannospalax_galili
ENSFDAG00000019948	RNPC3	95	53.846	ENSNBRG00000012196	rnpc3	93	53.846	Neolamprologus_brichardi
ENSFDAG00000019948	RNPC3	100	91.085	ENSNLEG00000012013	RNPC3	99	91.085	Nomascus_leucogenys
ENSFDAG00000019948	RNPC3	100	90.891	ENSODEG00000007612	RNPC3	99	90.891	Octodon_degus
ENSFDAG00000019948	RNPC3	95	54.343	ENSONIG00000004770	rnpc3	99	54.343	Oreochromis_niloticus
ENSFDAG00000019948	RNPC3	90	78.326	ENSOANG00000008220	RNPC3	99	78.755	Ornithorhynchus_anatinus
ENSFDAG00000019948	RNPC3	100	90.698	ENSOCUG00000004016	RNPC3	99	90.698	Oryctolagus_cuniculus
ENSFDAG00000019948	RNPC3	95	53.521	ENSORLG00000005694	rnpc3	97	53.521	Oryzias_latipes
ENSFDAG00000019948	RNPC3	95	53.521	ENSORLG00020005513	rnpc3	97	53.722	Oryzias_latipes_hni
ENSFDAG00000019948	RNPC3	95	53.320	ENSORLG00015002179	rnpc3	97	53.521	Oryzias_latipes_hsok
ENSFDAG00000019948	RNPC3	95	53.924	ENSOMEG00000017737	rnpc3	97	55.020	Oryzias_melastigma
ENSFDAG00000019948	RNPC3	100	91.473	ENSOGAG00000026182	RNPC3	99	91.473	Otolemur_garnettii
ENSFDAG00000019948	RNPC3	100	91.085	ENSOARG00000018719	RNPC3	99	91.085	Ovis_aries
ENSFDAG00000019948	RNPC3	100	74.419	ENSPPAG00000030278	-	99	75.147	Pan_paniscus
ENSFDAG00000019948	RNPC3	100	90.909	ENSPPAG00000037459	RNPC3	99	90.909	Pan_paniscus
ENSFDAG00000019948	RNPC3	100	90.329	ENSPPRG00000020246	RNPC3	99	90.329	Panthera_pardus
ENSFDAG00000019948	RNPC3	98	90.730	ENSPTIG00000009887	RNPC3	99	90.730	Panthera_tigris_altaica
ENSFDAG00000019948	RNPC3	100	91.085	ENSPTRG00000033902	RNPC3	99	91.085	Pan_troglodytes
ENSFDAG00000019948	RNPC3	99	74.364	ENSPTRG00000044227	-	99	74.364	Pan_troglodytes
ENSFDAG00000019948	RNPC3	99	90.874	ENSPANG00000012137	RNPC3	99	90.874	Papio_anubis
ENSFDAG00000019948	RNPC3	98	71.063	ENSPANG00000029957	-	99	70.472	Papio_anubis
ENSFDAG00000019948	RNPC3	94	52.684	ENSPKIG00000008828	rnpc3	95	51.581	Paramormyrops_kingsleyae
ENSFDAG00000019948	RNPC3	63	69.880	ENSPSIG00000007396	RNPC3	99	68.373	Pelodiscus_sinensis
ENSFDAG00000019948	RNPC3	93	51.220	ENSPMGG00000011742	rnpc3	95	51.829	Periophthalmus_magnuspinnatus
ENSFDAG00000019948	RNPC3	89	89.278	ENSPEMG00000020112	Rnpc3	100	90.044	Peromyscus_maniculatus_bairdii
ENSFDAG00000019948	RNPC3	96	44.297	ENSPMAG00000003778	rnpc3	98	42.939	Petromyzon_marinus
ENSFDAG00000019948	RNPC3	100	77.132	ENSPCIG00000004415	-	99	77.132	Phascolarctos_cinereus
ENSFDAG00000019948	RNPC3	97	52.663	ENSPFOG00000009895	rnpc3	98	52.465	Poecilia_formosa
ENSFDAG00000019948	RNPC3	95	53.012	ENSPLAG00000012023	rnpc3	97	53.012	Poecilia_latipinna
ENSFDAG00000019948	RNPC3	97	52.860	ENSPMEG00000003663	rnpc3	98	52.663	Poecilia_mexicana
ENSFDAG00000019948	RNPC3	96	52.590	ENSPREG00000010206	rnpc3	97	52.705	Poecilia_reticulata
ENSFDAG00000019948	RNPC3	84	87.097	ENSPPYG00000001102	RNPC3	99	87.097	Pongo_abelii
ENSFDAG00000019948	RNPC3	95	53.846	ENSPNYG00000020603	rnpc3	96	53.846	Pundamilia_nyererei
ENSFDAG00000019948	RNPC3	95	54.563	ENSPNAG00000000524	rnpc3	75	63.084	Pygocentrus_nattereri
ENSFDAG00000019948	RNPC3	100	87.209	ENSRNOG00000017310	Rnpc3	100	87.209	Rattus_norvegicus
ENSFDAG00000019948	RNPC3	99	85.465	ENSRBIG00000043897	RNPC3	99	85.465	Rhinopithecus_bieti
ENSFDAG00000019948	RNPC3	99	91.262	ENSRROG00000032334	RNPC3	99	91.262	Rhinopithecus_roxellana
ENSFDAG00000019948	RNPC3	100	90.116	ENSSBOG00000024473	RNPC3	99	90.116	Saimiri_boliviensis_boliviensis
ENSFDAG00000019948	RNPC3	100	76.938	ENSSHAG00000011859	RNPC3	99	76.938	Sarcophilus_harrisii
ENSFDAG00000019948	RNPC3	96	58.431	ENSSFOG00015013055	rnpc3	99	56.489	Scleropages_formosus
ENSFDAG00000019948	RNPC3	95	51.292	ENSSMAG00000020346	rnpc3	97	50.386	Scophthalmus_maximus
ENSFDAG00000019948	RNPC3	95	54.563	ENSSDUG00000006600	rnpc3	96	54.563	Seriola_dumerili
ENSFDAG00000019948	RNPC3	95	54.762	ENSSLDG00000007979	rnpc3	96	54.921	Seriola_lalandi_dorsalis
ENSFDAG00000019948	RNPC3	96	65.800	ENSSPUG00000003872	-	92	66.260	Sphenodon_punctatus
ENSFDAG00000019948	RNPC3	95	71.053	ENSSPUG00000008539	-	98	69.171	Sphenodon_punctatus
ENSFDAG00000019948	RNPC3	95	54.361	ENSSPAG00000005633	rnpc3	97	54.970	Stegastes_partitus
ENSFDAG00000019948	RNPC3	100	89.729	ENSSSCG00000037254	RNPC3	99	88.178	Sus_scrofa
ENSFDAG00000019948	RNPC3	88	70.419	ENSTGUG00000004795	-	99	69.536	Taeniopygia_guttata
ENSFDAG00000019948	RNPC3	95	53.707	ENSTNIG00000018963	rnpc3	97	53.707	Tetraodon_nigroviridis
ENSFDAG00000019948	RNPC3	98	91.321	ENSUMAG00000007775	RNPC3	99	91.321	Ursus_maritimus
ENSFDAG00000019948	RNPC3	100	90.716	ENSVVUG00000000331	RNPC3	99	90.716	Vulpes_vulpes
ENSFDAG00000019948	RNPC3	97	50.781	ENSXETG00000025027	rnpc3	99	50.781	Xenopus_tropicalis
ENSFDAG00000019948	RNPC3	95	53.082	ENSXCOG00000005013	rnpc3	97	51.064	Xiphophorus_couchianus
ENSFDAG00000019948	RNPC3	95	53.400	ENSXMAG00000006495	rnpc3	97	53.000	Xiphophorus_maculatus