EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000020009 (Gene tree)
Gene ID: -
Gene Symbol: SAFB2
Alias: KIAA0138
Full Name: scaffold attachment factor B2
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 24251 bases
Position: chrKN122676.1:2899037-2923287
Accession: 104869731
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000012679	RRM_5	PF13893.6	1.9e-06	1	1
ENSFDAP00000012679	RRM_1	PF00076.22	5.5e-14	1	1
ENSFDAP00000012679	SAP	PF02037.27	2.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000025393	SAFB2-201	2343	XM_010635078	ENSFDAP00000012679	780 (aa)	XP_010633380	-

Gene Model

Click here to download ENSFDAG00000020009's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000020009's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000020009	SAFB2	93	63.446	ENSFDAG00000020306	SAFB	100	60.264

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000020009	SAFB2	93	83.065	ENSG00000130254	SAFB2	93	82.780	Homo_sapiens
ENSFDAG00000020009	SAFB2	91	80.968	ENSAMEG00000012146	SAFB2	91	80.727	Ailuropoda_melanoleuca
ENSFDAG00000020009	SAFB2	93	84.853	ENSANAG00000031936	SAFB2	93	84.530	Aotus_nancymaae
ENSFDAG00000020009	SAFB2	98	79.516	ENSBTAG00000001790	SAFB2	92	79.305	Bos_taurus
ENSFDAG00000020009	SAFB2	91	82.097	ENSCAFG00000018814	SAFB2	93	81.833	Canis_familiaris
ENSFDAG00000020009	SAFB2	91	81.804	ENSCAFG00020018939	SAFB2	93	81.546	Canis_lupus_dingo
ENSFDAG00000020009	SAFB2	97	79.645	ENSCHIG00000024547	SAFB2	92	79.430	Capra_hircus
ENSFDAG00000020009	SAFB2	86	66.225	ENSCAPG00000011771	SAFB2	100	62.293	Cavia_aperea
ENSFDAG00000020009	SAFB2	95	77.778	ENSCPOG00000011394	SAFB2	93	77.607	Cavia_porcellus
ENSFDAG00000020009	SAFB2	93	83.713	ENSCCAG00000017348	SAFB2	93	83.413	Cebus_capucinus
ENSFDAG00000020009	SAFB2	93	84.202	ENSCATG00000039497	SAFB2	93	83.892	Cercocebus_atys
ENSFDAG00000020009	SAFB2	93	83.065	ENSCSAG00000009959	SAFB2	93	82.780	Chlorocebus_sabaeus
ENSFDAG00000020009	SAFB2	73	69.608	ENSCHOG00000010684	SAFB2	88	69.598	Choloepus_hoffmanni
ENSFDAG00000020009	SAFB2	93	84.202	ENSCANG00000024675	SAFB2	93	83.892	Colobus_angolensis_palliatus
ENSFDAG00000020009	SAFB2	100	68.230	ENSCGRG00001015833	Safb2	93	68.249	Cricetulus_griseus_chok1gshd
ENSFDAG00000020009	SAFB2	100	68.230	ENSCGRG00000011131	Safb2	93	68.249	Cricetulus_griseus_crigri
ENSFDAG00000020009	SAFB2	55	74.830	ENSDNOG00000045791	-	99	74.376	Dasypus_novemcinctus
ENSFDAG00000020009	SAFB2	95	75.041	ENSDORG00000016199	Safb2	89	75.399	Dipodomys_ordii
ENSFDAG00000020009	SAFB2	51	80.269	ENSETEG00000016756	-	52	85.593	Echinops_telfairi
ENSFDAG00000020009	SAFB2	79	79.371	ENSEASG00005022952	SAFB2	83	79.310	Equus_asinus_asinus
ENSFDAG00000020009	SAFB2	99	77.581	ENSECAG00000018978	SAFB2	93	77.567	Equus_caballus
ENSFDAG00000020009	SAFB2	91	82.258	ENSFCAG00000011834	SAFB2	93	81.991	Felis_catus
ENSFDAG00000020009	SAFB2	92	81.051	ENSGGOG00000015093	SAFB2	91	80.922	Gorilla_gorilla
ENSFDAG00000020009	SAFB2	100	88.189	ENSHGLG00000017442	SAFB2	93	87.963	Heterocephalus_glaber_female
ENSFDAG00000020009	SAFB2	92	77.920	ENSLAFG00000003836	SAFB2	80	76.646	Loxodonta_africana
ENSFDAG00000020009	SAFB2	93	83.876	ENSMFAG00000039706	SAFB2	93	83.573	Macaca_fascicularis
ENSFDAG00000020009	SAFB2	93	84.365	ENSMMUG00000017968	SAFB2	93	84.051	Macaca_mulatta
ENSFDAG00000020009	SAFB2	100	73.226	ENSMNEG00000032042	SAFB2	93	73.947	Macaca_nemestrina
ENSFDAG00000020009	SAFB2	93	84.202	ENSMLEG00000034562	SAFB2	93	83.892	Mandrillus_leucophaeus
ENSFDAG00000020009	SAFB2	81	83.122	ENSMAUG00000011573	Safb2	86	82.800	Mesocricetus_auratus
ENSFDAG00000020009	SAFB2	100	82.068	ENSMICG00000008711	SAFB2	93	81.804	Microcebus_murinus
ENSFDAG00000020009	SAFB2	100	70.262	ENSMOCG00000006827	Safb2	93	70.091	Microtus_ochrogaster
ENSFDAG00000020009	SAFB2	97	65.455	ENSMODG00000001178	SAFB2	93	65.000	Monodelphis_domestica
ENSFDAG00000020009	SAFB2	100	66.667	MGP_CAROLIEiJ_G0021779	Safb2	93	66.716	Mus_caroli
ENSFDAG00000020009	SAFB2	100	67.066	ENSMUSG00000042625	Safb2	93	67.254	Mus_musculus
ENSFDAG00000020009	SAFB2	100	66.063	MGP_PahariEiJ_G0020768	Safb2	93	66.272	Mus_pahari
ENSFDAG00000020009	SAFB2	100	57.837	MGP_SPRETEiJ_G0022690	Safb2	100	55.676	Mus_spretus
ENSFDAG00000020009	SAFB2	91	81.643	ENSMPUG00000006106	SAFB2	86	81.388	Mustela_putorius_furo
ENSFDAG00000020009	SAFB2	93	80.806	ENSMLUG00000001050	SAFB2	88	80.569	Myotis_lucifugus
ENSFDAG00000020009	SAFB2	93	84.006	ENSNLEG00000013514	SAFB2	93	83.703	Nomascus_leucogenys
ENSFDAG00000020009	SAFB2	91	61.726	ENSMEUG00000002456	SAFB2	92	59.825	Notamacropus_eugenii
ENSFDAG00000020009	SAFB2	100	68.910	ENSOPRG00000011523	-	93	68.603	Ochotona_princeps
ENSFDAG00000020009	SAFB2	100	84.878	ENSODEG00000014751	SAFB2	93	84.713	Octodon_degus
ENSFDAG00000020009	SAFB2	55	51.826	ENSOANG00000011319	-	97	51.370	Ornithorhynchus_anatinus
ENSFDAG00000020009	SAFB2	53	78.365	ENSOCUG00000001592	-	93	78.780	Oryctolagus_cuniculus
ENSFDAG00000020009	SAFB2	93	81.481	ENSOGAG00000006855	SAFB2	93	80.189	Otolemur_garnettii
ENSFDAG00000020009	SAFB2	78	78.422	ENSOARG00000007982	SAFB2	68	78.233	Ovis_aries
ENSFDAG00000020009	SAFB2	93	83.845	ENSPPAG00000043392	SAFB2	93	83.544	Pan_paniscus
ENSFDAG00000020009	SAFB2	91	82.581	ENSPPRG00000011310	SAFB2	93	82.306	Panthera_pardus
ENSFDAG00000020009	SAFB2	70	81.227	ENSPTIG00000015120	SAFB2	67	80.952	Panthera_tigris_altaica
ENSFDAG00000020009	SAFB2	93	74.759	ENSPTRG00000010334	SAFB2	93	75.238	Pan_troglodytes
ENSFDAG00000020009	SAFB2	93	84.039	ENSPANG00000007004	SAFB2	93	83.732	Papio_anubis
ENSFDAG00000020009	SAFB2	100	67.119	ENSPEMG00000016015	Safb2	93	67.012	Peromyscus_maniculatus_bairdii
ENSFDAG00000020009	SAFB2	55	79.377	ENSPCIG00000009518	-	88	78.889	Phascolarctos_cinereus
ENSFDAG00000020009	SAFB2	93	83.548	ENSPPYG00000009427	SAFB2	93	83.254	Pongo_abelii
ENSFDAG00000020009	SAFB2	93	78.205	ENSPCAG00000006352	SAFB2	84	78.650	Procavia_capensis
ENSFDAG00000020009	SAFB2	100	77.868	ENSPCOG00000023260	SAFB2	93	76.582	Propithecus_coquereli
ENSFDAG00000020009	SAFB2	69	79.545	ENSPVAG00000004902	-	73	79.545	Pteropus_vampyrus
ENSFDAG00000020009	SAFB2	83	66.510	ENSRNOG00000049511	AABR07066522.1	90	66.872	Rattus_norvegicus
ENSFDAG00000020009	SAFB2	71	94.068	ENSRBIG00000033446	SAFB2	90	93.173	Rhinopithecus_bieti
ENSFDAG00000020009	SAFB2	93	84.365	ENSRROG00000006606	SAFB2	93	84.051	Rhinopithecus_roxellana
ENSFDAG00000020009	SAFB2	93	83.388	ENSSBOG00000032315	SAFB2	93	83.094	Saimiri_boliviensis_boliviensis
ENSFDAG00000020009	SAFB2	96	66.044	ENSSHAG00000012703	SAFB2	92	64.895	Sarcophilus_harrisii
ENSFDAG00000020009	SAFB2	64	79.036	ENSSARG00000000649	SAFB2	87	75.221	Sorex_araneus
ENSFDAG00000020009	SAFB2	95	81.320	ENSSSCG00000013523	SAFB2	93	81.073	Sus_scrofa
ENSFDAG00000020009	SAFB2	70	74.460	ENSTBEG00000012709	SAFB2	66	74.330	Tupaia_belangeri
ENSFDAG00000020009	SAFB2	70	79.391	ENSTTRG00000013585	SAFB2	60	79.159	Tursiops_truncatus
ENSFDAG00000020009	SAFB2	91	83.117	ENSUAMG00000024695	SAFB2	91	82.830	Ursus_americanus
ENSFDAG00000020009	SAFB2	76	79.967	ENSUMAG00000009585	SAFB2	97	70.301	Ursus_maritimus
ENSFDAG00000020009	SAFB2	78	70.428	ENSVPAG00000012041	SAFB2	83	70.233	Vicugna_pacos
ENSFDAG00000020009	SAFB2	91	81.965	ENSVVUG00000013695	SAFB2	86	90.024	Vulpes_vulpes