EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000020016 (Gene tree)
Gene ID: 104863469
Gene Symbol: -
Alias: -
Full Name: poly(A) binding protein cytoplasmic 4
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 20686 bases
Position: chrKN122157.1:3321572-3342257
Accession: 104863469
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000012693	PABP	PF00658.18	1.6e-31	1	1
ENSFDAP00000012693	RRM_5	PF13893.6	2.9e-09	1	2
ENSFDAP00000012693	RRM_5	PF13893.6	2.9e-09	2	2
ENSFDAP00000012693	RRM_1	PF00076.22	3.3e-92	1	4
ENSFDAP00000012693	RRM_1	PF00076.22	3.3e-92	2	4
ENSFDAP00000012693	RRM_1	PF00076.22	3.3e-92	3	4
ENSFDAP00000012693	RRM_1	PF00076.22	3.3e-92	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000025409	-	5616	XM_010625880	ENSFDAP00000012693	660 (aa)	XP_010624182	UPI0005400FD9

Gene Model

Click here to download ENSFDAG00000020016's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000020016's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000020016	-	56	34.940	ENSFDAG00000018820	ELAVL2	86	34.940
ENSFDAG00000020016	-	58	71.081	ENSFDAG00000019606	PABPC4L	99	71.081
ENSFDAG00000020016	-	99	67.825	ENSFDAG00000018480	PABPC3	100	67.372
ENSFDAG00000020016	-	58	30.625	ENSFDAG00000014507	ELAVL4	91	30.625
ENSFDAG00000020016	-	98	61.705	ENSFDAG00000008291	PABPC1L	98	62.133
ENSFDAG00000020016	-	55	30.370	ENSFDAG00000014427	-	85	30.189
ENSFDAG00000020016	-	55	36.250	ENSFDAG00000007943	-	60	36.709
ENSFDAG00000020016	-	52	31.646	ENSFDAG00000019780	HNRNPA0	64	32.667
ENSFDAG00000020016	-	55	31.250	ENSFDAG00000003933	TIAL1	78	30.682
ENSFDAG00000020016	-	98	74.210	ENSFDAG00000005583	PABPC1	99	73.378
ENSFDAG00000020016	-	56	66.854	ENSFDAG00000000126	PABPC5	95	66.667
ENSFDAG00000020016	-	90	68.107	ENSFDAG00000010581	-	100	63.866
ENSFDAG00000020016	-	56	76.650	ENSFDAG00000005484	-	99	76.650
ENSFDAG00000020016	-	55	37.500	ENSFDAG00000015074	CELF2	59	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000020016	-	100	99.394	ENSG00000090621	PABPC4	100	100.000	Homo_sapiens
ENSFDAG00000020016	-	99	79.848	ENSAPOG00000001161	pabpc4	100	79.821	Acanthochromis_polyacanthus
ENSFDAG00000020016	-	98	54.839	ENSAMEG00000015083	-	99	54.531	Ailuropoda_melanoleuca
ENSFDAG00000020016	-	100	98.939	ENSAMEG00000011535	-	100	98.939	Ailuropoda_melanoleuca
ENSFDAG00000020016	-	100	80.269	ENSACIG00000023343	pabpc4	100	80.120	Amphilophus_citrinellus
ENSFDAG00000020016	-	99	80.000	ENSAOCG00000021529	pabpc4	91	90.807	Amphiprion_ocellaris
ENSFDAG00000020016	-	99	80.000	ENSAPEG00000019196	pabpc4	100	79.970	Amphiprion_percula
ENSFDAG00000020016	-	99	78.820	ENSATEG00000007402	pabpc4	100	79.254	Anabas_testudineus
ENSFDAG00000020016	-	99	87.102	ENSAPLG00000009729	-	100	86.039	Anas_platyrhynchos
ENSFDAG00000020016	-	99	85.714	ENSACAG00000002544	PABPC4	100	85.714	Anolis_carolinensis
ENSFDAG00000020016	-	100	99.242	ENSANAG00000025079	PABPC4	100	99.242	Aotus_nancymaae
ENSFDAG00000020016	-	100	79.372	ENSACLG00000019558	pabpc4	100	79.970	Astatotilapia_calliptera
ENSFDAG00000020016	-	99	75.606	ENSAMXG00000018779	pabpc4	99	75.758	Astyanax_mexicanus
ENSFDAG00000020016	-	55	86.826	ENSBTAG00000048536	-	98	86.826	Bos_taurus
ENSFDAG00000020016	-	100	96.520	ENSBTAG00000017125	PABPC4	100	96.520	Bos_taurus
ENSFDAG00000020016	-	100	99.091	ENSCJAG00000002512	-	100	99.091	Callithrix_jacchus
ENSFDAG00000020016	-	78	83.150	ENSCJAG00000045953	-	92	83.088	Callithrix_jacchus
ENSFDAG00000020016	-	99	98.993	ENSCAFG00000003081	PABPC4	100	94.848	Canis_familiaris
ENSFDAG00000020016	-	100	99.091	ENSCAFG00020004161	PABPC4	100	99.091	Canis_lupus_dingo
ENSFDAG00000020016	-	100	76.515	ENSCHIG00000023385	-	100	76.515	Capra_hircus
ENSFDAG00000020016	-	100	98.939	ENSCHIG00000019398	-	100	98.939	Capra_hircus
ENSFDAG00000020016	-	100	99.394	ENSTSYG00000006532	PABPC4	100	99.394	Carlito_syrichta
ENSFDAG00000020016	-	99	99.392	ENSCAPG00000015984	PABPC4	100	99.392	Cavia_aperea
ENSFDAG00000020016	-	100	99.394	ENSCPOG00000009552	PABPC4	100	99.394	Cavia_porcellus
ENSFDAG00000020016	-	100	99.242	ENSCCAG00000037306	PABPC4	100	99.242	Cebus_capucinus
ENSFDAG00000020016	-	100	99.545	ENSCATG00000042164	PABPC4	100	99.545	Cercocebus_atys
ENSFDAG00000020016	-	100	99.394	ENSCLAG00000011899	PABPC4	100	99.394	Chinchilla_lanigera
ENSFDAG00000020016	-	100	99.545	ENSCSAG00000001135	PABPC4	100	99.545	Chlorocebus_sabaeus
ENSFDAG00000020016	-	82	97.889	ENSCHOG00000005327	PABPC4	81	97.889	Choloepus_hoffmanni
ENSFDAG00000020016	-	99	87.405	ENSCPBG00000001038	PABPC4	100	86.495	Chrysemys_picta_bellii
ENSFDAG00000020016	-	99	99.386	ENSCANG00000034177	PABPC4	100	99.386	Colobus_angolensis_palliatus
ENSFDAG00000020016	-	100	97.590	ENSCGRG00001018166	Pabpc4	100	97.590	Cricetulus_griseus_chok1gshd
ENSFDAG00000020016	-	99	95.115	ENSCGRG00000009777	Pabpc4	100	95.115	Cricetulus_griseus_crigri
ENSFDAG00000020016	-	100	79.073	ENSCSEG00000000130	pabpc4	100	79.372	Cynoglossus_semilaevis
ENSFDAG00000020016	-	99	79.787	ENSCVAG00000019246	pabpc4	100	80.547	Cyprinodon_variegatus
ENSFDAG00000020016	-	99	81.335	ENSDARG00000059259	pabpc4	100	81.476	Danio_rerio
ENSFDAG00000020016	-	98	99.483	ENSDNOG00000018444	-	99	99.483	Dasypus_novemcinctus
ENSFDAG00000020016	-	100	97.121	ENSDORG00000011581	Pabpc4	100	97.121	Dipodomys_ordii
ENSFDAG00000020016	-	86	62.214	ENSETEG00000009172	-	99	62.261	Echinops_telfairi
ENSFDAG00000020016	-	100	100.000	ENSETEG00000018453	-	84	100.000	Echinops_telfairi
ENSFDAG00000020016	-	99	73.525	ENSEBUG00000000992	pabpc4	99	80.346	Eptatretus_burgeri
ENSFDAG00000020016	-	97	73.302	ENSEBUG00000013782	pabpc4	99	72.466	Eptatretus_burgeri
ENSFDAG00000020016	-	100	99.545	ENSEASG00005014119	PABPC4	100	99.545	Equus_asinus_asinus
ENSFDAG00000020016	-	100	99.545	ENSECAG00000009396	PABPC4	100	99.545	Equus_caballus
ENSFDAG00000020016	-	100	96.212	ENSEEUG00000002962	PABPC4	100	96.212	Erinaceus_europaeus
ENSFDAG00000020016	-	99	80.213	ENSELUG00000003195	pabpc4	98	80.694	Esox_lucius
ENSFDAG00000020016	-	100	99.242	ENSFCAG00000015254	-	100	99.242	Felis_catus
ENSFDAG00000020016	-	99	86.646	ENSFALG00000000543	PABPC4	100	85.455	Ficedula_albicollis
ENSFDAG00000020016	-	100	79.641	ENSFHEG00000007548	pabpc4	96	88.578	Fundulus_heteroclitus
ENSFDAG00000020016	-	99	79.487	ENSGMOG00000019025	pabpc4	99	79.940	Gadus_morhua
ENSFDAG00000020016	-	99	87.405	ENSGALG00000003800	PABPC4	100	86.191	Gallus_gallus
ENSFDAG00000020016	-	100	79.730	ENSGAFG00000018195	pabpc4	98	95.556	Gambusia_affinis
ENSFDAG00000020016	-	100	78.358	ENSGACG00000007179	pabpc4	100	78.869	Gasterosteus_aculeatus
ENSFDAG00000020016	-	99	87.709	ENSGAGG00000001888	PABPC4	100	86.646	Gopherus_agassizii
ENSFDAG00000020016	-	100	99.394	ENSGGOG00000004002	PABPC4	100	99.394	Gorilla_gorilla
ENSFDAG00000020016	-	100	79.522	ENSHBUG00000020206	pabpc4	100	80.120	Haplochromis_burtoni
ENSFDAG00000020016	-	100	99.848	ENSHGLG00000011162	PABPC4	100	99.848	Heterocephalus_glaber_female
ENSFDAG00000020016	-	100	97.424	ENSHGLG00100001580	PABPC4	100	97.424	Heterocephalus_glaber_male
ENSFDAG00000020016	-	100	78.892	ENSHCOG00000012694	pabpc4	100	79.491	Hippocampus_comes
ENSFDAG00000020016	-	98	79.755	ENSIPUG00000016620	pabpc4	99	79.699	Ictalurus_punctatus
ENSFDAG00000020016	-	100	97.273	ENSSTOG00000010416	PABPC4	100	97.273	Ictidomys_tridecemlineatus
ENSFDAG00000020016	-	100	94.848	ENSJJAG00000007781	Pabpc4	100	94.848	Jaculus_jaculus
ENSFDAG00000020016	-	99	91.076	ENSKMAG00000013597	pabpc4	99	79.819	Kryptolebias_marmoratus
ENSFDAG00000020016	-	100	79.167	ENSLBEG00000013654	pabpc4	100	79.495	Labrus_bergylta
ENSFDAG00000020016	-	99	84.012	ENSLACG00000011907	PABPC4	100	83.107	Latimeria_chalumnae
ENSFDAG00000020016	-	99	81.928	ENSLOCG00000001877	pabpc4	99	82.078	Lepisosteus_oculatus
ENSFDAG00000020016	-	100	99.091	ENSLAFG00000000151	PABPC4	100	99.091	Loxodonta_africana
ENSFDAG00000020016	-	100	99.545	ENSMFAG00000041481	PABPC4	100	99.545	Macaca_fascicularis
ENSFDAG00000020016	-	100	99.545	ENSMMUG00000007497	PABPC4	100	99.545	Macaca_mulatta
ENSFDAG00000020016	-	100	99.394	ENSMNEG00000043054	PABPC4	100	99.394	Macaca_nemestrina
ENSFDAG00000020016	-	100	99.545	ENSMLEG00000040716	PABPC4	100	99.545	Mandrillus_leucophaeus
ENSFDAG00000020016	-	99	79.545	ENSMAMG00000010025	pabpc4	99	79.549	Mastacembelus_armatus
ENSFDAG00000020016	-	100	79.223	ENSMZEG00005006141	pabpc4	100	79.821	Maylandia_zebra
ENSFDAG00000020016	-	99	86.745	ENSMGAG00000005408	PABPC4	100	86.577	Meleagris_gallopavo
ENSFDAG00000020016	-	69	89.423	ENSMAUG00000001295	-	97	89.423	Mesocricetus_auratus
ENSFDAG00000020016	-	74	95.413	ENSMAUG00000019763	-	84	95.413	Mesocricetus_auratus
ENSFDAG00000020016	-	55	81.287	ENSMAUG00000004089	-	92	81.287	Mesocricetus_auratus
ENSFDAG00000020016	-	99	73.649	ENSMICG00000036729	-	100	73.311	Microcebus_murinus
ENSFDAG00000020016	-	89	95.262	ENSMICG00000016633	-	97	99.574	Microcebus_murinus
ENSFDAG00000020016	-	100	97.892	ENSMOCG00000006763	Pabpc4	100	97.892	Microtus_ochrogaster
ENSFDAG00000020016	-	100	74.074	ENSMMOG00000002363	pabpc4	99	74.519	Mola_mola
ENSFDAG00000020016	-	98	89.352	ENSMODG00000017657	-	100	88.939	Monodelphis_domestica
ENSFDAG00000020016	-	56	74.011	ENSMODG00000018051	-	91	74.011	Monodelphis_domestica
ENSFDAG00000020016	-	99	79.003	ENSMALG00000011017	pabpc4	100	79.049	Monopterus_albus
ENSFDAG00000020016	-	99	83.898	MGP_CAROLIEiJ_G0024864	-	100	83.898	Mus_caroli
ENSFDAG00000020016	-	100	97.576	MGP_CAROLIEiJ_G0026435	-	100	99.291	Mus_caroli
ENSFDAG00000020016	-	100	98.030	ENSMUSG00000011257	Pabpc4	100	99.405	Mus_musculus
ENSFDAG00000020016	-	99	97.696	MGP_PahariEiJ_G0028765	Pabpc4	100	100.000	Mus_pahari
ENSFDAG00000020016	-	99	78.752	MGP_SPRETEiJ_G0027415	Pabpc4	100	99.291	Mus_spretus
ENSFDAG00000020016	-	95	51.185	ENSMPUG00000006836	-	100	49.842	Mustela_putorius_furo
ENSFDAG00000020016	-	100	99.242	ENSMPUG00000014414	-	100	99.242	Mustela_putorius_furo
ENSFDAG00000020016	-	100	92.273	ENSMLUG00000012068	PABPC4	100	92.273	Myotis_lucifugus
ENSFDAG00000020016	-	100	96.515	ENSNGAG00000018292	Pabpc4	100	96.515	Nannospalax_galili
ENSFDAG00000020016	-	64	86.441	ENSNBRG00000010047	-	75	86.441	Neolamprologus_brichardi
ENSFDAG00000020016	-	57	92.788	ENSNBRG00000009708	pabpc4	98	92.788	Neolamprologus_brichardi
ENSFDAG00000020016	-	100	97.121	ENSNLEG00000011928	PABPC4	100	97.121	Nomascus_leucogenys
ENSFDAG00000020016	-	82	98.947	ENSOPRG00000011984	PABPC4	87	98.947	Ochotona_princeps
ENSFDAG00000020016	-	50	85.714	ENSODEG00000013457	-	100	85.714	Octodon_degus
ENSFDAG00000020016	-	100	98.788	ENSODEG00000006592	-	100	98.788	Octodon_degus
ENSFDAG00000020016	-	99	89.938	ENSODEG00000017434	-	100	89.613	Octodon_degus
ENSFDAG00000020016	-	100	79.522	ENSONIG00000008176	pabpc4	100	80.120	Oreochromis_niloticus
ENSFDAG00000020016	-	99	87.102	ENSOANG00000010001	PABPC4	100	87.102	Ornithorhynchus_anatinus
ENSFDAG00000020016	-	96	99.209	ENSOCUG00000000562	PABPC4	88	99.209	Oryctolagus_cuniculus
ENSFDAG00000020016	-	99	91.049	ENSORLG00000017479	pabpc4	99	91.049	Oryzias_latipes
ENSFDAG00000020016	-	99	91.049	ENSORLG00020018644	pabpc4	99	91.049	Oryzias_latipes_hni
ENSFDAG00000020016	-	99	91.049	ENSORLG00015015042	pabpc4	99	91.049	Oryzias_latipes_hsok
ENSFDAG00000020016	-	99	80.000	ENSOMEG00000014410	pabpc4	99	83.468	Oryzias_melastigma
ENSFDAG00000020016	-	100	96.983	ENSOGAG00000004067	PABPC4	100	96.983	Otolemur_garnettii
ENSFDAG00000020016	-	100	98.939	ENSOARG00000020060	PABPC4	100	98.939	Ovis_aries
ENSFDAG00000020016	-	100	99.394	ENSPPAG00000043625	PABPC4	100	99.394	Pan_paniscus
ENSFDAG00000020016	-	100	99.242	ENSPPRG00000024727	PABPC4	100	99.242	Panthera_pardus
ENSFDAG00000020016	-	100	99.242	ENSPTIG00000005829	PABPC4	100	99.242	Panthera_tigris_altaica
ENSFDAG00000020016	-	100	99.394	ENSPTRG00000000573	PABPC4	100	99.394	Pan_troglodytes
ENSFDAG00000020016	-	100	99.394	ENSPANG00000009484	PABPC4	100	99.394	Papio_anubis
ENSFDAG00000020016	-	99	81.241	ENSPKIG00000025356	pabpc4	99	81.392	Paramormyrops_kingsleyae
ENSFDAG00000020016	-	99	87.557	ENSPSIG00000016892	PABPC4	100	86.646	Pelodiscus_sinensis
ENSFDAG00000020016	-	100	78.313	ENSPMGG00000009073	pabpc4	99	76.772	Periophthalmus_magnuspinnatus
ENSFDAG00000020016	-	100	97.424	ENSPEMG00000023569	-	99	97.424	Peromyscus_maniculatus_bairdii
ENSFDAG00000020016	-	100	91.212	ENSPEMG00000024193	-	99	91.212	Peromyscus_maniculatus_bairdii
ENSFDAG00000020016	-	89	69.967	ENSPMAG00000002836	pabpc4	100	70.297	Petromyzon_marinus
ENSFDAG00000020016	-	97	67.505	ENSPMAG00000007885	pabpc4	100	67.041	Petromyzon_marinus
ENSFDAG00000020016	-	98	88.717	ENSPCIG00000020674	PABPC4	100	93.810	Phascolarctos_cinereus
ENSFDAG00000020016	-	100	79.042	ENSPFOG00000002682	pabpc4	100	80.090	Poecilia_formosa
ENSFDAG00000020016	-	100	78.892	ENSPLAG00000010112	pabpc4	100	80.090	Poecilia_latipinna
ENSFDAG00000020016	-	99	79.483	ENSPMEG00000019739	pabpc4	100	80.240	Poecilia_mexicana
ENSFDAG00000020016	-	100	83.447	ENSPREG00000001589	pabpc4	100	83.447	Poecilia_reticulata
ENSFDAG00000020016	-	100	99.394	ENSPPYG00000001506	PABPC4	100	99.394	Pongo_abelii
ENSFDAG00000020016	-	100	94.242	ENSPCAG00000003341	PABPC4	100	94.242	Procavia_capensis
ENSFDAG00000020016	-	99	82.003	ENSPCOG00000025882	-	95	94.059	Propithecus_coquereli
ENSFDAG00000020016	-	100	99.546	ENSPCOG00000023725	-	100	99.546	Propithecus_coquereli
ENSFDAG00000020016	-	99	98.992	ENSPVAG00000002187	PABPC4	100	98.992	Pteropus_vampyrus
ENSFDAG00000020016	-	100	79.372	ENSPNYG00000006134	pabpc4	100	79.970	Pundamilia_nyererei
ENSFDAG00000020016	-	100	79.940	ENSPNAG00000024355	pabpc4	100	80.240	Pygocentrus_nattereri
ENSFDAG00000020016	-	100	93.636	ENSRNOG00000028592	AABR07035074.1	100	93.636	Rattus_norvegicus
ENSFDAG00000020016	-	100	95.758	ENSRNOG00000015642	Pabpc4	100	95.758	Rattus_norvegicus
ENSFDAG00000020016	-	100	99.545	ENSRBIG00000039761	PABPC4	100	99.545	Rhinopithecus_bieti
ENSFDAG00000020016	-	100	99.545	ENSRROG00000033355	PABPC4	100	99.545	Rhinopithecus_roxellana
ENSFDAG00000020016	-	100	99.091	ENSSBOG00000026193	PABPC4	100	99.091	Saimiri_boliviensis_boliviensis
ENSFDAG00000020016	-	98	88.563	ENSSHAG00000018139	PABPC4	100	88.164	Sarcophilus_harrisii
ENSFDAG00000020016	-	99	82.132	ENSSFOG00015023514	pabpc4	99	82.031	Scleropages_formosus
ENSFDAG00000020016	-	99	79.123	ENSSMAG00000009007	pabpc4	99	79.425	Scophthalmus_maximus
ENSFDAG00000020016	-	99	79.242	ENSSDUG00000012683	pabpc4	95	88.046	Seriola_dumerili
ENSFDAG00000020016	-	99	79.242	ENSSLDG00000013025	pabpc4	97	85.588	Seriola_lalandi_dorsalis
ENSFDAG00000020016	-	100	91.818	ENSSARG00000000310	PABPC4	100	91.818	Sorex_araneus
ENSFDAG00000020016	-	99	87.102	ENSSPUG00000003204	PABPC4	100	86.039	Sphenodon_punctatus
ENSFDAG00000020016	-	99	90.562	ENSSPAG00000009252	pabpc4	99	79.398	Stegastes_partitus
ENSFDAG00000020016	-	89	50.337	ENSSSCG00000036170	-	96	50.337	Sus_scrofa
ENSFDAG00000020016	-	100	99.394	ENSSSCG00000003660	-	100	99.394	Sus_scrofa
ENSFDAG00000020016	-	99	87.292	ENSTGUG00000001266	PABPC4	100	87.292	Taeniopygia_guttata
ENSFDAG00000020016	-	100	79.010	ENSTRUG00000005907	pabpc4	99	79.429	Takifugu_rubripes
ENSFDAG00000020016	-	100	75.566	ENSTNIG00000016902	pabpc4	99	75.264	Tetraodon_nigroviridis
ENSFDAG00000020016	-	99	88.403	ENSTBEG00000009035	PABPC4	100	88.403	Tupaia_belangeri
ENSFDAG00000020016	-	99	83.525	ENSTTRG00000014340	PABPC4	100	87.227	Tursiops_truncatus
ENSFDAG00000020016	-	100	98.939	ENSUAMG00000000303	PABPC4	100	98.939	Ursus_americanus
ENSFDAG00000020016	-	100	98.939	ENSUMAG00000019585	PABPC4	100	99.057	Ursus_maritimus
ENSFDAG00000020016	-	84	96.454	ENSVPAG00000010041	PABPC4	77	96.454	Vicugna_pacos
ENSFDAG00000020016	-	100	99.091	ENSVVUG00000005215	PABPC4	100	99.091	Vulpes_vulpes
ENSFDAG00000020016	-	58	97.024	ENSXETG00000027221	-	100	97.024	Xenopus_tropicalis
ENSFDAG00000020016	-	99	79.363	ENSXETG00000010946	pabpc4	100	79.059	Xenopus_tropicalis
ENSFDAG00000020016	-	99	78.073	ENSXCOG00000013190	pabpc4	96	90.094	Xiphophorus_couchianus
ENSFDAG00000020016	-	100	79.192	ENSXMAG00000019007	pabpc4	100	79.940	Xiphophorus_maculatus