EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000020138 (Gene tree)
Gene ID: 104864784
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 260
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 31194 bases
Position: chrKN122248.1:9053837-9085030
Accession: 104864784
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000012822	zf-C2H2	PF00096.26	6.2e-74	1	15
ENSFDAP00000012822	zf-C2H2	PF00096.26	6.2e-74	2	15
ENSFDAP00000012822	zf-C2H2	PF00096.26	6.2e-74	3	15
ENSFDAP00000012822	zf-C2H2	PF00096.26	6.2e-74	4	15
ENSFDAP00000012822	zf-C2H2	PF00096.26	6.2e-74	5	15
ENSFDAP00000012822	zf-C2H2	PF00096.26	6.2e-74	6	15
ENSFDAP00000012822	zf-C2H2	PF00096.26	6.2e-74	7	15
ENSFDAP00000012822	zf-C2H2	PF00096.26	6.2e-74	8	15
ENSFDAP00000012822	zf-C2H2	PF00096.26	6.2e-74	9	15
ENSFDAP00000012822	zf-C2H2	PF00096.26	6.2e-74	10	15
ENSFDAP00000012822	zf-C2H2	PF00096.26	6.2e-74	11	15
ENSFDAP00000012822	zf-C2H2	PF00096.26	6.2e-74	12	15
ENSFDAP00000012822	zf-C2H2	PF00096.26	6.2e-74	13	15
ENSFDAP00000012822	zf-C2H2	PF00096.26	6.2e-74	14	15
ENSFDAP00000012822	zf-C2H2	PF00096.26	6.2e-74	15	15
ENSFDAP00000012822	zf-met	PF12874.7	2.1e-22	1	5
ENSFDAP00000012822	zf-met	PF12874.7	2.1e-22	2	5
ENSFDAP00000012822	zf-met	PF12874.7	2.1e-22	3	5
ENSFDAP00000012822	zf-met	PF12874.7	2.1e-22	4	5
ENSFDAP00000012822	zf-met	PF12874.7	2.1e-22	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000025555	-	4084	XM_010627995	ENSFDAP00000012822	803 (aa)	XP_010626297	UPI00053F59C1

Gene Model

Click here to download ENSFDAG00000020138's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000020138's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000020138	-	80	35.602	ENSFDAG00000003974	ZNF574	94	35.369
ENSFDAG00000020138	-	69	37.815	ENSFDAG00000016841	GTF3A	81	35.338
ENSFDAG00000020138	-	81	33.989	ENSFDAG00000020159	ZNF319	94	36.341
ENSFDAG00000020138	-	99	50.116	ENSFDAG00000015590	ZNF235	99	50.116
ENSFDAG00000020138	-	99	47.597	ENSFDAG00000008114	ZNF81	98	45.259
ENSFDAG00000020138	-	70	43.636	ENSFDAG00000013872	ZIC1	59	43.636
ENSFDAG00000020138	-	99	81.242	ENSFDAG00000005609	-	99	81.242
ENSFDAG00000020138	-	99	39.515	ENSFDAG00000009594	-	95	42.021
ENSFDAG00000020138	-	69	37.981	ENSFDAG00000019359	-	78	37.981
ENSFDAG00000020138	-	69	44.531	ENSFDAG00000019296	-	100	44.531
ENSFDAG00000020138	-	61	35.088	ENSFDAG00000008730	OVOL2	70	35.088
ENSFDAG00000020138	-	66	43.636	ENSFDAG00000014929	ZIC3	59	43.636
ENSFDAG00000020138	-	92	47.611	ENSFDAG00000010369	-	96	47.611
ENSFDAG00000020138	-	56	40.000	ENSFDAG00000010852	-	92	40.000
ENSFDAG00000020138	-	99	54.656	ENSFDAG00000008549	ZNF2	96	54.656
ENSFDAG00000020138	-	63	38.060	ENSFDAG00000008733	SCRT1	61	38.060
ENSFDAG00000020138	-	69	33.250	ENSFDAG00000010005	ZFP64	71	32.398
ENSFDAG00000020138	-	69	90.667	ENSFDAG00000006075	-	100	90.667
ENSFDAG00000020138	-	75	41.250	ENSFDAG00000016582	ZNF398	90	41.250
ENSFDAG00000020138	-	64	43.478	ENSFDAG00000005614	PATZ1	54	30.539
ENSFDAG00000020138	-	84	50.237	ENSFDAG00000005159	-	80	46.890
ENSFDAG00000020138	-	84	54.730	ENSFDAG00000008687	-	97	54.730
ENSFDAG00000020138	-	69	37.778	ENSFDAG00000016560	ZNF521	97	37.778
ENSFDAG00000020138	-	65	41.481	ENSFDAG00000016958	SNAI2	55	41.481
ENSFDAG00000020138	-	70	41.573	ENSFDAG00000007103	ZNF236	67	41.573
ENSFDAG00000020138	-	64	40.678	ENSFDAG00000006720	WT1	58	40.678
ENSFDAG00000020138	-	81	41.016	ENSFDAG00000021361	PRDM5	94	47.312
ENSFDAG00000020138	-	99	48.118	ENSFDAG00000015190	-	98	48.118
ENSFDAG00000020138	-	70	34.483	ENSFDAG00000012603	ZNF423	94	34.444

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000020138	-	92	69.072	ENSCLAG00000001377	-	99	71.576	Chinchilla_lanigera
ENSFDAG00000020138	-	99	53.213	ENSCGRG00001010752	2610008E11Rik	95	52.916	Cricetulus_griseus_chok1gshd
ENSFDAG00000020138	-	99	53.213	ENSCGRG00000008922	2610008E11Rik	95	52.916	Cricetulus_griseus_crigri
ENSFDAG00000020138	-	99	74.259	ENSHGLG00000001150	-	99	77.224	Heterocephalus_glaber_female
ENSFDAG00000020138	-	97	83.184	ENSHGLG00100005328	-	99	83.184	Heterocephalus_glaber_male
ENSFDAG00000020138	-	99	74.259	ENSHGLG00100009889	-	99	77.224	Heterocephalus_glaber_male
ENSFDAG00000020138	-	99	53.213	ENSMAUG00000007597	2610008E11Rik	97	52.484	Mesocricetus_auratus
ENSFDAG00000020138	-	85	58.000	ENSNGAG00000014809	2610008E11Rik	90	55.668	Nannospalax_galili
ENSFDAG00000020138	-	99	53.069	ENSOCUG00000027634	-	96	54.670	Oryctolagus_cuniculus
ENSFDAG00000020138	-	94	58.000	ENSRNOG00000014331	Zfp810	99	58.000	Rattus_norvegicus