EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000020306 (Gene tree)
Gene ID: 104869729
Gene Symbol: SAFB
Alias: HET|SAFB1
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 29910 bases
Position: chrKN122676.1:2868654-2898563
Accession: 104869729
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000012976	RRM_5	PF13893.6	2.3e-06	1	1
ENSFDAP00000012976	RRM_1	PF00076.22	1.8e-13	1	1
ENSFDAP00000012976	SAP	PF02037.27	6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000025719	SAFB-201	2412	XM_010635077	ENSFDAP00000012976	803 (aa)	-	-

Gene Model

Click here to download ENSFDAG00000020306's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000020306's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000020306	SAFB	100	60.264	ENSFDAG00000020009	SAFB2	93	63.446

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000020306	SAFB	100	88.732	ENSG00000160633	SAFB	100	83.333	Homo_sapiens
ENSFDAG00000020306	SAFB	100	85.933	ENSAMEG00000012254	SAFB	95	81.392	Ailuropoda_melanoleuca
ENSFDAG00000020306	SAFB	74	41.857	ENSACIG00000006247	safb	95	37.709	Amphilophus_citrinellus
ENSFDAG00000020306	SAFB	74	43.230	ENSAOCG00000006308	safb	77	57.463	Amphiprion_ocellaris
ENSFDAG00000020306	SAFB	89	68.675	ENSAPLG00000006355	-	99	68.675	Anas_platyrhynchos
ENSFDAG00000020306	SAFB	92	62.814	ENSAPLG00000005780	-	89	62.814	Anas_platyrhynchos
ENSFDAG00000020306	SAFB	100	87.950	ENSANAG00000028821	SAFB	100	82.609	Aotus_nancymaae
ENSFDAG00000020306	SAFB	66	56.557	ENSACLG00000001926	safb	51	56.098	Astatotilapia_calliptera
ENSFDAG00000020306	SAFB	77	43.087	ENSAMXG00000018154	safb	67	42.508	Astyanax_mexicanus
ENSFDAG00000020306	SAFB	100	85.915	ENSBTAG00000007875	SAFB	96	81.487	Bos_taurus
ENSFDAG00000020306	SAFB	78	92.925	ENSCJAG00000017081	SAFB	100	92.925	Callithrix_jacchus
ENSFDAG00000020306	SAFB	100	87.926	ENSCAFG00000018803	SAFB	83	82.621	Canis_familiaris
ENSFDAG00000020306	SAFB	100	87.270	ENSCAFG00020018943	SAFB	100	69.914	Canis_lupus_dingo
ENSFDAG00000020306	SAFB	100	84.351	ENSCHIG00000007262	SAFB	98	89.623	Capra_hircus
ENSFDAG00000020306	SAFB	50	82.576	ENSTSYG00000001851	-	86	82.576	Carlito_syrichta
ENSFDAG00000020306	SAFB	92	89.207	ENSCAPG00000012121	SAFB	100	89.467	Cavia_aperea
ENSFDAG00000020306	SAFB	99	92.283	ENSCPOG00000026322	SAFB	96	86.241	Cavia_porcellus
ENSFDAG00000020306	SAFB	100	88.281	ENSCCAG00000020193	SAFB	100	82.609	Cebus_capucinus
ENSFDAG00000020306	SAFB	100	88.419	ENSCATG00000029994	SAFB	100	82.609	Cercocebus_atys
ENSFDAG00000020306	SAFB	99	97.297	ENSCLAG00000007734	SAFB	95	90.558	Chinchilla_lanigera
ENSFDAG00000020306	SAFB	100	88.419	ENSCSAG00000009949	SAFB	100	74.759	Chlorocebus_sabaeus
ENSFDAG00000020306	SAFB	83	93.750	ENSCHOG00000003208	SAFB	92	94.000	Choloepus_hoffmanni
ENSFDAG00000020306	SAFB	88	59.113	ENSCPBG00000010936	-	94	59.113	Chrysemys_picta_bellii
ENSFDAG00000020306	SAFB	89	63.317	ENSCPBG00000010928	-	88	63.317	Chrysemys_picta_bellii
ENSFDAG00000020306	SAFB	100	70.054	ENSCANG00000019754	-	100	71.351	Colobus_angolensis_palliatus
ENSFDAG00000020306	SAFB	100	85.340	ENSCANG00000004774	-	100	85.936	Colobus_angolensis_palliatus
ENSFDAG00000020306	SAFB	99	81.847	ENSCGRG00001002254	Safb	100	77.000	Cricetulus_griseus_chok1gshd
ENSFDAG00000020306	SAFB	88	77.661	ENSCGRG00000011529	Safb	96	77.000	Cricetulus_griseus_crigri
ENSFDAG00000020306	SAFB	53	50.340	ENSCVAG00000002226	safb	59	50.340	Cyprinodon_variegatus
ENSFDAG00000020306	SAFB	75	39.297	ENSDARG00000020467	safb	60	60.000	Danio_rerio
ENSFDAG00000020306	SAFB	100	87.969	ENSDNOG00000015746	SAFB	89	80.595	Dasypus_novemcinctus
ENSFDAG00000020306	SAFB	99	89.655	ENSDORG00000016200	Safb	94	89.655	Dipodomys_ordii
ENSFDAG00000020306	SAFB	72	86.111	ENSETEG00000018679	SAFB	81	72.445	Echinops_telfairi
ENSFDAG00000020306	SAFB	100	82.261	ENSEASG00005023019	SAFB	95	80.513	Equus_asinus_asinus
ENSFDAG00000020306	SAFB	100	83.912	ENSECAG00000018659	SAFB	87	78.459	Equus_caballus
ENSFDAG00000020306	SAFB	95	43.800	ENSELUG00000022327	safb	87	50.000	Esox_lucius
ENSFDAG00000020306	SAFB	100	87.730	ENSFCAG00000011835	SAFB	95	83.048	Felis_catus
ENSFDAG00000020306	SAFB	99	62.814	ENSFALG00000013882	-	82	62.814	Ficedula_albicollis
ENSFDAG00000020306	SAFB	88	56.846	ENSFALG00000013881	-	99	57.143	Ficedula_albicollis
ENSFDAG00000020306	SAFB	99	59.606	ENSGALG00000001948	-	96	59.606	Gallus_gallus
ENSFDAG00000020306	SAFB	78	60.568	ENSGALG00000013365	-	68	60.436	Gallus_gallus
ENSFDAG00000020306	SAFB	96	66.667	ENSGAGG00000008424	-	92	66.667	Gopherus_agassizii
ENSFDAG00000020306	SAFB	100	88.419	ENSGGOG00000015109	SAFB	100	83.333	Gorilla_gorilla
ENSFDAG00000020306	SAFB	59	49.138	ENSHBUG00000009218	safb	79	48.333	Haplochromis_burtoni
ENSFDAG00000020306	SAFB	99	97.774	ENSHGLG00000015883	SAFB	95	91.130	Heterocephalus_glaber_female
ENSFDAG00000020306	SAFB	100	92.471	ENSHGLG00100004228	SAFB	100	92.471	Heterocephalus_glaber_male
ENSFDAG00000020306	SAFB	84	44.348	ENSHCOG00000001705	safb	78	48.696	Hippocampus_comes
ENSFDAG00000020306	SAFB	91	92.945	ENSSTOG00000002783	SAFB	95	86.185	Ictidomys_tridecemlineatus
ENSFDAG00000020306	SAFB	99	84.062	ENSJJAG00000009021	Safb	100	80.500	Jaculus_jaculus
ENSFDAG00000020306	SAFB	74	43.301	ENSLBEG00000006015	safb	78	45.333	Labrus_bergylta
ENSFDAG00000020306	SAFB	94	52.532	ENSLACG00000018090	SAFB	89	49.923	Latimeria_chalumnae
ENSFDAG00000020306	SAFB	88	56.364	ENSLOCG00000003613	safb	87	56.364	Lepisosteus_oculatus
ENSFDAG00000020306	SAFB	97	87.717	ENSLAFG00000003840	SAFB	100	69.173	Loxodonta_africana
ENSFDAG00000020306	SAFB	100	88.281	ENSMFAG00000003885	SAFB	100	82.609	Macaca_fascicularis
ENSFDAG00000020306	SAFB	100	88.419	ENSMMUG00000017970	SAFB	100	82.609	Macaca_mulatta
ENSFDAG00000020306	SAFB	100	82.969	ENSMNEG00000035637	SAFB	100	83.582	Macaca_nemestrina
ENSFDAG00000020306	SAFB	100	81.005	ENSMLEG00000038637	SAFB	88	93.548	Mandrillus_leucophaeus
ENSFDAG00000020306	SAFB	66	56.557	ENSMZEG00005009120	safb	79	45.333	Maylandia_zebra
ENSFDAG00000020306	SAFB	75	56.954	ENSMGAG00000001101	-	66	58.170	Meleagris_gallopavo
ENSFDAG00000020306	SAFB	90	73.000	ENSMGAG00000001051	-	100	73.000	Meleagris_gallopavo
ENSFDAG00000020306	SAFB	100	85.290	ENSMICG00000008739	-	100	80.435	Microcebus_murinus
ENSFDAG00000020306	SAFB	87	95.000	ENSMICG00000046795	-	98	95.000	Microcebus_murinus
ENSFDAG00000020306	SAFB	99	82.288	ENSMOCG00000014040	Safb	100	76.000	Microtus_ochrogaster
ENSFDAG00000020306	SAFB	100	70.472	ENSMODG00000001236	SAFB	92	68.101	Monodelphis_domestica
ENSFDAG00000020306	SAFB	91	51.128	ENSMALG00000020330	safb	83	48.993	Monopterus_albus
ENSFDAG00000020306	SAFB	99	82.575	MGP_CAROLIEiJ_G0021780	Safb	100	78.500	Mus_caroli
ENSFDAG00000020306	SAFB	99	82.418	ENSMUSG00000071054	Safb	100	78.500	Mus_musculus
ENSFDAG00000020306	SAFB	99	82.567	MGP_PahariEiJ_G0020769	Safb	95	87.192	Mus_pahari
ENSFDAG00000020306	SAFB	100	86.810	ENSMPUG00000006123	SAFB	90	82.194	Mustela_putorius_furo
ENSFDAG00000020306	SAFB	99	88.170	ENSMLUG00000001081	SAFB	100	70.299	Myotis_lucifugus
ENSFDAG00000020306	SAFB	97	87.582	ENSNGAG00000019882	Safb	100	81.538	Nannospalax_galili
ENSFDAG00000020306	SAFB	98	88.576	ENSNLEG00000013551	SAFB	99	82.609	Nomascus_leucogenys
ENSFDAG00000020306	SAFB	88	81.449	ENSOPRG00000011561	-	95	81.290	Ochotona_princeps
ENSFDAG00000020306	SAFB	100	97.302	ENSODEG00000014838	SAFB	96	90.714	Octodon_degus
ENSFDAG00000020306	SAFB	89	82.801	ENSOCUG00000014628	SAFB	90	82.801	Oryctolagus_cuniculus
ENSFDAG00000020306	SAFB	75	39.080	ENSORLG00020000404	safb	78	41.775	Oryzias_latipes_hni
ENSFDAG00000020306	SAFB	99	85.804	ENSOGAG00000027769	SAFB	100	68.602	Otolemur_garnettii
ENSFDAG00000020306	SAFB	100	85.446	ENSOARG00000007662	-	100	76.471	Ovis_aries
ENSFDAG00000020306	SAFB	75	79.305	ENSOARG00000007856	-	84	79.305	Ovis_aries
ENSFDAG00000020306	SAFB	100	88.438	ENSPPAG00000035129	SAFB	100	83.333	Pan_paniscus
ENSFDAG00000020306	SAFB	81	87.730	ENSPPRG00000017197	SAFB	74	83.048	Panthera_pardus
ENSFDAG00000020306	SAFB	100	88.438	ENSPTRG00000010335	SAFB	100	83.333	Pan_troglodytes
ENSFDAG00000020306	SAFB	100	88.125	ENSPANG00000007770	SAFB	100	82.609	Papio_anubis
ENSFDAG00000020306	SAFB	93	48.905	ENSPKIG00000009902	safb	87	43.701	Paramormyrops_kingsleyae
ENSFDAG00000020306	SAFB	99	59.606	ENSPSIG00000011679	-	95	59.606	Pelodiscus_sinensis
ENSFDAG00000020306	SAFB	99	62.814	ENSPSIG00000009367	-	86	62.814	Pelodiscus_sinensis
ENSFDAG00000020306	SAFB	99	83.203	ENSPEMG00000020428	Safb	100	76.500	Peromyscus_maniculatus_bairdii
ENSFDAG00000020306	SAFB	50	79.668	ENSPCIG00000009504	-	85	74.419	Phascolarctos_cinereus
ENSFDAG00000020306	SAFB	72	54.032	ENSPFOG00000007745	safb	94	40.411	Poecilia_formosa
ENSFDAG00000020306	SAFB	75	39.123	ENSPLAG00000001614	safb	71	37.690	Poecilia_latipinna
ENSFDAG00000020306	SAFB	100	88.732	ENSPPYG00000009428	SAFB	100	74.866	Pongo_abelii
ENSFDAG00000020306	SAFB	99	82.306	ENSPCAG00000006475	SAFB	92	79.850	Procavia_capensis
ENSFDAG00000020306	SAFB	100	82.473	ENSPCOG00000014090	SAFB	100	66.308	Propithecus_coquereli
ENSFDAG00000020306	SAFB	99	82.965	ENSPVAG00000004913	SAFB	100	72.645	Pteropus_vampyrus
ENSFDAG00000020306	SAFB	53	55.396	ENSPNAG00000021838	safb	86	51.299	Pygocentrus_nattereri
ENSFDAG00000020306	SAFB	99	84.119	ENSRNOG00000050543	Safb	100	78.000	Rattus_norvegicus
ENSFDAG00000020306	SAFB	95	80.851	ENSRBIG00000042509	SAFB	88	94.624	Rhinopithecus_bieti
ENSFDAG00000020306	SAFB	100	88.594	ENSRROG00000029278	SAFB	100	83.333	Rhinopithecus_roxellana
ENSFDAG00000020306	SAFB	100	88.419	ENSSBOG00000026291	SAFB	100	82.609	Saimiri_boliviensis_boliviensis
ENSFDAG00000020306	SAFB	99	45.685	ENSSFOG00015008156	safb	83	47.429	Scleropages_formosus
ENSFDAG00000020306	SAFB	66	58.103	ENSSDUG00000009652	safb	61	56.322	Seriola_dumerili
ENSFDAG00000020306	SAFB	80	64.198	ENSSPUG00000009820	-	93	64.198	Sphenodon_punctatus
ENSFDAG00000020306	SAFB	61	59.592	ENSSPAG00000015682	safb	59	58.635	Stegastes_partitus
ENSFDAG00000020306	SAFB	99	86.977	ENSSSCG00000013522	SAFB	99	96.721	Sus_scrofa
ENSFDAG00000020306	SAFB	95	72.662	ENSTGUG00000000489	-	100	72.662	Taeniopygia_guttata
ENSFDAG00000020306	SAFB	97	70.064	ENSTGUG00000000502	-	88	70.064	Taeniopygia_guttata
ENSFDAG00000020306	SAFB	74	42.295	ENSTRUG00000003567	safb	68	39.692	Takifugu_rubripes
ENSFDAG00000020306	SAFB	90	51.240	ENSTNIG00000015470	safb	88	51.240	Tetraodon_nigroviridis
ENSFDAG00000020306	SAFB	62	83.582	ENSTBEG00000013124	-	62	83.582	Tupaia_belangeri
ENSFDAG00000020306	SAFB	91	96.825	ENSTTRG00000013588	SAFB	88	96.825	Tursiops_truncatus
ENSFDAG00000020306	SAFB	76	81.659	ENSUAMG00000024543	SAFB	88	76.617	Ursus_americanus
ENSFDAG00000020306	SAFB	99	77.300	ENSUMAG00000009734	SAFB	85	91.919	Ursus_maritimus
ENSFDAG00000020306	SAFB	66	89.873	ENSVPAG00000012043	SAFB	67	88.136	Vicugna_pacos
ENSFDAG00000020306	SAFB	100	87.771	ENSVVUG00000013720	SAFB	83	82.479	Vulpes_vulpes
ENSFDAG00000020306	SAFB	95	50.318	ENSXETG00000008755	safb	95	49.080	Xenopus_tropicalis
ENSFDAG00000020306	SAFB	50	51.220	ENSXMAG00000003458	safb	55	51.220	Xiphophorus_maculatus