EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000020541 (Gene tree)
Gene ID: 104859167
Gene Symbol: -
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 92328 bases
Position: chrKN121850.1:15896027-15988354
Accession: 104859167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000013209	ResIII	PF04851.15	1.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000026016	-	2938	XM_010619671	ENSFDAP00000013209	908 (aa)	XP_010617973	-

Gene Model

Click here to download ENSFDAG00000020541's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000020541's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000020541	-	61	31.429	ENSFDAG00000021016	SMARCA5	51	31.607
ENSFDAG00000020541	-	55	32.302	ENSFDAG00000012431	CHD1L	53	32.302
ENSFDAG00000020541	-	59	32.446	ENSFDAG00000000805	ERCC6L2	83	32.280
ENSFDAG00000020541	-	60	32.394	ENSFDAG00000009818	SMARCA1	50	32.394
ENSFDAG00000020541	-	72	44.078	ENSFDAG00000007806	RAD54L	84	44.078

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000020541	-	100	86.029	ENSG00000197275	RAD54B	99	86.029	Homo_sapiens
ENSFDAG00000020541	-	80	88.536	ENSG00000265817	FSBP	98	89.124	Homo_sapiens
ENSFDAG00000020541	-	100	84.396	ENSAMEG00000005834	-	99	84.396	Ailuropoda_melanoleuca
ENSFDAG00000020541	-	100	55.011	ENSACIG00000013005	rad54b	99	55.011	Amphilophus_citrinellus
ENSFDAG00000020541	-	100	54.931	ENSAOCG00000008523	rad54b	99	54.931	Amphiprion_ocellaris
ENSFDAG00000020541	-	100	55.263	ENSAPEG00000001673	rad54b	99	55.373	Amphiprion_percula
ENSFDAG00000020541	-	99	54.189	ENSATEG00000001527	rad54b	99	54.189	Anabas_testudineus
ENSFDAG00000020541	-	100	69.022	ENSAPLG00000014366	-	99	69.022	Anas_platyrhynchos
ENSFDAG00000020541	-	88	70.088	ENSACAG00000003671	-	99	70.088	Anolis_carolinensis
ENSFDAG00000020541	-	71	88.408	ENSANAG00000019528	-	99	88.408	Aotus_nancymaae
ENSFDAG00000020541	-	100	55.229	ENSACLG00000007826	rad54b	99	55.229	Astatotilapia_calliptera
ENSFDAG00000020541	-	86	57.107	ENSAMXG00000039985	rad54b	94	56.858	Astyanax_mexicanus
ENSFDAG00000020541	-	100	82.068	ENSBTAG00000000632	RAD54B	99	82.068	Bos_taurus
ENSFDAG00000020541	-	78	35.333	WBGene00013792	Y116A8C.13	74	39.273	Caenorhabditis_elegans
ENSFDAG00000020541	-	100	85.039	ENSCJAG00000000080	-	98	88.136	Callithrix_jacchus
ENSFDAG00000020541	-	100	82.527	ENSCAFG00000009179	RAD54B	99	82.527	Canis_familiaris
ENSFDAG00000020541	-	100	82.418	ENSCAFG00020012084	-	99	82.418	Canis_lupus_dingo
ENSFDAG00000020541	-	100	81.958	ENSCHIG00000008230	-	99	81.958	Capra_hircus
ENSFDAG00000020541	-	100	85.369	ENSTSYG00000013234	-	99	85.369	Carlito_syrichta
ENSFDAG00000020541	-	100	89.868	ENSCPOG00000011643	-	99	89.868	Cavia_porcellus
ENSFDAG00000020541	-	100	85.149	ENSCCAG00000011754	-	98	88.136	Cebus_capucinus
ENSFDAG00000020541	-	100	85.259	ENSCATG00000030661	-	98	88.418	Cercocebus_atys
ENSFDAG00000020541	-	100	90.308	ENSCLAG00000010476	-	99	90.308	Chinchilla_lanigera
ENSFDAG00000020541	-	100	85.039	ENSCSAG00000012712	-	99	85.039	Chlorocebus_sabaeus
ENSFDAG00000020541	-	100	69.730	ENSCPBG00000003204	-	99	70.210	Chrysemys_picta_bellii
ENSFDAG00000020541	-	100	85.039	ENSCANG00000017939	-	98	88.136	Colobus_angolensis_palliatus
ENSFDAG00000020541	-	99	79.075	ENSCGRG00001020184	Rad54b	99	79.075	Cricetulus_griseus_chok1gshd
ENSFDAG00000020541	-	99	77.753	ENSCGRG00000016752	Rad54b	99	77.753	Cricetulus_griseus_crigri
ENSFDAG00000020541	-	91	73.333	ENSCSEG00000001601	rad54b	95	57.248	Cynoglossus_semilaevis
ENSFDAG00000020541	-	100	56.095	ENSCVAG00000009200	rad54b	99	55.987	Cyprinodon_variegatus
ENSFDAG00000020541	-	99	52.530	ENSDARG00000092134	rad54b	99	59.815	Danio_rerio
ENSFDAG00000020541	-	99	81.888	ENSDNOG00000015535	-	99	81.888	Dasypus_novemcinctus
ENSFDAG00000020541	-	100	83.040	ENSDORG00000002492	Rad54b	99	83.040	Dipodomys_ordii
ENSFDAG00000020541	-	87	79.949	ENSETEG00000010605	-	100	79.949	Echinops_telfairi
ENSFDAG00000020541	-	99	47.414	ENSEBUG00000009104	rad54b	98	47.594	Eptatretus_burgeri
ENSFDAG00000020541	-	97	83.428	ENSEASG00005004021	-	99	83.428	Equus_asinus_asinus
ENSFDAG00000020541	-	100	83.921	ENSECAG00000021949	-	99	83.921	Equus_caballus
ENSFDAG00000020541	-	83	84.906	ENSEEUG00000008056	-	83	84.906	Erinaceus_europaeus
ENSFDAG00000020541	-	99	54.216	ENSELUG00000009287	rad54b	99	54.216	Esox_lucius
ENSFDAG00000020541	-	100	84.286	ENSFCAG00000015513	-	98	87.429	Felis_catus
ENSFDAG00000020541	-	100	67.500	ENSFALG00000005467	-	99	67.500	Ficedula_albicollis
ENSFDAG00000020541	-	98	54.295	ENSFHEG00000014382	rad54b	98	54.295	Fundulus_heteroclitus
ENSFDAG00000020541	-	87	56.398	ENSGMOG00000014774	rad54b	99	56.398	Gadus_morhua
ENSFDAG00000020541	-	100	68.197	ENSGALG00000043597	RAD54B	99	68.197	Gallus_gallus
ENSFDAG00000020541	-	99	56.154	ENSGAFG00000007901	rad54b	99	56.154	Gambusia_affinis
ENSFDAG00000020541	-	100	54.477	ENSGACG00000009128	rad54b	99	54.477	Gasterosteus_aculeatus
ENSFDAG00000020541	-	99	69.156	ENSGAGG00000018747	-	99	69.156	Gopherus_agassizii
ENSFDAG00000020541	-	100	85.479	ENSGGOG00000023516	-	99	85.479	Gorilla_gorilla
ENSFDAG00000020541	-	100	54.313	ENSHBUG00000016017	rad54b	99	54.313	Haplochromis_burtoni
ENSFDAG00000020541	-	100	92.560	ENSHGLG00000008263	RAD54B	99	92.560	Heterocephalus_glaber_female
ENSFDAG00000020541	-	100	91.739	ENSHGLG00100008108	-	99	91.739	Heterocephalus_glaber_male
ENSFDAG00000020541	-	99	53.720	ENSHCOG00000004764	rad54b	98	55.748	Hippocampus_comes
ENSFDAG00000020541	-	99	52.201	ENSIPUG00000018531	rad54b	99	52.292	Ictalurus_punctatus
ENSFDAG00000020541	-	99	84.292	ENSSTOG00000010791	-	99	84.292	Ictidomys_tridecemlineatus
ENSFDAG00000020541	-	100	80.727	ENSJJAG00000010314	Rad54b	99	80.727	Jaculus_jaculus
ENSFDAG00000020541	-	87	57.764	ENSKMAG00000004744	rad54b	93	57.764	Kryptolebias_marmoratus
ENSFDAG00000020541	-	78	73.846	ENSLACG00000000859	-	100	69.035	Latimeria_chalumnae
ENSFDAG00000020541	-	99	56.990	ENSLOCG00000010100	rad54b	94	62.578	Lepisosteus_oculatus
ENSFDAG00000020541	-	89	84.243	ENSLAFG00000015315	-	99	84.243	Loxodonta_africana
ENSFDAG00000020541	-	100	85.259	ENSMFAG00000031629	-	98	88.277	Macaca_fascicularis
ENSFDAG00000020541	-	100	85.259	ENSMMUG00000005659	-	99	85.259	Macaca_mulatta
ENSFDAG00000020541	-	100	85.132	ENSMNEG00000016408	-	99	85.132	Macaca_nemestrina
ENSFDAG00000020541	-	100	85.259	ENSMLEG00000006946	-	99	85.259	Mandrillus_leucophaeus
ENSFDAG00000020541	-	99	54.989	ENSMAMG00000012269	rad54b	99	54.989	Mastacembelus_armatus
ENSFDAG00000020541	-	100	54.313	ENSMZEG00005005281	rad54b	95	59.446	Maylandia_zebra
ENSFDAG00000020541	-	100	68.087	ENSMGAG00000012024	-	99	68.087	Meleagris_gallopavo
ENSFDAG00000020541	-	99	78.194	ENSMAUG00000013586	Rad54b	99	78.194	Mesocricetus_auratus
ENSFDAG00000020541	-	100	82.599	ENSMICG00000000754	-	99	82.599	Microcebus_murinus
ENSFDAG00000020541	-	99	77.974	ENSMOCG00000020035	Rad54b	99	77.974	Microtus_ochrogaster
ENSFDAG00000020541	-	99	54.054	ENSMMOG00000003394	rad54b	99	54.054	Mola_mola
ENSFDAG00000020541	-	88	76.463	ENSMODG00000007343	-	99	76.463	Monodelphis_domestica
ENSFDAG00000020541	-	71	59.568	ENSMALG00000001520	rad54b	99	59.568	Monopterus_albus
ENSFDAG00000020541	-	99	78.721	MGP_CAROLIEiJ_G0025810	Rad54b	99	78.721	Mus_caroli
ENSFDAG00000020541	-	99	78.390	ENSMUSG00000078773	Rad54b	99	78.390	Mus_musculus
ENSFDAG00000020541	-	99	78.942	MGP_PahariEiJ_G0023933	Rad54b	99	78.942	Mus_pahari
ENSFDAG00000020541	-	99	79.052	MGP_SPRETEiJ_G0026758	Rad54b	99	79.052	Mus_spretus
ENSFDAG00000020541	-	89	85.149	ENSMPUG00000008878	-	99	85.149	Mustela_putorius_furo
ENSFDAG00000020541	-	99	82.048	ENSMLUG00000008953	-	99	82.048	Myotis_lucifugus
ENSFDAG00000020541	-	99	81.928	ENSNGAG00000017537	Rad54b	99	81.928	Nannospalax_galili
ENSFDAG00000020541	-	100	54.476	ENSNBRG00000013394	rad54b	99	54.476	Neolamprologus_brichardi
ENSFDAG00000020541	-	100	86.029	ENSNLEG00000003062	-	97	88.842	Nomascus_leucogenys
ENSFDAG00000020541	-	71	72.886	ENSMEUG00000012426	-	71	72.886	Notamacropus_eugenii
ENSFDAG00000020541	-	100	89.317	ENSODEG00000019564	-	99	89.317	Octodon_degus
ENSFDAG00000020541	-	89	83.747	ENSODEG00000002650	-	99	92.188	Octodon_degus
ENSFDAG00000020541	-	100	55.135	ENSONIG00000006067	rad54b	99	55.135	Oreochromis_niloticus
ENSFDAG00000020541	-	83	76.431	ENSOANG00000011348	-	99	76.431	Ornithorhynchus_anatinus
ENSFDAG00000020541	-	100	82.618	ENSOCUG00000016478	-	99	82.618	Oryctolagus_cuniculus
ENSFDAG00000020541	-	99	55.080	ENSORLG00000008918	rad54b	99	61.941	Oryzias_latipes
ENSFDAG00000020541	-	71	61.941	ENSORLG00020012171	rad54b	99	61.941	Oryzias_latipes_hni
ENSFDAG00000020541	-	99	55.059	ENSORLG00015018536	rad54b	99	55.059	Oryzias_latipes_hsok
ENSFDAG00000020541	-	84	60.673	ENSOMEG00000004345	rad54b	99	60.673	Oryzias_melastigma
ENSFDAG00000020541	-	100	84.708	ENSOGAG00000007854	-	99	84.708	Otolemur_garnettii
ENSFDAG00000020541	-	89	84.815	ENSOARG00000007691	-	99	84.815	Ovis_aries
ENSFDAG00000020541	-	100	84.268	ENSPPAG00000029572	-	99	84.268	Pan_paniscus
ENSFDAG00000020541	-	100	84.505	ENSPPRG00000007571	-	98	87.571	Panthera_pardus
ENSFDAG00000020541	-	80	87.293	ENSPTIG00000012670	-	98	87.712	Panthera_tigris_altaica
ENSFDAG00000020541	-	100	85.919	ENSPTRG00000020427	-	98	88.983	Pan_troglodytes
ENSFDAG00000020541	-	100	85.369	ENSPANG00000019566	-	99	85.369	Papio_anubis
ENSFDAG00000020541	-	99	57.361	ENSPKIG00000014974	rad54b	99	57.361	Paramormyrops_kingsleyae
ENSFDAG00000020541	-	100	67.861	ENSPSIG00000002383	-	98	73.724	Pelodiscus_sinensis
ENSFDAG00000020541	-	99	79.075	ENSPEMG00000012133	Rad54b	99	79.075	Peromyscus_maniculatus_bairdii
ENSFDAG00000020541	-	87	58.427	ENSPMAG00000002916	rad54b	99	58.427	Petromyzon_marinus
ENSFDAG00000020541	-	89	77.640	ENSPCIG00000020151	-	94	77.239	Phascolarctos_cinereus
ENSFDAG00000020541	-	99	55.485	ENSPFOG00000023411	rad54b	99	55.485	Poecilia_formosa
ENSFDAG00000020541	-	99	55.698	ENSPLAG00000010430	rad54b	99	55.698	Poecilia_latipinna
ENSFDAG00000020541	-	99	55.698	ENSPMEG00000016873	rad54b	99	55.698	Poecilia_mexicana
ENSFDAG00000020541	-	99	55.700	ENSPREG00000018443	rad54b	99	55.700	Poecilia_reticulata
ENSFDAG00000020541	-	100	85.589	ENSPPYG00000018750	-	99	85.589	Pongo_abelii
ENSFDAG00000020541	-	100	86.909	ENSPCOG00000026845	-	98	88.701	Propithecus_coquereli
ENSFDAG00000020541	-	87	87.027	ENSPVAG00000000261	-	91	87.027	Pteropus_vampyrus
ENSFDAG00000020541	-	87	59.142	ENSPNYG00000018303	rad54b	96	59.142	Pundamilia_nyererei
ENSFDAG00000020541	-	99	53.622	ENSPNAG00000000295	rad54b	99	53.622	Pygocentrus_nattereri
ENSFDAG00000020541	-	99	76.432	ENSRNOG00000039949	Rad54b	99	76.432	Rattus_norvegicus
ENSFDAG00000020541	-	100	84.818	ENSRBIG00000020419	-	99	84.818	Rhinopithecus_bieti
ENSFDAG00000020541	-	100	84.818	ENSRROG00000039897	-	99	84.818	Rhinopithecus_roxellana
ENSFDAG00000020541	-	82	36.308	YBR073W	RDH54	67	40.774	Saccharomyces_cerevisiae
ENSFDAG00000020541	-	100	85.259	ENSSBOG00000028501	-	99	85.259	Saimiri_boliviensis_boliviensis
ENSFDAG00000020541	-	99	73.436	ENSSHAG00000017038	-	99	73.436	Sarcophilus_harrisii
ENSFDAG00000020541	-	63	64.737	ENSSFOG00015008483	rad54b	88	64.737	Scleropages_formosus
ENSFDAG00000020541	-	99	53.263	ENSSMAG00000018659	rad54b	99	54.545	Scophthalmus_maximus
ENSFDAG00000020541	-	99	53.757	ENSSDUG00000001122	rad54b	98	53.651	Seriola_dumerili
ENSFDAG00000020541	-	100	53.403	ENSSLDG00000013787	rad54b	99	53.298	Seriola_lalandi_dorsalis
ENSFDAG00000020541	-	100	67.873	ENSSPUG00000016497	-	99	67.873	Sphenodon_punctatus
ENSFDAG00000020541	-	100	55.447	ENSSPAG00000012800	rad54b	99	55.447	Stegastes_partitus
ENSFDAG00000020541	-	100	81.718	ENSSSCG00000006101	-	99	85.445	Sus_scrofa
ENSFDAG00000020541	-	100	66.810	ENSTGUG00000011880	-	99	66.810	Taeniopygia_guttata
ENSFDAG00000020541	-	99	52.954	ENSTRUG00000010015	rad54b	99	53.545	Takifugu_rubripes
ENSFDAG00000020541	-	100	80.528	ENSTTRG00000006312	-	99	80.528	Tursiops_truncatus
ENSFDAG00000020541	-	100	84.396	ENSUMAG00000016401	-	99	84.396	Ursus_maritimus
ENSFDAG00000020541	-	100	81.888	ENSVPAG00000003157	-	99	81.888	Vicugna_pacos
ENSFDAG00000020541	-	99	55.592	ENSXETG00000025924	rad54b	99	60.224	Xenopus_tropicalis
ENSFDAG00000020541	-	99	55.873	ENSXMAG00000013141	rad54b	99	55.873	Xiphophorus_maculatus