EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000020660 (Gene tree)
Gene ID: 104850284
Gene Symbol: -
Alias: -
Full Name: DEAD-box helicase 53
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 2405 bases
Position: chrKN124084.1:2513311-2515715
Accession: 104850284
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000013330	ResIII	PF04851.15	5.1e-06	1	1
ENSFDAP00000013330	DEAD	PF00270.29	3e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000026183	-	1858	XM_010607136	ENSFDAP00000013330	513 (aa)	XP_010605438	UPI00053FD73C

Gene Model

Click here to download ENSFDAG00000020660's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000020660's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000020660	-	72	33.246	ENSFDAG00000011064	DDX49	79	33.246
ENSFDAG00000020660	-	86	34.234	ENSFDAG00000017549	-	74	34.234
ENSFDAG00000020660	-	68	31.818	ENSFDAG00000020774	EIF4A3	84	31.818
ENSFDAG00000020660	-	56	71.080	ENSFDAG00000018215	-	62	71.080
ENSFDAG00000020660	-	74	37.215	ENSFDAG00000017597	DDX41	62	37.245
ENSFDAG00000020660	-	66	30.591	ENSFDAG00000007853	DDX31	56	30.591
ENSFDAG00000020660	-	96	34.476	ENSFDAG00000020516	DDX42	51	34.476
ENSFDAG00000020660	-	73	36.317	ENSFDAG00000011500	-	61	36.118
ENSFDAG00000020660	-	68	35.196	ENSFDAG00000016109	-	51	35.196
ENSFDAG00000020660	-	85	34.157	ENSFDAG00000010141	DDX59	69	34.157
ENSFDAG00000020660	-	86	40.315	ENSFDAG00000019420	-	74	39.440
ENSFDAG00000020660	-	86	41.480	ENSFDAG00000009967	DDX17	69	41.480
ENSFDAG00000020660	-	71	30.220	ENSFDAG00000008700	-	88	30.220
ENSFDAG00000020660	-	78	31.463	ENSFDAG00000018286	-	51	30.022
ENSFDAG00000020660	-	76	32.274	ENSFDAG00000014635	-	87	32.274
ENSFDAG00000020660	-	71	32.329	ENSFDAG00000006475	EIF4A2	88	32.329
ENSFDAG00000020660	-	86	37.238	ENSFDAG00000017059	DDX23	55	37.395
ENSFDAG00000020660	-	84	31.303	ENSFDAG00000008340	-	77	31.303
ENSFDAG00000020660	-	75	37.215	ENSFDAG00000003703	DDX4	54	37.467
ENSFDAG00000020660	-	68	30.791	ENSFDAG00000012457	DDX6	71	30.791
ENSFDAG00000020660	-	76	36.232	ENSFDAG00000013328	DDX3Y	64	36.232

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000020660	-	99	67.969	ENSAMEG00000019953	-	84	67.969	Ailuropoda_melanoleuca
ENSFDAG00000020660	-	91	71.092	ENSBTAG00000046635	-	75	71.092	Bos_taurus
ENSFDAG00000020660	-	81	65.228	ENSCAFG00020005312	-	90	64.471	Canis_lupus_dingo
ENSFDAG00000020660	-	95	69.691	ENSCHIG00000020582	-	78	70.168	Capra_hircus
ENSFDAG00000020660	-	96	81.429	ENSCPOG00000013960	-	74	81.429	Cavia_porcellus
ENSFDAG00000020660	-	96	81.059	ENSCLAG00000017424	-	73	81.059	Chinchilla_lanigera
ENSFDAG00000020660	-	97	69.215	ENSEASG00005001728	-	77	69.215	Equus_asinus_asinus
ENSFDAG00000020660	-	97	68.813	ENSECAG00000035665	-	80	68.813	Equus_caballus
ENSFDAG00000020660	-	97	69.215	ENSECAG00000037015	DDX53	80	69.215	Equus_caballus
ENSFDAG00000020660	-	96	74.797	ENSSTOG00000027719	-	66	74.797	Ictidomys_tridecemlineatus
ENSFDAG00000020660	-	97	70.423	ENSLAFG00000011531	-	79	70.423	Loxodonta_africana
ENSFDAG00000020660	-	99	69.141	ENSMPUG00000019441	-	84	69.141	Mustela_putorius_furo
ENSFDAG00000020660	-	96	70.672	ENSMLUG00000022321	-	77	70.672	Myotis_lucifugus
ENSFDAG00000020660	-	97	69.940	ENSMLUG00000022233	-	82	69.940	Myotis_lucifugus
ENSFDAG00000020660	-	98	69.455	ENSOCUG00000004437	-	81	70.039	Oryctolagus_cuniculus
ENSFDAG00000020660	-	96	70.183	ENSOGAG00000026282	-	78	70.183	Otolemur_garnettii
ENSFDAG00000020660	-	92	71.125	ENSOARG00000016525	-	77	71.125	Ovis_aries
ENSFDAG00000020660	-	96	71.197	ENSPPRG00000011327	-	76	71.197	Panthera_pardus
ENSFDAG00000020660	-	96	71.197	ENSPTIG00000001243	-	76	71.197	Panthera_tigris_altaica
ENSFDAG00000020660	-	97	69.153	ENSPVAG00000001484	-	79	69.153	Pteropus_vampyrus
ENSFDAG00000020660	-	97	71.774	ENSSSCG00000012169	-	79	71.774	Sus_scrofa
ENSFDAG00000020660	-	99	68.555	ENSTBEG00000014650	-	81	68.555	Tupaia_belangeri
ENSFDAG00000020660	-	96	60.569	ENSTTRG00000016514	-	78	60.569	Tursiops_truncatus
ENSFDAG00000020660	-	98	71.513	ENSUAMG00000000177	-	80	71.513	Ursus_americanus
ENSFDAG00000020660	-	81	68.825	ENSUMAG00000011448	-	92	68.825	Ursus_maritimus
ENSFDAG00000020660	-	97	69.355	ENSVPAG00000007860	-	79	69.355	Vicugna_pacos
ENSFDAG00000020660	-	99	70.588	ENSVVUG00000012789	-	81	70.703	Vulpes_vulpes