EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFDAG00000021009 (Gene tree)
Gene ID: 104849480
Gene Symbol: PRPF38B
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 9080 bases
Position: chrKN123939.1:1740161-1749240
Accession: 104849480
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000022671	PRP38	PF03371.15	1.3e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000009680	PRPF38B-201	1620	XM_010605933	ENSFDAP00000022671	539 (aa)	XP_010604235	-

Gene Model

Click here to download ENSFDAG00000021009's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000021009's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000021009	PRPF38B	100	96.337	ENSG00000134186	PRPF38B	100	97.241	Homo_sapiens
ENSFDAG00000021009	PRPF38B	100	96.154	ENSANAG00000028333	PRPF38B	100	96.154	Aotus_nancymaae
ENSFDAG00000021009	PRPF38B	100	89.617	ENSCGRG00001018841	Prpf38b	100	89.617	Cricetulus_griseus_chok1gshd
ENSFDAG00000021009	PRPF38B	84	92.291	ENSCGRG00000002972	Prpf38b	100	91.189	Cricetulus_griseus_crigri
ENSFDAG00000021009	PRPF38B	81	93.793	ENSDORG00000025236	-	97	93.587	Dipodomys_ordii
ENSFDAG00000021009	PRPF38B	100	91.590	ENSEEUG00000014328	PRPF38B	100	90.311	Erinaceus_europaeus
ENSFDAG00000021009	PRPF38B	100	96.337	ENSGGOG00000011288	PRPF38B	100	96.337	Gorilla_gorilla
ENSFDAG00000021009	PRPF38B	92	86.948	ENSMGAG00000006188	PRPF38B	100	87.751	Meleagris_gallopavo
ENSFDAG00000021009	PRPF38B	100	89.945	ENSMAUG00000019131	Prpf38b	100	89.031	Mesocricetus_auratus
ENSFDAG00000021009	PRPF38B	100	89.927	MGP_CAROLIEiJ_G0025542	Prpf38b	100	89.927	Mus_caroli
ENSFDAG00000021009	PRPF38B	100	90.676	ENSMUSG00000027881	Prpf38b	100	88.665	Mus_musculus
ENSFDAG00000021009	PRPF38B	100	90.494	MGP_PahariEiJ_G0026988	Prpf38b	100	90.494	Mus_pahari
ENSFDAG00000021009	PRPF38B	100	89.762	MGP_SPRETEiJ_G0026492	Prpf38b	100	89.762	Mus_spretus
ENSFDAG00000021009	PRPF38B	100	88.828	ENSNLEG00000030268	-	100	87.729	Nomascus_leucogenys
ENSFDAG00000021009	PRPF38B	100	95.247	ENSNLEG00000001645	-	100	95.247	Nomascus_leucogenys
ENSFDAG00000021009	PRPF38B	100	96.337	ENSPPAG00000001260	PRPF38B	100	96.337	Pan_paniscus
ENSFDAG00000021009	PRPF38B	100	95.628	ENSPPRG00000002116	PRPF38B	100	95.628	Panthera_pardus
ENSFDAG00000021009	PRPF38B	100	96.337	ENSPTRG00000001032	PRPF38B	100	96.337	Pan_troglodytes
ENSFDAG00000021009	PRPF38B	100	96.527	ENSPANG00000007560	PRPF38B	100	96.527	Papio_anubis
ENSFDAG00000021009	PRPF38B	59	91.212	ENSPCIG00000024841	PRPF38B	100	88.727	Phascolarctos_cinereus
ENSFDAG00000021009	PRPF38B	100	95.073	ENSPVAG00000011929	-	100	95.073	Pteropus_vampyrus
ENSFDAG00000021009	PRPF38B	100	94.364	ENSSARG00000012818	-	100	93.818	Sorex_araneus
ENSFDAG00000021009	PRPF38B	85	85.043	ENSTGUG00000004594	-	89	85.060	Taeniopygia_guttata
ENSFDAG00000021009	PRPF38B	100	95.628	ENSUAMG00000023817	PRPF38B	100	95.628	Ursus_americanus