EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000021016 (Gene tree)
Gene ID: 104864775
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 36216 bases
Position: chrKN122248.1:6117956-6154171
Accession: 104864775
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000022680	ResIII	PF04851.15	5.3e-11	1	1
ENSFDAP00000022681	ResIII	PF04851.15	6.3e-11	1	1
ENSFDAP00000022680	DEAD	PF00270.29	2.9e-06	1	1
ENSFDAP00000022681	DEAD	PF00270.29	3.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000009671	SMARCA5-202	3162	-	ENSFDAP00000022681	1053 (aa)	-	-
ENSFDAT00000009669	SMARCA5-201	6479	XM_010627984	ENSFDAP00000022680	993 (aa)	XP_010626286	-

Gene Model

Click here to download ENSFDAG00000021016's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000021016's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000021016	SMARCA5	56	43.409	ENSFDAG00000012431	CHD1L	64	43.761
ENSFDAG00000021016	SMARCA5	51	31.607	ENSFDAG00000020541	-	61	31.429
ENSFDAG00000021016	SMARCA5	96	85.124	ENSFDAG00000009818	SMARCA1	93	85.399
ENSFDAG00000021016	SMARCA5	50	47.410	ENSFDAG00000010042	HELLS	63	47.410

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000021016	SMARCA5	100	99.396	ENSG00000153147	SMARCA5	99	95.706	Homo_sapiens
ENSFDAG00000021016	SMARCA5	100	99.698	ENSAMEG00000009585	SMARCA5	99	96.073	Ailuropoda_melanoleuca
ENSFDAG00000021016	SMARCA5	97	96.715	ENSAPLG00000009206	SMARCA5	100	96.715	Anas_platyrhynchos
ENSFDAG00000021016	SMARCA5	100	96.579	ENSACAG00000003038	SMARCA5	97	95.626	Anolis_carolinensis
ENSFDAG00000021016	SMARCA5	100	99.396	ENSANAG00000019345	SMARCA5	99	99.396	Aotus_nancymaae
ENSFDAG00000021016	SMARCA5	100	99.597	ENSBTAG00000003399	SMARCA5	99	95.611	Bos_taurus
ENSFDAG00000021016	SMARCA5	100	99.496	ENSCJAG00000002735	SMARCA5	99	95.785	Callithrix_jacchus
ENSFDAG00000021016	SMARCA5	100	99.698	ENSCAFG00000007525	SMARCA5	99	95.977	Canis_familiaris
ENSFDAG00000021016	SMARCA5	98	99.589	ENSCAFG00020025641	SMARCA5	98	95.801	Canis_lupus_dingo
ENSFDAG00000021016	SMARCA5	100	97.784	ENSCHIG00000016375	-	97	97.012	Capra_hircus
ENSFDAG00000021016	SMARCA5	100	99.597	ENSCHIG00000013730	-	99	95.802	Capra_hircus
ENSFDAG00000021016	SMARCA5	100	99.496	ENSTSYG00000009954	SMARCA5	100	99.396	Carlito_syrichta
ENSFDAG00000021016	SMARCA5	97	99.483	ENSCAPG00000013747	SMARCA5	98	96.624	Cavia_aperea
ENSFDAG00000021016	SMARCA5	100	99.799	ENSCPOG00000002259	SMARCA5	95	99.400	Cavia_porcellus
ENSFDAG00000021016	SMARCA5	100	99.496	ENSCCAG00000027215	SMARCA5	99	99.496	Cebus_capucinus
ENSFDAG00000021016	SMARCA5	100	99.496	ENSCATG00000044917	SMARCA5	99	95.881	Cercocebus_atys
ENSFDAG00000021016	SMARCA5	100	99.799	ENSCLAG00000006153	SMARCA5	100	99.799	Chinchilla_lanigera
ENSFDAG00000021016	SMARCA5	98	99.484	ENSCSAG00000003448	SMARCA5	100	99.484	Chlorocebus_sabaeus
ENSFDAG00000021016	SMARCA5	91	100.000	ENSCHOG00000011724	SMARCA5	91	98.519	Choloepus_hoffmanni
ENSFDAG00000021016	SMARCA5	100	98.491	ENSCPBG00000027535	SMARCA5	96	98.491	Chrysemys_picta_bellii
ENSFDAG00000021016	SMARCA5	100	99.496	ENSCANG00000041629	SMARCA5	99	95.881	Colobus_angolensis_palliatus
ENSFDAG00000021016	SMARCA5	100	99.799	ENSCGRG00001012719	Smarca5	95	99.400	Cricetulus_griseus_chok1gshd
ENSFDAG00000021016	SMARCA5	100	99.799	ENSCGRG00000001417	Smarca5	99	99.698	Cricetulus_griseus_crigri
ENSFDAG00000021016	SMARCA5	100	96.777	ENSDNOG00000009158	SMARCA5	99	93.225	Dasypus_novemcinctus
ENSFDAG00000021016	SMARCA5	95	90.928	ENSDORG00000003466	Smarca5	97	90.928	Dipodomys_ordii
ENSFDAG00000021016	SMARCA5	97	85.744	ENSEBUG00000014773	SMARCA5	96	85.744	Eptatretus_burgeri
ENSFDAG00000021016	SMARCA5	100	99.698	ENSEASG00005001866	SMARCA5	98	99.636	Equus_asinus_asinus
ENSFDAG00000021016	SMARCA5	100	99.698	ENSECAG00000002676	SMARCA5	99	95.881	Equus_caballus
ENSFDAG00000021016	SMARCA5	100	95.166	ENSEEUG00000013176	SMARCA5	100	95.166	Erinaceus_europaeus
ENSFDAG00000021016	SMARCA5	97	89.072	ENSELUG00000014653	SMARCA5	99	89.072	Esox_lucius
ENSFDAG00000021016	SMARCA5	100	99.698	ENSFCAG00000004544	SMARCA5	99	95.977	Felis_catus
ENSFDAG00000021016	SMARCA5	98	97.320	ENSFALG00000004987	SMARCA5	100	97.320	Ficedula_albicollis
ENSFDAG00000021016	SMARCA5	98	89.150	ENSGMOG00000007519	SMARCA5	94	89.150	Gadus_morhua
ENSFDAG00000021016	SMARCA5	100	97.586	ENSGALG00000009913	SMARCA5	96	97.586	Gallus_gallus
ENSFDAG00000021016	SMARCA5	98	90.481	ENSGACG00000017238	SMARCA5	95	90.481	Gasterosteus_aculeatus
ENSFDAG00000021016	SMARCA5	100	98.390	ENSGAGG00000019882	SMARCA5	96	98.390	Gopherus_agassizii
ENSFDAG00000021016	SMARCA5	100	99.396	ENSGGOG00000012595	SMARCA5	100	99.296	Gorilla_gorilla
ENSFDAG00000021016	SMARCA5	100	99.899	ENSHGLG00000000816	-	95	99.400	Heterocephalus_glaber_female
ENSFDAG00000021016	SMARCA5	100	90.232	ENSHGLG00000000317	-	95	90.232	Heterocephalus_glaber_female
ENSFDAG00000021016	SMARCA5	100	99.899	ENSHGLG00100018421	-	100	99.899	Heterocephalus_glaber_male
ENSFDAG00000021016	SMARCA5	100	99.799	ENSSTOG00000010683	SMARCA5	99	95.977	Ictidomys_tridecemlineatus
ENSFDAG00000021016	SMARCA5	100	99.496	ENSJJAG00000014965	Smarca5	99	96.073	Jaculus_jaculus
ENSFDAG00000021016	SMARCA5	99	95.459	ENSLACG00000007091	SMARCA5	97	95.459	Latimeria_chalumnae
ENSFDAG00000021016	SMARCA5	99	92.183	ENSLOCG00000008966	SMARCA5	96	92.183	Lepisosteus_oculatus
ENSFDAG00000021016	SMARCA5	100	99.698	ENSLAFG00000007795	SMARCA5	99	95.802	Loxodonta_africana
ENSFDAG00000021016	SMARCA5	100	99.496	ENSMFAG00000043649	SMARCA5	99	95.881	Macaca_fascicularis
ENSFDAG00000021016	SMARCA5	100	99.496	ENSMMUG00000000829	SMARCA5	97	99.367	Macaca_mulatta
ENSFDAG00000021016	SMARCA5	100	99.496	ENSMNEG00000031916	SMARCA5	99	95.881	Macaca_nemestrina
ENSFDAG00000021016	SMARCA5	100	99.496	ENSMLEG00000042393	SMARCA5	99	95.881	Mandrillus_leucophaeus
ENSFDAG00000021016	SMARCA5	100	97.586	ENSMGAG00000003517	SMARCA5	99	97.586	Meleagris_gallopavo
ENSFDAG00000021016	SMARCA5	100	99.799	ENSMAUG00000015902	Smarca5	98	99.799	Mesocricetus_auratus
ENSFDAG00000021016	SMARCA5	100	99.496	ENSMICG00000003971	SMARCA5	100	97.900	Microcebus_murinus
ENSFDAG00000021016	SMARCA5	100	99.396	ENSMOCG00000016986	-	99	95.594	Microtus_ochrogaster
ENSFDAG00000021016	SMARCA5	100	99.094	ENSMODG00000000391	SMARCA5	95	99.094	Monodelphis_domestica
ENSFDAG00000021016	SMARCA5	100	99.496	ENSMUSG00000031715	Smarca5	99	95.606	Mus_musculus
ENSFDAG00000021016	SMARCA5	100	99.698	MGP_PahariEiJ_G0022862	Smarca5	99	95.798	Mus_pahari
ENSFDAG00000021016	SMARCA5	100	99.799	ENSMLUG00000000468	SMARCA5	99	96.073	Myotis_lucifugus
ENSFDAG00000021016	SMARCA5	100	99.698	ENSNGAG00000000441	Smarca5	99	95.881	Nannospalax_galili
ENSFDAG00000021016	SMARCA5	100	99.496	ENSNLEG00000005383	SMARCA5	99	95.881	Nomascus_leucogenys
ENSFDAG00000021016	SMARCA5	97	91.322	ENSMEUG00000001267	SMARCA5	100	91.322	Notamacropus_eugenii
ENSFDAG00000021016	SMARCA5	90	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSFDAG00000021016	SMARCA5	98	99.071	ENSOANG00000013921	SMARCA5	100	99.071	Ornithorhynchus_anatinus
ENSFDAG00000021016	SMARCA5	98	99.897	ENSOCUG00000013042	SMARCA5	100	99.897	Oryctolagus_cuniculus
ENSFDAG00000021016	SMARCA5	100	99.496	ENSOGAG00000009702	SMARCA5	99	95.602	Otolemur_garnettii
ENSFDAG00000021016	SMARCA5	99	99.395	ENSOARG00000010589	SMARCA5	99	95.606	Ovis_aries
ENSFDAG00000021016	SMARCA5	100	99.295	ENSPPAG00000028523	SMARCA5	100	99.195	Pan_paniscus
ENSFDAG00000021016	SMARCA5	100	93.756	ENSPPRG00000004925	SMARCA5	99	91.188	Panthera_pardus
ENSFDAG00000021016	SMARCA5	100	99.698	ENSPTIG00000020959	SMARCA5	97	98.806	Panthera_tigris_altaica
ENSFDAG00000021016	SMARCA5	100	99.396	ENSPTRG00000016472	SMARCA5	100	99.296	Pan_troglodytes
ENSFDAG00000021016	SMARCA5	100	99.496	ENSPANG00000001175	SMARCA5	99	95.881	Papio_anubis
ENSFDAG00000021016	SMARCA5	98	90.881	ENSPKIG00000015699	SMARCA5	98	89.716	Paramormyrops_kingsleyae
ENSFDAG00000021016	SMARCA5	98	91.340	ENSPKIG00000015885	SMARCA5	100	91.340	Paramormyrops_kingsleyae
ENSFDAG00000021016	SMARCA5	100	96.076	ENSPSIG00000004177	SMARCA5	99	96.076	Pelodiscus_sinensis
ENSFDAG00000021016	SMARCA5	97	89.815	ENSPMGG00000012316	SMARCA5	100	89.815	Periophthalmus_magnuspinnatus
ENSFDAG00000021016	SMARCA5	100	99.799	ENSPEMG00000008060	Smarca5	99	99.104	Peromyscus_maniculatus_bairdii
ENSFDAG00000021016	SMARCA5	99	70.582	ENSPMAG00000006011	SMARCA5	81	85.600	Petromyzon_marinus
ENSFDAG00000021016	SMARCA5	64	86.739	ENSPMAG00000008026	SMARCA5	99	86.739	Petromyzon_marinus
ENSFDAG00000021016	SMARCA5	100	99.094	ENSPCIG00000003926	SMARCA5	96	98.601	Phascolarctos_cinereus
ENSFDAG00000021016	SMARCA5	100	99.496	ENSPPYG00000015091	SMARCA5	99	95.785	Pongo_abelii
ENSFDAG00000021016	SMARCA5	84	95.500	ENSPCAG00000014230	SMARCA5	83	95.500	Procavia_capensis
ENSFDAG00000021016	SMARCA5	100	96.576	ENSPCOG00000026744	SMARCA5	99	95.976	Propithecus_coquereli
ENSFDAG00000021016	SMARCA5	100	99.597	ENSPVAG00000006482	SMARCA5	99	95.977	Pteropus_vampyrus
ENSFDAG00000021016	SMARCA5	99	90.010	ENSPNAG00000027824	SMARCA5	97	90.249	Pygocentrus_nattereri
ENSFDAG00000021016	SMARCA5	100	99.597	ENSRNOG00000018149	Smarca5	99	99.597	Rattus_norvegicus
ENSFDAG00000021016	SMARCA5	100	99.496	ENSRBIG00000044644	SMARCA5	99	95.789	Rhinopithecus_bieti
ENSFDAG00000021016	SMARCA5	100	99.496	ENSRROG00000029591	SMARCA5	99	99.496	Rhinopithecus_roxellana
ENSFDAG00000021016	SMARCA5	100	99.496	ENSSBOG00000036257	SMARCA5	99	95.611	Saimiri_boliviensis_boliviensis
ENSFDAG00000021016	SMARCA5	100	99.094	ENSSHAG00000008464	SMARCA5	100	99.094	Sarcophilus_harrisii
ENSFDAG00000021016	SMARCA5	99	90.679	ENSSFOG00015013252	SMARCA5	96	90.679	Scleropages_formosus
ENSFDAG00000021016	SMARCA5	99	96.566	ENSSPUG00000007604	SMARCA5	99	96.566	Sphenodon_punctatus
ENSFDAG00000021016	SMARCA5	100	99.698	ENSSSCG00000009047	SMARCA5	95	99.100	Sus_scrofa
ENSFDAG00000021016	SMARCA5	100	96.781	ENSTGUG00000002408	SMARCA5	99	96.781	Taeniopygia_guttata
ENSFDAG00000021016	SMARCA5	98	99.589	ENSUAMG00000023495	SMARCA5	98	95.801	Ursus_americanus
ENSFDAG00000021016	SMARCA5	100	99.698	ENSUMAG00000015324	SMARCA5	97	99.003	Ursus_maritimus
ENSFDAG00000021016	SMARCA5	100	99.396	ENSVPAG00000008982	SMARCA5	99	95.694	Vicugna_pacos
ENSFDAG00000021016	SMARCA5	100	99.698	ENSVVUG00000017473	SMARCA5	99	96.073	Vulpes_vulpes
ENSFDAG00000021016	SMARCA5	94	93.717	ENSXETG00000017566	smarca5	94	93.717	Xenopus_tropicalis