EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000021037 (Gene tree)
Gene ID: 104865785
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Plus strand
Length: 151071 bases
Position: chrKN120688.1:8783230-8934300
Accession: 104865785
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000022707	ResIII	PF04851.15	1.9e-06	1	1
ENSFDAP00000022707	BRK	PF07533.16	9.1e-31	1	2
ENSFDAP00000022707	BRK	PF07533.16	9.1e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000009612	CHD9-201	10236	XM_010629498	ENSFDAP00000022707	2897 (aa)	XP_010627800	UPI00054027EB

Gene Model

Click here to download ENSFDAG00000021037's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000021037's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000021037	CHD9	73	63.855	ENSFDAG00000013791	CHD6	75	65.308
ENSFDAG00000021037	CHD9	88	58.083	ENSFDAG00000000528	CHD7	93	54.290

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000021037	CHD9	100	94.898	ENSG00000177200	CHD9	100	100.000	Homo_sapiens
ENSFDAG00000021037	CHD9	85	70.904	ENSAPOG00000023034	chd9	66	75.119	Acanthochromis_polyacanthus
ENSFDAG00000021037	CHD9	100	94.490	ENSAMEG00000016232	CHD9	100	94.904	Ailuropoda_melanoleuca
ENSFDAG00000021037	CHD9	79	69.510	ENSACIG00000004097	chd9	73	60.817	Amphilophus_citrinellus
ENSFDAG00000021037	CHD9	84	70.375	ENSAOCG00000005487	chd9	67	75.179	Amphiprion_ocellaris
ENSFDAG00000021037	CHD9	86	70.825	ENSAPEG00000009859	chd9	99	61.131	Amphiprion_percula
ENSFDAG00000021037	CHD9	84	70.692	ENSATEG00000002748	chd9	99	62.040	Anabas_testudineus
ENSFDAG00000021037	CHD9	99	83.513	ENSAPLG00000002826	CHD9	74	85.453	Anas_platyrhynchos
ENSFDAG00000021037	CHD9	99	80.603	ENSACAG00000016150	CHD9	99	80.921	Anolis_carolinensis
ENSFDAG00000021037	CHD9	100	95.382	ENSANAG00000015630	CHD9	100	97.802	Aotus_nancymaae
ENSFDAG00000021037	CHD9	86	68.169	ENSAMXG00000005652	chd9	68	74.835	Astyanax_mexicanus
ENSFDAG00000021037	CHD9	100	93.662	ENSBTAG00000002287	CHD9	100	94.006	Bos_taurus
ENSFDAG00000021037	CHD9	100	94.416	ENSCJAG00000001573	CHD9	100	98.168	Callithrix_jacchus
ENSFDAG00000021037	CHD9	100	94.730	ENSCAFG00000009699	CHD9	100	95.074	Canis_familiaris
ENSFDAG00000021037	CHD9	100	94.730	ENSCAFG00020002879	CHD9	100	99.267	Canis_lupus_dingo
ENSFDAG00000021037	CHD9	100	94.623	ENSTSYG00000007693	CHD9	100	98.901	Carlito_syrichta
ENSFDAG00000021037	CHD9	81	81.780	ENSCAPG00000011604	CHD9	81	80.940	Cavia_aperea
ENSFDAG00000021037	CHD9	100	93.481	ENSCPOG00000036544	CHD9	100	93.481	Cavia_porcellus
ENSFDAG00000021037	CHD9	100	94.590	ENSCCAG00000036178	CHD9	100	97.436	Cebus_capucinus
ENSFDAG00000021037	CHD9	100	93.664	ENSCATG00000036753	CHD9	100	98.168	Cercocebus_atys
ENSFDAG00000021037	CHD9	100	97.275	ENSCLAG00000007137	CHD9	100	97.275	Chinchilla_lanigera
ENSFDAG00000021037	CHD9	100	94.458	ENSCSAG00000005311	CHD9	100	94.699	Chlorocebus_sabaeus
ENSFDAG00000021037	CHD9	74	98.077	ENSCHOG00000003935	CHD9	76	98.077	Choloepus_hoffmanni
ENSFDAG00000021037	CHD9	99	84.802	ENSCPBG00000012459	CHD9	98	91.618	Chrysemys_picta_bellii
ENSFDAG00000021037	CHD9	100	94.353	ENSCANG00000030349	CHD9	100	98.168	Colobus_angolensis_palliatus
ENSFDAG00000021037	CHD9	99	92.110	ENSCGRG00001016150	Chd9	99	91.594	Cricetulus_griseus_chok1gshd
ENSFDAG00000021037	CHD9	99	92.110	ENSCGRG00000012850	Chd9	99	95.723	Cricetulus_griseus_crigri
ENSFDAG00000021037	CHD9	79	68.681	ENSCSEG00000009209	chd9	67	72.447	Cynoglossus_semilaevis
ENSFDAG00000021037	CHD9	80	70.198	ENSCVAG00000016195	chd9	73	62.360	Cyprinodon_variegatus
ENSFDAG00000021037	CHD9	55	74.558	ENSDARG00000074498	chd9	68	73.981	Danio_rerio
ENSFDAG00000021037	CHD9	81	94.048	ENSDNOG00000006045	CHD9	100	94.515	Dasypus_novemcinctus
ENSFDAG00000021037	CHD9	69	93.846	ENSDORG00000008523	-	100	93.995	Dipodomys_ordii
ENSFDAG00000021037	CHD9	94	97.368	ENSETEG00000009565	CHD9	94	97.368	Echinops_telfairi
ENSFDAG00000021037	CHD9	99	94.450	ENSEASG00005014832	CHD9	100	94.867	Equus_asinus_asinus
ENSFDAG00000021037	CHD9	100	94.284	ENSECAG00000011505	CHD9	100	94.697	Equus_caballus
ENSFDAG00000021037	CHD9	83	97.790	ENSEEUG00000014515	CHD9	86	97.790	Erinaceus_europaeus
ENSFDAG00000021037	CHD9	78	72.154	ENSELUG00000006031	chd9	96	68.130	Esox_lucius
ENSFDAG00000021037	CHD9	100	94.383	ENSFCAG00000022534	CHD9	100	98.901	Felis_catus
ENSFDAG00000021037	CHD9	83	86.953	ENSFALG00000013276	CHD9	99	86.964	Ficedula_albicollis
ENSFDAG00000021037	CHD9	85	69.547	ENSFHEG00000006068	chd9	99	59.269	Fundulus_heteroclitus
ENSFDAG00000021037	CHD9	67	76.678	ENSGMOG00000006040	chd9	83	76.662	Gadus_morhua
ENSFDAG00000021037	CHD9	96	84.757	ENSGALG00000039178	CHD9	98	84.793	Gallus_gallus
ENSFDAG00000021037	CHD9	85	69.653	ENSGAFG00000010014	chd9	99	59.610	Gambusia_affinis
ENSFDAG00000021037	CHD9	79	67.738	ENSGACG00000016694	chd9	96	74.135	Gasterosteus_aculeatus
ENSFDAG00000021037	CHD9	100	94.144	ENSGGOG00000014816	CHD9	100	98.535	Gorilla_gorilla
ENSFDAG00000021037	CHD9	84	70.851	ENSHBUG00000023322	chd9	96	69.930	Haplochromis_burtoni
ENSFDAG00000021037	CHD9	100	97.585	ENSHGLG00000014938	CHD9	99	98.613	Heterocephalus_glaber_female
ENSFDAG00000021037	CHD9	90	65.797	ENSHCOG00000000937	chd9	69	73.211	Hippocampus_comes
ENSFDAG00000021037	CHD9	80	70.114	ENSIPUG00000016448	chd9	98	73.723	Ictalurus_punctatus
ENSFDAG00000021037	CHD9	100	95.412	ENSSTOG00000022273	CHD9	99	96.879	Ictidomys_tridecemlineatus
ENSFDAG00000021037	CHD9	69	92.445	ENSJJAG00000015741	-	100	93.042	Jaculus_jaculus
ENSFDAG00000021037	CHD9	84	69.828	ENSKMAG00000016784	chd9	96	61.159	Kryptolebias_marmoratus
ENSFDAG00000021037	CHD9	89	63.386	ENSLBEG00000012077	chd9	93	63.883	Labrus_bergylta
ENSFDAG00000021037	CHD9	99	71.938	ENSLACG00000005557	CHD9	73	71.965	Latimeria_chalumnae
ENSFDAG00000021037	CHD9	87	72.524	ENSLOCG00000007225	chd9	99	73.173	Lepisosteus_oculatus
ENSFDAG00000021037	CHD9	100	93.733	ENSLAFG00000015374	CHD9	100	94.180	Loxodonta_africana
ENSFDAG00000021037	CHD9	100	94.318	ENSMFAG00000041354	CHD9	100	98.168	Macaca_fascicularis
ENSFDAG00000021037	CHD9	100	94.284	ENSMMUG00000016310	CHD9	100	98.168	Macaca_mulatta
ENSFDAG00000021037	CHD9	100	94.217	ENSMNEG00000031494	CHD9	100	95.145	Macaca_nemestrina
ENSFDAG00000021037	CHD9	100	94.284	ENSMLEG00000043219	CHD9	100	98.168	Mandrillus_leucophaeus
ENSFDAG00000021037	CHD9	79	70.244	ENSMAMG00000003909	chd9	99	60.033	Mastacembelus_armatus
ENSFDAG00000021037	CHD9	84	70.828	ENSMZEG00005006581	chd9	67	75.687	Maylandia_zebra
ENSFDAG00000021037	CHD9	95	79.256	ENSMGAG00000004642	CHD9	72	80.546	Meleagris_gallopavo
ENSFDAG00000021037	CHD9	100	94.312	ENSMICG00000016679	CHD9	100	98.168	Microcebus_murinus
ENSFDAG00000021037	CHD9	73	81.268	ENSMODG00000013142	-	99	92.235	Monodelphis_domestica
ENSFDAG00000021037	CHD9	84	70.229	ENSMALG00000013306	chd9	73	62.271	Monopterus_albus
ENSFDAG00000021037	CHD9	99	90.906	MGP_CAROLIEiJ_G0031364	Chd9	99	90.427	Mus_caroli
ENSFDAG00000021037	CHD9	99	90.653	ENSMUSG00000056608	Chd9	99	94.451	Mus_musculus
ENSFDAG00000021037	CHD9	99	88.939	MGP_PahariEiJ_G0022964	Chd9	99	88.462	Mus_pahari
ENSFDAG00000021037	CHD9	99	90.688	MGP_SPRETEiJ_G0032483	Chd9	99	90.243	Mus_spretus
ENSFDAG00000021037	CHD9	100	94.004	ENSMPUG00000003285	CHD9	100	94.383	Mustela_putorius_furo
ENSFDAG00000021037	CHD9	100	93.795	ENSMLUG00000004456	CHD9	100	93.933	Myotis_lucifugus
ENSFDAG00000021037	CHD9	85	70.330	ENSNBRG00000009423	chd9	67	75.552	Neolamprologus_brichardi
ENSFDAG00000021037	CHD9	90	94.713	ENSNLEG00000001026	CHD9	100	95.172	Nomascus_leucogenys
ENSFDAG00000021037	CHD9	76	96.078	ENSMEUG00000008222	-	84	96.078	Notamacropus_eugenii
ENSFDAG00000021037	CHD9	85	96.857	ENSOPRG00000011168	CHD9	85	96.857	Ochotona_princeps
ENSFDAG00000021037	CHD9	100	96.484	ENSODEG00000004466	CHD9	100	96.484	Octodon_degus
ENSFDAG00000021037	CHD9	80	71.146	ENSONIG00000002816	chd9	87	62.517	Oreochromis_niloticus
ENSFDAG00000021037	CHD9	100	86.619	ENSOANG00000013401	CHD9	100	86.584	Ornithorhynchus_anatinus
ENSFDAG00000021037	CHD9	83	96.358	ENSOCUG00000001016	CHD9	99	96.358	Oryctolagus_cuniculus
ENSFDAG00000021037	CHD9	85	70.017	ENSORLG00000013810	chd9	98	67.193	Oryzias_latipes
ENSFDAG00000021037	CHD9	85	69.231	ENSORLG00015019126	chd9	97	60.536	Oryzias_latipes_hsok
ENSFDAG00000021037	CHD9	100	94.112	ENSOGAG00000002110	CHD9	100	94.626	Otolemur_garnettii
ENSFDAG00000021037	CHD9	100	93.393	ENSOARG00000017664	CHD9	100	93.806	Ovis_aries
ENSFDAG00000021037	CHD9	83	93.651	ENSPPAG00000039388	-	100	94.232	Pan_paniscus
ENSFDAG00000021037	CHD9	100	94.280	ENSPPRG00000004801	CHD9	100	98.535	Panthera_pardus
ENSFDAG00000021037	CHD9	100	93.315	ENSPTIG00000021854	CHD9	100	93.694	Panthera_tigris_altaica
ENSFDAG00000021037	CHD9	100	94.452	ENSPTRG00000008113	CHD9	100	98.535	Pan_troglodytes
ENSFDAG00000021037	CHD9	100	94.249	ENSPANG00000019307	CHD9	100	98.168	Papio_anubis
ENSFDAG00000021037	CHD9	97	62.783	ENSPKIG00000021876	chd9	68	76.643	Paramormyrops_kingsleyae
ENSFDAG00000021037	CHD9	98	59.178	ENSPKIG00000025401	-	71	63.106	Paramormyrops_kingsleyae
ENSFDAG00000021037	CHD9	64	84.757	ENSPSIG00000008099	CHD9	99	84.703	Pelodiscus_sinensis
ENSFDAG00000021037	CHD9	59	56.716	ENSPMAG00000006035	-	72	67.849	Petromyzon_marinus
ENSFDAG00000021037	CHD9	89	87.000	ENSPCIG00000017215	CHD9	97	89.613	Phascolarctos_cinereus
ENSFDAG00000021037	CHD9	85	69.602	ENSPFOG00000015839	chd9	99	59.609	Poecilia_formosa
ENSFDAG00000021037	CHD9	85	69.862	ENSPLAG00000011118	chd9	99	59.726	Poecilia_latipinna
ENSFDAG00000021037	CHD9	85	69.885	ENSPMEG00000015106	chd9	99	59.729	Poecilia_mexicana
ENSFDAG00000021037	CHD9	85	70.566	ENSPREG00000006473	chd9	98	67.830	Poecilia_reticulata
ENSFDAG00000021037	CHD9	100	94.314	ENSPPYG00000007348	CHD9	100	94.762	Pongo_abelii
ENSFDAG00000021037	CHD9	77	95.680	ENSPCAG00000007564	CHD9	86	95.680	Procavia_capensis
ENSFDAG00000021037	CHD9	100	93.554	ENSPCOG00000028433	CHD9	100	99.267	Propithecus_coquereli
ENSFDAG00000021037	CHD9	97	92.300	ENSPVAG00000015617	CHD9	98	92.460	Pteropus_vampyrus
ENSFDAG00000021037	CHD9	85	70.539	ENSPNYG00000010947	chd9	66	75.552	Pundamilia_nyererei
ENSFDAG00000021037	CHD9	91	66.100	ENSPNAG00000024141	chd9	68	74.434	Pygocentrus_nattereri
ENSFDAG00000021037	CHD9	90	87.950	ENSRNOG00000049302	Chd9	100	90.159	Rattus_norvegicus
ENSFDAG00000021037	CHD9	83	94.787	ENSRBIG00000035553	CHD9	100	98.168	Rhinopithecus_bieti
ENSFDAG00000021037	CHD9	82	94.739	ENSRROG00000033278	CHD9	100	98.168	Rhinopithecus_roxellana
ENSFDAG00000021037	CHD9	100	94.797	ENSSBOG00000030240	CHD9	100	97.436	Saimiri_boliviensis_boliviensis
ENSFDAG00000021037	CHD9	99	87.431	ENSSHAG00000002719	CHD9	100	87.242	Sarcophilus_harrisii
ENSFDAG00000021037	CHD9	88	66.333	ENSSFOG00015001327	chd9	67	75.932	Scleropages_formosus
ENSFDAG00000021037	CHD9	98	62.424	ENSSFOG00015020209	chd9	68	76.895	Scleropages_formosus
ENSFDAG00000021037	CHD9	84	69.170	ENSSMAG00000008953	chd9	99	61.962	Scophthalmus_maximus
ENSFDAG00000021037	CHD9	84	70.397	ENSSDUG00000006139	chd9	98	67.950	Seriola_dumerili
ENSFDAG00000021037	CHD9	84	71.000	ENSSLDG00000017818	chd9	98	68.584	Seriola_lalandi_dorsalis
ENSFDAG00000021037	CHD9	71	97.515	ENSSARG00000010632	CHD9	71	97.515	Sorex_araneus
ENSFDAG00000021037	CHD9	84	70.690	ENSSPAG00000021649	chd9	67	74.408	Stegastes_partitus
ENSFDAG00000021037	CHD9	99	91.964	ENSSSCG00000033591	CHD9	75	95.131	Sus_scrofa
ENSFDAG00000021037	CHD9	90	84.895	ENSTGUG00000007476	CHD9	100	84.933	Taeniopygia_guttata
ENSFDAG00000021037	CHD9	60	76.056	ENSTRUG00000009125	chd9	73	62.659	Takifugu_rubripes
ENSFDAG00000021037	CHD9	57	81.951	ENSTNIG00000003825	chd9	85	81.951	Tetraodon_nigroviridis
ENSFDAG00000021037	CHD9	66	94.595	ENSTBEG00000016052	-	81	94.595	Tupaia_belangeri
ENSFDAG00000021037	CHD9	90	93.716	ENSTTRG00000012674	CHD9	90	94.176	Tursiops_truncatus
ENSFDAG00000021037	CHD9	64	94.215	ENSUAMG00000022706	CHD9	100	99.267	Ursus_americanus
ENSFDAG00000021037	CHD9	90	92.440	ENSUMAG00000004043	CHD9	99	98.188	Ursus_maritimus
ENSFDAG00000021037	CHD9	97	94.665	ENSVPAG00000001374	CHD9	97	94.665	Vicugna_pacos
ENSFDAG00000021037	CHD9	100	94.798	ENSVVUG00000019435	CHD9	100	95.143	Vulpes_vulpes
ENSFDAG00000021037	CHD9	99	72.756	ENSXETG00000000349	chd9	96	76.202	Xenopus_tropicalis
ENSFDAG00000021037	CHD9	80	70.633	ENSXCOG00000012997	chd9	67	75.030	Xiphophorus_couchianus
ENSFDAG00000021037	CHD9	85	70.175	ENSXMAG00000016192	chd9	99	60.202	Xiphophorus_maculatus