EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000021056 (Gene tree)
Gene ID: 104863435
Gene Symbol: LSM10
Alias: MGC15749
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 3661 bases
Position: chrKN122157.1:694814-698474
Accession: 104863435
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000022730	LSM	PF01423.22	1.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000009588	LSM10-201	1115	XM_010625821	ENSFDAP00000022730	123 (aa)	XP_010624123	A0A091EB32

Gene Model

Click here to download ENSFDAG00000021056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000021056's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000021056	LSM10	55	30.000	ENSFDAG00000000390	LSM2	74	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000021056	LSM10	100	89.431	ENSG00000181817	LSM10	100	89.431	Homo_sapiens
ENSFDAG00000021056	LSM10	100	92.683	ENSAMEG00000019854	LSM10	100	92.683	Ailuropoda_melanoleuca
ENSFDAG00000021056	LSM10	94	67.241	ENSACIG00000015420	oscp1a	77	67.241	Amphilophus_citrinellus
ENSFDAG00000021056	LSM10	90	66.667	ENSAOCG00000015607	LSM10	86	66.667	Amphiprion_ocellaris
ENSFDAG00000021056	LSM10	96	69.492	ENSAOCG00000014654	-	98	69.492	Amphiprion_ocellaris
ENSFDAG00000021056	LSM10	96	69.492	ENSAOCG00000015618	LSM10	98	69.492	Amphiprion_ocellaris
ENSFDAG00000021056	LSM10	96	69.492	ENSAPEG00000021845	-	98	69.492	Amphiprion_percula
ENSFDAG00000021056	LSM10	90	66.667	ENSAPEG00000021851	LSM10	86	66.667	Amphiprion_percula
ENSFDAG00000021056	LSM10	94	62.931	ENSATEG00000006310	oscp1a	86	62.931	Anabas_testudineus
ENSFDAG00000021056	LSM10	100	67.480	ENSACAG00000001231	LSM10	100	67.480	Anolis_carolinensis
ENSFDAG00000021056	LSM10	98	89.167	ENSANAG00000031489	-	98	89.167	Aotus_nancymaae
ENSFDAG00000021056	LSM10	100	89.431	ENSANAG00000018759	-	100	89.431	Aotus_nancymaae
ENSFDAG00000021056	LSM10	96	66.949	ENSACLG00000004728	oscp1a	96	66.949	Astatotilapia_calliptera
ENSFDAG00000021056	LSM10	96	67.797	ENSAMXG00000025301	oscp1a	98	67.797	Astyanax_mexicanus
ENSFDAG00000021056	LSM10	98	92.500	ENSBTAG00000024096	LSM10	98	92.500	Bos_taurus
ENSFDAG00000021056	LSM10	100	88.618	ENSCJAG00000044880	LSM10	100	88.618	Callithrix_jacchus
ENSFDAG00000021056	LSM10	100	92.683	ENSCAFG00000003382	LSM10	100	92.683	Canis_familiaris
ENSFDAG00000021056	LSM10	100	92.683	ENSCAFG00020008920	LSM10	100	92.683	Canis_lupus_dingo
ENSFDAG00000021056	LSM10	98	92.500	ENSCHIG00000009398	LSM10	98	92.500	Capra_hircus
ENSFDAG00000021056	LSM10	100	95.122	ENSCAPG00000012567	LSM10	100	95.122	Cavia_aperea
ENSFDAG00000021056	LSM10	100	95.122	ENSCPOG00000039302	LSM10	100	95.122	Cavia_porcellus
ENSFDAG00000021056	LSM10	100	89.431	ENSCCAG00000018913	-	100	89.431	Cebus_capucinus
ENSFDAG00000021056	LSM10	98	89.167	ENSCCAG00000008378	-	98	89.167	Cebus_capucinus
ENSFDAG00000021056	LSM10	100	89.431	ENSCATG00000006589	LSM10	100	89.431	Cercocebus_atys
ENSFDAG00000021056	LSM10	100	95.935	ENSCLAG00000008633	LSM10	100	95.935	Chinchilla_lanigera
ENSFDAG00000021056	LSM10	100	89.431	ENSCSAG00000000134	LSM10	100	89.431	Chlorocebus_sabaeus
ENSFDAG00000021056	LSM10	100	88.800	ENSCHOG00000008615	LSM10	100	88.800	Choloepus_hoffmanni
ENSFDAG00000021056	LSM10	83	31.373	ENSCSAVG00000001896	-	87	31.373	Ciona_savignyi
ENSFDAG00000021056	LSM10	100	89.431	ENSCANG00000019928	LSM10	100	89.431	Colobus_angolensis_palliatus
ENSFDAG00000021056	LSM10	93	79.487	ENSCGRG00001022673	-	94	79.487	Cricetulus_griseus_chok1gshd
ENSFDAG00000021056	LSM10	98	89.256	ENSCGRG00001004317	-	99	89.256	Cricetulus_griseus_chok1gshd
ENSFDAG00000021056	LSM10	98	89.256	ENSCGRG00000014935	-	99	89.256	Cricetulus_griseus_crigri
ENSFDAG00000021056	LSM10	93	79.487	ENSCGRG00000015514	-	94	79.487	Cricetulus_griseus_crigri
ENSFDAG00000021056	LSM10	96	65.254	ENSCSEG00000010374	oscp1a	79	65.254	Cynoglossus_semilaevis
ENSFDAG00000021056	LSM10	97	64.706	ENSCVAG00000001536	oscp1a	90	64.706	Cyprinodon_variegatus
ENSFDAG00000021056	LSM10	69	71.765	ENSDARG00000109563	CABZ01074453.1	99	71.765	Danio_rerio
ENSFDAG00000021056	LSM10	98	71.901	ENSDARG00000101222	oscp1a	100	71.901	Danio_rerio
ENSFDAG00000021056	LSM10	99	90.164	ENSDNOG00000036662	LSM10	99	90.164	Dasypus_novemcinctus
ENSFDAG00000021056	LSM10	100	89.431	ENSDORG00000007579	Lsm10	100	89.431	Dipodomys_ordii
ENSFDAG00000021056	LSM10	100	88.618	ENSETEG00000005703	LSM10	100	88.618	Echinops_telfairi
ENSFDAG00000021056	LSM10	95	52.991	ENSEBUG00000001312	oscp1a	96	52.991	Eptatretus_burgeri
ENSFDAG00000021056	LSM10	100	92.683	ENSEASG00005012194	LSM10	100	92.683	Equus_asinus_asinus
ENSFDAG00000021056	LSM10	100	91.870	ENSECAG00000005071	LSM10	100	91.870	Equus_caballus
ENSFDAG00000021056	LSM10	100	89.431	ENSEEUG00000012032	LSM10	100	89.431	Erinaceus_europaeus
ENSFDAG00000021056	LSM10	98	69.421	ENSELUG00000007452	oscp1a	99	69.421	Esox_lucius
ENSFDAG00000021056	LSM10	100	69.919	ENSFALG00000000851	LSM10	100	69.919	Ficedula_albicollis
ENSFDAG00000021056	LSM10	89	69.091	ENSFHEG00000001058	oscp1a	95	69.091	Fundulus_heteroclitus
ENSFDAG00000021056	LSM10	88	66.055	ENSGMOG00000019832	oscp1a	92	66.055	Gadus_morhua
ENSFDAG00000021056	LSM10	100	73.984	ENSGALG00000002127	LSM10	100	73.984	Gallus_gallus
ENSFDAG00000021056	LSM10	91	60.870	ENSGAFG00000016445	oscp1a	93	60.870	Gambusia_affinis
ENSFDAG00000021056	LSM10	96	65.254	ENSGACG00000002329	oscp1a	97	65.254	Gasterosteus_aculeatus
ENSFDAG00000021056	LSM10	100	73.171	ENSGAGG00000024848	LSM10	100	73.171	Gopherus_agassizii
ENSFDAG00000021056	LSM10	100	89.431	ENSGGOG00000003556	LSM10	100	89.431	Gorilla_gorilla
ENSFDAG00000021056	LSM10	96	67.797	ENSHBUG00000001722	oscp1a	96	67.797	Haplochromis_burtoni
ENSFDAG00000021056	LSM10	100	93.496	ENSHGLG00000011625	LSM10	100	93.496	Heterocephalus_glaber_female
ENSFDAG00000021056	LSM10	100	93.496	ENSHGLG00100001769	LSM10	100	93.496	Heterocephalus_glaber_male
ENSFDAG00000021056	LSM10	86	68.868	ENSIPUG00000005808	oscp1a	92	68.868	Ictalurus_punctatus
ENSFDAG00000021056	LSM10	100	92.683	ENSSTOG00000000606	LSM10	100	92.683	Ictidomys_tridecemlineatus
ENSFDAG00000021056	LSM10	96	65.254	ENSKMAG00000012143	oscp1a	98	65.254	Kryptolebias_marmoratus
ENSFDAG00000021056	LSM10	98	65.000	ENSLBEG00000017764	oscp1a	98	65.000	Labrus_bergylta
ENSFDAG00000021056	LSM10	100	73.171	ENSLACG00000015904	LSM10	95	73.171	Latimeria_chalumnae
ENSFDAG00000021056	LSM10	98	70.833	ENSLOCG00000018277	oscp1a	98	70.833	Lepisosteus_oculatus
ENSFDAG00000021056	LSM10	100	91.057	ENSLAFG00000009600	LSM10	100	91.057	Loxodonta_africana
ENSFDAG00000021056	LSM10	100	89.431	ENSMFAG00000009115	LSM10	100	89.431	Macaca_fascicularis
ENSFDAG00000021056	LSM10	100	89.431	ENSMMUG00000017338	LSM10	100	89.431	Macaca_mulatta
ENSFDAG00000021056	LSM10	100	89.431	ENSMNEG00000020023	LSM10	100	89.431	Macaca_nemestrina
ENSFDAG00000021056	LSM10	100	89.431	ENSMLEG00000025150	LSM10	100	89.431	Mandrillus_leucophaeus
ENSFDAG00000021056	LSM10	98	66.667	ENSMAMG00000004427	oscp1a	98	66.667	Mastacembelus_armatus
ENSFDAG00000021056	LSM10	96	66.949	ENSMZEG00005026307	oscp1a	96	66.949	Maylandia_zebra
ENSFDAG00000021056	LSM10	100	73.984	ENSMGAG00000015707	LSM10	100	73.984	Meleagris_gallopavo
ENSFDAG00000021056	LSM10	98	86.777	ENSMAUG00000016624	Lsm10	99	86.777	Mesocricetus_auratus
ENSFDAG00000021056	LSM10	98	87.603	ENSMOCG00000021943	Lsm10	99	87.603	Microtus_ochrogaster
ENSFDAG00000021056	LSM10	98	64.167	ENSMMOG00000013597	oscp1a	90	64.167	Mola_mola
ENSFDAG00000021056	LSM10	100	82.927	ENSMODG00000023328	LSM10	100	82.927	Monodelphis_domestica
ENSFDAG00000021056	LSM10	98	89.256	MGP_CAROLIEiJ_G0026467	Lsm10	100	91.398	Mus_caroli
ENSFDAG00000021056	LSM10	98	88.430	ENSMUSG00000050188	Lsm10	100	90.323	Mus_musculus
ENSFDAG00000021056	LSM10	98	88.430	MGP_PahariEiJ_G0028798	Lsm10	100	90.323	Mus_pahari
ENSFDAG00000021056	LSM10	98	88.430	MGP_SPRETEiJ_G0027446	Lsm10	100	90.323	Mus_spretus
ENSFDAG00000021056	LSM10	100	92.683	ENSMPUG00000018593	LSM10	100	92.683	Mustela_putorius_furo
ENSFDAG00000021056	LSM10	100	90.244	ENSMLUG00000023895	LSM10	100	90.244	Myotis_lucifugus
ENSFDAG00000021056	LSM10	100	90.244	ENSNGAG00000015011	Lsm10	100	90.244	Nannospalax_galili
ENSFDAG00000021056	LSM10	96	68.644	ENSNBRG00000014306	oscp1a	96	68.644	Neolamprologus_brichardi
ENSFDAG00000021056	LSM10	100	90.244	ENSNLEG00000033754	LSM10	100	90.244	Nomascus_leucogenys
ENSFDAG00000021056	LSM10	100	83.740	ENSMEUG00000006313	LSM10	100	83.740	Notamacropus_eugenii
ENSFDAG00000021056	LSM10	100	88.618	ENSOPRG00000001699	LSM10	100	88.618	Ochotona_princeps
ENSFDAG00000021056	LSM10	100	95.935	ENSODEG00000019161	LSM10	100	95.935	Octodon_degus
ENSFDAG00000021056	LSM10	96	68.644	ENSONIG00000020904	oscp1a	97	68.644	Oreochromis_niloticus
ENSFDAG00000021056	LSM10	100	77.236	ENSOANG00000002066	LSM10	100	77.236	Ornithorhynchus_anatinus
ENSFDAG00000021056	LSM10	100	87.805	ENSOCUG00000005333	LSM10	100	87.805	Oryctolagus_cuniculus
ENSFDAG00000021056	LSM10	97	66.387	ENSORLG00000009504	oscp1a	98	66.387	Oryzias_latipes
ENSFDAG00000021056	LSM10	97	66.387	ENSORLG00020016201	oscp1a	98	66.387	Oryzias_latipes_hni
ENSFDAG00000021056	LSM10	97	67.227	ENSORLG00015007794	oscp1a	98	67.227	Oryzias_latipes_hsok
ENSFDAG00000021056	LSM10	100	92.683	ENSOGAG00000002653	LSM10	100	92.683	Otolemur_garnettii
ENSFDAG00000021056	LSM10	98	92.500	ENSOARG00000009596	LSM10	98	92.500	Ovis_aries
ENSFDAG00000021056	LSM10	100	89.431	ENSPPAG00000023465	LSM10	100	89.431	Pan_paniscus
ENSFDAG00000021056	LSM10	100	91.870	ENSPPRG00000014619	LSM10	100	91.870	Panthera_pardus
ENSFDAG00000021056	LSM10	100	91.870	ENSPTIG00000004613	LSM10	100	91.870	Panthera_tigris_altaica
ENSFDAG00000021056	LSM10	100	89.431	ENSPTRG00000000539	LSM10	100	89.431	Pan_troglodytes
ENSFDAG00000021056	LSM10	100	89.431	ENSPANG00000023172	LSM10	100	89.431	Papio_anubis
ENSFDAG00000021056	LSM10	98	66.667	ENSPKIG00000003728	oscp1a	97	66.667	Paramormyrops_kingsleyae
ENSFDAG00000021056	LSM10	100	73.171	ENSPSIG00000000590	LSM10	100	73.171	Pelodiscus_sinensis
ENSFDAG00000021056	LSM10	62	64.474	ENSPMGG00000015718	oscp1a	99	64.474	Periophthalmus_magnuspinnatus
ENSFDAG00000021056	LSM10	91	78.571	ENSPCIG00000014865	LSM10	82	78.571	Phascolarctos_cinereus
ENSFDAG00000021056	LSM10	91	66.964	ENSPFOG00000020490	oscp1a	95	66.964	Poecilia_formosa
ENSFDAG00000021056	LSM10	91	66.964	ENSPLAG00000016537	oscp1a	85	66.964	Poecilia_latipinna
ENSFDAG00000021056	LSM10	88	67.593	ENSPMEG00000000174	oscp1a	94	67.593	Poecilia_mexicana
ENSFDAG00000021056	LSM10	91	66.071	ENSPREG00000009899	oscp1a	85	66.071	Poecilia_reticulata
ENSFDAG00000021056	LSM10	100	89.431	ENSPPYG00000001539	LSM10	100	89.431	Pongo_abelii
ENSFDAG00000021056	LSM10	96	91.525	ENSPCAG00000002520	LSM10	97	91.525	Procavia_capensis
ENSFDAG00000021056	LSM10	100	93.496	ENSPVAG00000008644	LSM10	100	93.496	Pteropus_vampyrus
ENSFDAG00000021056	LSM10	96	67.797	ENSPNYG00000003138	oscp1a	96	67.797	Pundamilia_nyererei
ENSFDAG00000021056	LSM10	95	67.521	ENSPNAG00000028829	oscp1a	97	67.521	Pygocentrus_nattereri
ENSFDAG00000021056	LSM10	98	89.256	ENSRNOG00000025716	Lsm10	99	89.256	Rattus_norvegicus
ENSFDAG00000021056	LSM10	100	89.431	ENSRBIG00000001561	LSM10	100	89.431	Rhinopithecus_bieti
ENSFDAG00000021056	LSM10	100	89.431	ENSRROG00000011414	LSM10	100	89.431	Rhinopithecus_roxellana
ENSFDAG00000021056	LSM10	100	89.431	ENSSBOG00000036413	-	100	89.431	Saimiri_boliviensis_boliviensis
ENSFDAG00000021056	LSM10	100	82.927	ENSSHAG00000018056	LSM10	100	82.927	Sarcophilus_harrisii
ENSFDAG00000021056	LSM10	98	66.942	ENSSFOG00015019954	lsm10	99	66.942	Scleropages_formosus
ENSFDAG00000021056	LSM10	93	66.957	ENSSMAG00000001297	oscp1a	98	66.957	Scophthalmus_maximus
ENSFDAG00000021056	LSM10	98	64.463	ENSSDUG00000007090	oscp1a	98	64.463	Seriola_dumerili
ENSFDAG00000021056	LSM10	94	65.517	ENSSLDG00000000800	oscp1a	96	65.517	Seriola_lalandi_dorsalis
ENSFDAG00000021056	LSM10	100	88.800	ENSSARG00000004211	LSM10	100	90.400	Sorex_araneus
ENSFDAG00000021056	LSM10	94	67.241	ENSSPAG00000009229	oscp1a	96	67.241	Stegastes_partitus
ENSFDAG00000021056	LSM10	100	88.618	ENSSSCG00000038916	LSM10	100	88.618	Sus_scrofa
ENSFDAG00000021056	LSM10	99	71.311	ENSTGUG00000001602	-	100	71.311	Taeniopygia_guttata
ENSFDAG00000021056	LSM10	99	70.492	ENSTGUG00000001600	-	100	70.492	Taeniopygia_guttata
ENSFDAG00000021056	LSM10	97	68.067	ENSTRUG00000010531	oscp1a	96	68.067	Takifugu_rubripes
ENSFDAG00000021056	LSM10	100	88.618	ENSTBEG00000016674	LSM10	100	88.618	Tupaia_belangeri
ENSFDAG00000021056	LSM10	100	91.870	ENSUAMG00000020265	LSM10	100	91.870	Ursus_americanus
ENSFDAG00000021056	LSM10	100	91.870	ENSUMAG00000001438	LSM10	57	91.870	Ursus_maritimus
ENSFDAG00000021056	LSM10	100	92.683	ENSVVUG00000023209	LSM10	100	92.683	Vulpes_vulpes
ENSFDAG00000021056	LSM10	100	71.545	ENSXETG00000027631	lsm10	100	71.545	Xenopus_tropicalis
ENSFDAG00000021056	LSM10	96	63.559	ENSXCOG00000018776	oscp1a	74	63.559	Xiphophorus_couchianus
ENSFDAG00000021056	LSM10	95	63.333	ENSXMAG00000019963	oscp1a	96	63.333	Xiphophorus_maculatus