EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFDAG00000021067 (Gene tree)
Gene ID: 104864540
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Fukomys_damarensis
Status: putative
Strand: Minus strand
Length: 2799 bases
Position: chrKN122240.1:2383168-2385966
Accession: 104864540
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFDAP00000022747	RRM_1	PF00076.22	7.6e-17	1	1
ENSFDAP00000022748	RRM_1	PF00076.22	8.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFDAT00000009565	PABPN1L-201	840	-	ENSFDAP00000022748	280 (aa)	-	-
ENSFDAT00000027607	PABPN1L-202	1559	XM_010627544	ENSFDAP00000022747	272 (aa)	XP_010625846	UPI00053FB594

Gene Model

Click here to download ENSFDAG00000021067's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFDAG00000021067's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFDAG00000021067	PABPN1L	60	54.386	ENSFDAG00000018381	BCL2L2-PABPN1	99	51.977

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFDAG00000021067	PABPN1L	100	68.345	ENSG00000205022	PABPN1L	100	69.534	Homo_sapiens
ENSFDAG00000021067	PABPN1L	56	55.128	ENSAPOG00000000685	PABPN1L	50	55.128	Acanthochromis_polyacanthus
ENSFDAG00000021067	PABPN1L	60	50.920	ENSAOCG00000019844	PABPN1L	58	54.717	Amphiprion_ocellaris
ENSFDAG00000021067	PABPN1L	60	50.920	ENSAPEG00000019534	PABPN1L	58	54.717	Amphiprion_percula
ENSFDAG00000021067	PABPN1L	59	52.121	ENSATEG00000011646	PABPN1L	63	53.892	Anabas_testudineus
ENSFDAG00000021067	PABPN1L	71	54.639	ENSACAG00000013250	PABPN1L	99	54.639	Anolis_carolinensis
ENSFDAG00000021067	PABPN1L	100	66.426	ENSANAG00000038178	PABPN1L	100	67.148	Aotus_nancymaae
ENSFDAG00000021067	PABPN1L	62	51.479	ENSACLG00000025147	PABPN1L	58	54.140	Astatotilapia_calliptera
ENSFDAG00000021067	PABPN1L	55	55.705	ENSAMXG00000010873	PABPN1L	58	56.774	Astyanax_mexicanus
ENSFDAG00000021067	PABPN1L	53	71.724	ENSBTAG00000006727	-	88	71.724	Bos_taurus
ENSFDAG00000021067	PABPN1L	100	64.643	ENSBTAG00000023752	-	100	65.950	Bos_taurus
ENSFDAG00000021067	PABPN1L	100	67.148	ENSCJAG00000045284	PABPN1L	100	67.148	Callithrix_jacchus
ENSFDAG00000021067	PABPN1L	100	62.544	ENSCHIG00000013987	PABPN1L	100	61.131	Capra_hircus
ENSFDAG00000021067	PABPN1L	97	77.206	ENSCAPG00000007240	PABPN1L	100	77.941	Cavia_aperea
ENSFDAG00000021067	PABPN1L	100	81.319	ENSCPOG00000025951	PABPN1L	100	82.051	Cavia_porcellus
ENSFDAG00000021067	PABPN1L	100	69.675	ENSCCAG00000027631	PABPN1L	100	70.397	Cebus_capucinus
ENSFDAG00000021067	PABPN1L	100	69.091	ENSCATG00000031060	PABPN1L	100	70.290	Cercocebus_atys
ENSFDAG00000021067	PABPN1L	100	83.088	ENSCLAG00000000704	PABPN1L	100	83.088	Chinchilla_lanigera
ENSFDAG00000021067	PABPN1L	100	65.753	ENSCSAG00000002881	PABPN1L	100	67.466	Chlorocebus_sabaeus
ENSFDAG00000021067	PABPN1L	71	54.082	ENSCPBG00000023441	PABPN1L	61	54.082	Chrysemys_picta_bellii
ENSFDAG00000021067	PABPN1L	100	67.029	ENSCANG00000039336	PABPN1L	100	68.231	Colobus_angolensis_palliatus
ENSFDAG00000021067	PABPN1L	100	69.091	ENSCGRG00001013211	Pabpn1l	100	69.091	Cricetulus_griseus_chok1gshd
ENSFDAG00000021067	PABPN1L	100	69.091	ENSCGRG00000015868	Pabpn1l	100	69.091	Cricetulus_griseus_crigri
ENSFDAG00000021067	PABPN1L	60	51.534	ENSCVAG00000015547	PABPN1L	58	55.975	Cyprinodon_variegatus
ENSFDAG00000021067	PABPN1L	100	54.448	ENSDNOG00000034677	PABPN1L	100	56.738	Dasypus_novemcinctus
ENSFDAG00000021067	PABPN1L	100	69.091	ENSEASG00005000777	PABPN1L	100	68.000	Equus_asinus_asinus
ENSFDAG00000021067	PABPN1L	100	69.455	ENSECAG00000000378	PABPN1L	100	68.364	Equus_caballus
ENSFDAG00000021067	PABPN1L	100	56.985	ENSEEUG00000004747	PABPN1L	100	56.985	Erinaceus_europaeus
ENSFDAG00000021067	PABPN1L	55	55.333	ENSELUG00000018385	PABPN1L	58	55.769	Esox_lucius
ENSFDAG00000021067	PABPN1L	100	68.817	ENSFCAG00000010465	PABPN1L	100	68.817	Felis_catus
ENSFDAG00000021067	PABPN1L	72	54.726	ENSFALG00000003319	PABPN1L	80	52.683	Ficedula_albicollis
ENSFDAG00000021067	PABPN1L	60	50.920	ENSFHEG00000018295	PABPN1L	58	55.696	Fundulus_heteroclitus
ENSFDAG00000021067	PABPN1L	60	59.509	ENSGALG00000006242	PABPN1L	99	56.571	Gallus_gallus
ENSFDAG00000021067	PABPN1L	60	52.147	ENSGAFG00000012565	PABPN1L	58	55.975	Gambusia_affinis
ENSFDAG00000021067	PABPN1L	60	49.112	ENSGACG00000015428	PABPN1L	59	52.761	Gasterosteus_aculeatus
ENSFDAG00000021067	PABPN1L	72	52.736	ENSGAGG00000010613	PABPN1L	59	55.556	Gopherus_agassizii
ENSFDAG00000021067	PABPN1L	100	68.727	ENSGGOG00000012670	PABPN1L	100	69.928	Gorilla_gorilla
ENSFDAG00000021067	PABPN1L	62	51.190	ENSHBUG00000002388	PABPN1L	58	55.346	Haplochromis_burtoni
ENSFDAG00000021067	PABPN1L	96	85.385	ENSHGLG00000014207	PABPN1L	96	84.861	Heterocephalus_glaber_female
ENSFDAG00000021067	PABPN1L	96	85.385	ENSHGLG00100005230	PABPN1L	96	84.861	Heterocephalus_glaber_male
ENSFDAG00000021067	PABPN1L	63	47.093	ENSHCOG00000004151	PABPN1L	59	54.717	Hippocampus_comes
ENSFDAG00000021067	PABPN1L	55	52.903	ENSIPUG00000023583	PABPN1L	79	54.167	Ictalurus_punctatus
ENSFDAG00000021067	PABPN1L	99	70.758	ENSSTOG00000020814	PABPN1L	100	67.241	Ictidomys_tridecemlineatus
ENSFDAG00000021067	PABPN1L	100	67.273	ENSJJAG00000006433	Pabpn1l	100	65.455	Jaculus_jaculus
ENSFDAG00000021067	PABPN1L	60	49.383	ENSLBEG00000011647	PABPN1L	56	53.459	Labrus_bergylta
ENSFDAG00000021067	PABPN1L	71	64.286	ENSLAFG00000025902	-	78	62.245	Loxodonta_africana
ENSFDAG00000021067	PABPN1L	100	68.727	ENSMFAG00000002924	PABPN1L	100	69.928	Macaca_fascicularis
ENSFDAG00000021067	PABPN1L	100	68.000	ENSMMUG00000012438	PABPN1L	100	69.203	Macaca_mulatta
ENSFDAG00000021067	PABPN1L	100	68.727	ENSMNEG00000044808	PABPN1L	100	69.928	Macaca_nemestrina
ENSFDAG00000021067	PABPN1L	100	69.091	ENSMLEG00000032667	PABPN1L	100	70.290	Mandrillus_leucophaeus
ENSFDAG00000021067	PABPN1L	62	51.479	ENSMZEG00005002186	PABPN1L	58	54.140	Maylandia_zebra
ENSFDAG00000021067	PABPN1L	100	67.279	ENSMAUG00000014032	Pabpn1l	100	68.015	Mesocricetus_auratus
ENSFDAG00000021067	PABPN1L	100	70.182	ENSMICG00000028179	PABPN1L	100	70.182	Microcebus_murinus
ENSFDAG00000021067	PABPN1L	100	67.279	ENSMOCG00000007955	Pabpn1l	100	67.279	Microtus_ochrogaster
ENSFDAG00000021067	PABPN1L	100	52.899	ENSMODG00000003873	-	100	50.725	Monodelphis_domestica
ENSFDAG00000021067	PABPN1L	62	50.595	ENSMALG00000016926	PABPN1L	58	54.430	Monopterus_albus
ENSFDAG00000021067	PABPN1L	100	66.788	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	66.788	Mus_caroli
ENSFDAG00000021067	PABPN1L	100	67.518	ENSMUSG00000069867	Pabpn1l	100	67.518	Mus_musculus
ENSFDAG00000021067	PABPN1L	100	66.788	MGP_PahariEiJ_G0023268	Pabpn1l	100	66.788	Mus_pahari
ENSFDAG00000021067	PABPN1L	100	67.518	MGP_SPRETEiJ_G0032788	Pabpn1l	100	67.518	Mus_spretus
ENSFDAG00000021067	PABPN1L	96	52.593	ENSMLUG00000003228	PABPN1L	75	60.377	Myotis_lucifugus
ENSFDAG00000021067	PABPN1L	100	72.059	ENSNGAG00000023992	Pabpn1l	100	72.059	Nannospalax_galili
ENSFDAG00000021067	PABPN1L	100	68.132	ENSOPRG00000005597	PABPN1L	100	68.132	Ochotona_princeps
ENSFDAG00000021067	PABPN1L	100	72.125	ENSODEG00000004649	PABPN1L	100	71.579	Octodon_degus
ENSFDAG00000021067	PABPN1L	100	51.282	ENSOANG00000013901	PABPN1L	100	51.087	Ornithorhynchus_anatinus
ENSFDAG00000021067	PABPN1L	62	52.976	ENSORLG00000026560	PABPN1L	58	55.128	Oryzias_latipes
ENSFDAG00000021067	PABPN1L	62	52.976	ENSORLG00020015068	PABPN1L	58	55.128	Oryzias_latipes_hni
ENSFDAG00000021067	PABPN1L	62	52.976	ENSORLG00015000397	PABPN1L	58	55.128	Oryzias_latipes_hsok
ENSFDAG00000021067	PABPN1L	100	67.636	ENSOGAG00000000433	PABPN1L	100	68.727	Otolemur_garnettii
ENSFDAG00000021067	PABPN1L	100	61.386	ENSOARG00000013682	PABPN1L	100	63.366	Ovis_aries
ENSFDAG00000021067	PABPN1L	100	67.986	ENSPPAG00000028866	PABPN1L	100	69.176	Pan_paniscus
ENSFDAG00000021067	PABPN1L	100	69.534	ENSPPRG00000015106	PABPN1L	100	69.534	Panthera_pardus
ENSFDAG00000021067	PABPN1L	93	63.035	ENSPTIG00000015606	PABPN1L	98	63.241	Panthera_tigris_altaica
ENSFDAG00000021067	PABPN1L	100	67.986	ENSPTRG00000031120	PABPN1L	100	69.176	Pan_troglodytes
ENSFDAG00000021067	PABPN1L	100	68.727	ENSPANG00000026039	PABPN1L	100	69.928	Papio_anubis
ENSFDAG00000021067	PABPN1L	59	56.364	ENSPSIG00000003404	PABPN1L	100	54.229	Pelodiscus_sinensis
ENSFDAG00000021067	PABPN1L	51	54.730	ENSPMGG00000013927	PABPN1L	62	66.981	Periophthalmus_magnuspinnatus
ENSFDAG00000021067	PABPN1L	100	68.382	ENSPEMG00000016624	Pabpn1l	100	68.382	Peromyscus_maniculatus_bairdii
ENSFDAG00000021067	PABPN1L	52	60.839	ENSPCIG00000007038	-	99	58.741	Phascolarctos_cinereus
ENSFDAG00000021067	PABPN1L	60	52.147	ENSPFOG00000007001	PABPN1L	76	45.178	Poecilia_formosa
ENSFDAG00000021067	PABPN1L	60	52.147	ENSPLAG00000018431	PABPN1L	58	55.975	Poecilia_latipinna
ENSFDAG00000021067	PABPN1L	60	52.147	ENSPMEG00000009108	PABPN1L	58	55.975	Poecilia_mexicana
ENSFDAG00000021067	PABPN1L	100	68.345	ENSPPYG00000007655	PABPN1L	100	70.251	Pongo_abelii
ENSFDAG00000021067	PABPN1L	100	68.364	ENSPCOG00000024077	PABPN1L	100	68.727	Propithecus_coquereli
ENSFDAG00000021067	PABPN1L	100	66.667	ENSPVAG00000002716	PABPN1L	100	67.730	Pteropus_vampyrus
ENSFDAG00000021067	PABPN1L	62	51.479	ENSPNYG00000004803	PABPN1L	58	54.140	Pundamilia_nyererei
ENSFDAG00000021067	PABPN1L	100	70.956	ENSRNOG00000029558	Pabpn1l	100	70.956	Rattus_norvegicus
ENSFDAG00000021067	PABPN1L	100	70.182	ENSRBIG00000030740	PABPN1L	100	71.377	Rhinopithecus_bieti
ENSFDAG00000021067	PABPN1L	99	68.248	ENSRROG00000035483	-	99	69.818	Rhinopithecus_roxellana
ENSFDAG00000021067	PABPN1L	100	68.841	ENSRROG00000032240	-	100	70.290	Rhinopithecus_roxellana
ENSFDAG00000021067	PABPN1L	100	68.116	ENSSBOG00000018410	PABPN1L	100	69.314	Saimiri_boliviensis_boliviensis
ENSFDAG00000021067	PABPN1L	100	51.027	ENSSHAG00000010001	-	100	47.241	Sarcophilus_harrisii
ENSFDAG00000021067	PABPN1L	60	50.307	ENSSMAG00000021348	PABPN1L	57	54.777	Scophthalmus_maximus
ENSFDAG00000021067	PABPN1L	60	49.693	ENSSDUG00000006986	PABPN1L	58	54.088	Seriola_dumerili
ENSFDAG00000021067	PABPN1L	60	49.693	ENSSLDG00000021845	PABPN1L	58	54.088	Seriola_lalandi_dorsalis
ENSFDAG00000021067	PABPN1L	94	48.438	ENSSARG00000005178	-	99	45.353	Sorex_araneus
ENSFDAG00000021067	PABPN1L	71	55.959	ENSSPUG00000007031	PABPN1L	84	54.639	Sphenodon_punctatus
ENSFDAG00000021067	PABPN1L	74	46.860	ENSSPAG00000017978	PABPN1L	59	52.469	Stegastes_partitus
ENSFDAG00000021067	PABPN1L	100	60.714	ENSSSCG00000036367	PABPN1L	100	67.883	Sus_scrofa
ENSFDAG00000021067	PABPN1L	60	50.909	ENSTRUG00000024725	PABPN1L	65	53.797	Takifugu_rubripes
ENSFDAG00000021067	PABPN1L	100	62.590	ENSTTRG00000004691	PABPN1L	100	65.950	Tursiops_truncatus
ENSFDAG00000021067	PABPN1L	62	46.667	ENSXETG00000011258	pabpn1l	88	47.917	Xenopus_tropicalis